Strain Fitness in Escherichia coli BL21 around ECD_02310

Experiment: Laval1261

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02309 and ECD_02310 overlap by 4 nucleotidesECD_02310 and ECD_02311 are separated by 1 nucleotides ECD_02309: ECD_02309 - putative inorganic ion transporter, at 2,399,333 to 2,400,331 _02309 ECD_02310: ECD_02310 - DUF3820 family protein, at 2,400,328 to 2,400,546 _02310 ECD_02311: ECD_02311 - DNA ligase, NAD(+)-dependent, at 2,400,548 to 2,402,563 _02311 Position (kb) 2400 2401Strain fitness (log2 ratio) -1 0 1at 2399.473 kb on + strand, within ECD_02309at 2399.643 kb on - strand, within ECD_02309at 2399.957 kb on + strand, within ECD_02309at 2399.959 kb on + strand, within ECD_02309at 2400.067 kb on - strand, within ECD_02309at 2400.071 kb on - strand, within ECD_02309at 2400.294 kb on + strandat 2400.401 kb on - strand, within ECD_02310at 2400.456 kb on - strand, within ECD_02310

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1261
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2,399,473 + ECD_02309 0.14 +0.5
2,399,643 - ECD_02309 0.31 +0.5
2,399,957 + ECD_02309 0.62 +0.1
2,399,959 + ECD_02309 0.63 +0.2
2,400,067 - ECD_02309 0.73 -0.2
2,400,071 - ECD_02309 0.74 +1.2
2,400,294 + -0.4
2,400,401 - ECD_02310 0.33 -0.0
2,400,456 - ECD_02310 0.58 +0.6

Or see this region's nucleotide sequence