Experiment: Laval1261
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02322 and ECD_02323 overlap by 11 nucleotides ECD_02323 and ECD_02324 overlap by 1 nucleotides ECD_02324 and ECD_02325 overlap by 1 nucleotides
ECD_02322: ECD_02322 - sulfate/thiosulfate transporter subunit, at 2,412,120 to 2,413,217
_02322
ECD_02323: ECD_02323 - sulfate/thiosulfate ABC transporter permease, at 2,413,207 to 2,414,082
_02323
ECD_02324: ECD_02324 - sulfate/thiosulfate ABC transporter permease, at 2,414,082 to 2,414,915
_02324
ECD_02325: ECD_02325 - thiosulfate-binding protein, at 2,414,915 to 2,415,931
_02325
Position (kb)
2414
2415 Strain fitness (log2 ratio)
-2
-1
0
1 at 2413.194 kb on - strand at 2413.194 kb on - strand at 2413.194 kb on - strand at 2413.194 kb on - strand at 2413.197 kb on - strand at 2413.294 kb on - strand at 2413.500 kb on + strand, within ECD_02323 at 2413.573 kb on + strand, within ECD_02323 at 2413.574 kb on - strand, within ECD_02323 at 2413.656 kb on + strand, within ECD_02323 at 2413.668 kb on + strand, within ECD_02323 at 2413.669 kb on - strand, within ECD_02323 at 2413.721 kb on + strand, within ECD_02323 at 2413.721 kb on + strand, within ECD_02323 at 2413.722 kb on - strand, within ECD_02323 at 2413.722 kb on - strand, within ECD_02323 at 2413.965 kb on - strand, within ECD_02323 at 2414.092 kb on - strand at 2414.092 kb on - strand at 2414.127 kb on - strand at 2414.265 kb on - strand, within ECD_02324 at 2414.419 kb on - strand, within ECD_02324 at 2414.777 kb on - strand, within ECD_02324 at 2414.877 kb on - strand at 2414.946 kb on - strand at 2414.946 kb on - strand at 2415.081 kb on + strand, within ECD_02325 at 2415.097 kb on + strand, within ECD_02325 at 2415.098 kb on - strand, within ECD_02325 at 2415.250 kb on - strand, within ECD_02325 at 2415.250 kb on - strand, within ECD_02325 at 2415.382 kb on + strand, within ECD_02325 at 2415.451 kb on + strand, within ECD_02325 at 2415.451 kb on + strand, within ECD_02325 at 2415.452 kb on - strand, within ECD_02325 at 2415.452 kb on - strand, within ECD_02325 at 2415.452 kb on - strand, within ECD_02325 at 2415.452 kb on - strand, within ECD_02325 at 2415.454 kb on - strand, within ECD_02325 at 2415.590 kb on - strand, within ECD_02325 at 2415.590 kb on - strand, within ECD_02325 at 2415.654 kb on - strand, within ECD_02325 at 2415.671 kb on - strand, within ECD_02325 at 2415.671 kb on - strand, within ECD_02325 at 2415.671 kb on - strand, within ECD_02325 at 2415.672 kb on + strand, within ECD_02325 at 2415.672 kb on + strand, within ECD_02325 at 2415.673 kb on - strand, within ECD_02325 at 2415.834 kb on + strand at 2415.834 kb on + strand at 2415.864 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1261 remove 2,413,194 - +1.1 2,413,194 - +0.3 2,413,194 - +0.4 2,413,194 - +0.5 2,413,197 - +1.2 2,413,294 - -0.2 2,413,500 + ECD_02323 0.33 +0.5 2,413,573 + ECD_02323 0.42 -0.1 2,413,574 - ECD_02323 0.42 -0.2 2,413,656 + ECD_02323 0.51 +0.6 2,413,668 + ECD_02323 0.53 -0.5 2,413,669 - ECD_02323 0.53 -0.1 2,413,721 + ECD_02323 0.59 +0.7 2,413,721 + ECD_02323 0.59 +0.3 2,413,722 - ECD_02323 0.59 -0.3 2,413,722 - ECD_02323 0.59 -0.8 2,413,965 - ECD_02323 0.87 -0.2 2,414,092 - -0.0 2,414,092 - -0.1 2,414,127 - +0.6 2,414,265 - ECD_02324 0.22 +0.9 2,414,419 - ECD_02324 0.40 +0.2 2,414,777 - ECD_02324 0.83 +0.5 2,414,877 - +0.9 2,414,946 - +0.4 2,414,946 - -0.2 2,415,081 + ECD_02325 0.16 +0.6 2,415,097 + ECD_02325 0.18 -1.8 2,415,098 - ECD_02325 0.18 +0.3 2,415,250 - ECD_02325 0.33 +0.6 2,415,250 - ECD_02325 0.33 +0.6 2,415,382 + ECD_02325 0.46 -0.1 2,415,451 + ECD_02325 0.53 +1.2 2,415,451 + ECD_02325 0.53 +0.2 2,415,452 - ECD_02325 0.53 -0.0 2,415,452 - ECD_02325 0.53 -0.2 2,415,452 - ECD_02325 0.53 +0.1 2,415,452 - ECD_02325 0.53 -0.1 2,415,454 - ECD_02325 0.53 +0.2 2,415,590 - ECD_02325 0.66 -0.5 2,415,590 - ECD_02325 0.66 -0.3 2,415,654 - ECD_02325 0.73 -1.2 2,415,671 - ECD_02325 0.74 -0.0 2,415,671 - ECD_02325 0.74 -0.2 2,415,671 - ECD_02325 0.74 -0.6 2,415,672 + ECD_02325 0.74 -0.6 2,415,672 + ECD_02325 0.74 -0.3 2,415,673 - ECD_02325 0.75 +1.2 2,415,834 + +0.8 2,415,834 + -0.4 2,415,864 - +0.6
Or see this region's nucleotide sequence