Strain Fitness in Escherichia coli BL21 around ECD_02324

Experiment: Laval1261

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02322 and ECD_02323 overlap by 11 nucleotidesECD_02323 and ECD_02324 overlap by 1 nucleotidesECD_02324 and ECD_02325 overlap by 1 nucleotides ECD_02322: ECD_02322 - sulfate/thiosulfate transporter subunit, at 2,412,120 to 2,413,217 _02322 ECD_02323: ECD_02323 - sulfate/thiosulfate ABC transporter permease, at 2,413,207 to 2,414,082 _02323 ECD_02324: ECD_02324 - sulfate/thiosulfate ABC transporter permease, at 2,414,082 to 2,414,915 _02324 ECD_02325: ECD_02325 - thiosulfate-binding protein, at 2,414,915 to 2,415,931 _02325 Position (kb) 2414 2415Strain fitness (log2 ratio) -2 -1 0 1at 2413.194 kb on - strandat 2413.194 kb on - strandat 2413.194 kb on - strandat 2413.194 kb on - strandat 2413.197 kb on - strandat 2413.294 kb on - strandat 2413.500 kb on + strand, within ECD_02323at 2413.573 kb on + strand, within ECD_02323at 2413.574 kb on - strand, within ECD_02323at 2413.656 kb on + strand, within ECD_02323at 2413.668 kb on + strand, within ECD_02323at 2413.669 kb on - strand, within ECD_02323at 2413.721 kb on + strand, within ECD_02323at 2413.721 kb on + strand, within ECD_02323at 2413.722 kb on - strand, within ECD_02323at 2413.722 kb on - strand, within ECD_02323at 2413.965 kb on - strand, within ECD_02323at 2414.092 kb on - strandat 2414.092 kb on - strandat 2414.127 kb on - strandat 2414.265 kb on - strand, within ECD_02324at 2414.419 kb on - strand, within ECD_02324at 2414.777 kb on - strand, within ECD_02324at 2414.877 kb on - strandat 2414.946 kb on - strandat 2414.946 kb on - strandat 2415.081 kb on + strand, within ECD_02325at 2415.097 kb on + strand, within ECD_02325at 2415.098 kb on - strand, within ECD_02325at 2415.250 kb on - strand, within ECD_02325at 2415.250 kb on - strand, within ECD_02325at 2415.382 kb on + strand, within ECD_02325at 2415.451 kb on + strand, within ECD_02325at 2415.451 kb on + strand, within ECD_02325at 2415.452 kb on - strand, within ECD_02325at 2415.452 kb on - strand, within ECD_02325at 2415.452 kb on - strand, within ECD_02325at 2415.452 kb on - strand, within ECD_02325at 2415.454 kb on - strand, within ECD_02325at 2415.590 kb on - strand, within ECD_02325at 2415.590 kb on - strand, within ECD_02325at 2415.654 kb on - strand, within ECD_02325at 2415.671 kb on - strand, within ECD_02325at 2415.671 kb on - strand, within ECD_02325at 2415.671 kb on - strand, within ECD_02325at 2415.672 kb on + strand, within ECD_02325at 2415.672 kb on + strand, within ECD_02325at 2415.673 kb on - strand, within ECD_02325at 2415.834 kb on + strandat 2415.834 kb on + strandat 2415.864 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1261
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2,413,194 - +1.1
2,413,194 - +0.3
2,413,194 - +0.4
2,413,194 - +0.5
2,413,197 - +1.2
2,413,294 - -0.2
2,413,500 + ECD_02323 0.33 +0.5
2,413,573 + ECD_02323 0.42 -0.1
2,413,574 - ECD_02323 0.42 -0.2
2,413,656 + ECD_02323 0.51 +0.6
2,413,668 + ECD_02323 0.53 -0.5
2,413,669 - ECD_02323 0.53 -0.1
2,413,721 + ECD_02323 0.59 +0.7
2,413,721 + ECD_02323 0.59 +0.3
2,413,722 - ECD_02323 0.59 -0.3
2,413,722 - ECD_02323 0.59 -0.8
2,413,965 - ECD_02323 0.87 -0.2
2,414,092 - -0.0
2,414,092 - -0.1
2,414,127 - +0.6
2,414,265 - ECD_02324 0.22 +0.9
2,414,419 - ECD_02324 0.40 +0.2
2,414,777 - ECD_02324 0.83 +0.5
2,414,877 - +0.9
2,414,946 - +0.4
2,414,946 - -0.2
2,415,081 + ECD_02325 0.16 +0.6
2,415,097 + ECD_02325 0.18 -1.8
2,415,098 - ECD_02325 0.18 +0.3
2,415,250 - ECD_02325 0.33 +0.6
2,415,250 - ECD_02325 0.33 +0.6
2,415,382 + ECD_02325 0.46 -0.1
2,415,451 + ECD_02325 0.53 +1.2
2,415,451 + ECD_02325 0.53 +0.2
2,415,452 - ECD_02325 0.53 -0.0
2,415,452 - ECD_02325 0.53 -0.2
2,415,452 - ECD_02325 0.53 +0.1
2,415,452 - ECD_02325 0.53 -0.1
2,415,454 - ECD_02325 0.53 +0.2
2,415,590 - ECD_02325 0.66 -0.5
2,415,590 - ECD_02325 0.66 -0.3
2,415,654 - ECD_02325 0.73 -1.2
2,415,671 - ECD_02325 0.74 -0.0
2,415,671 - ECD_02325 0.74 -0.2
2,415,671 - ECD_02325 0.74 -0.6
2,415,672 + ECD_02325 0.74 -0.6
2,415,672 + ECD_02325 0.74 -0.3
2,415,673 - ECD_02325 0.75 +1.2
2,415,834 + +0.8
2,415,834 + -0.4
2,415,864 - +0.6

Or see this region's nucleotide sequence