Strain Fitness in Escherichia coli BL21 around ECD_02297

Experiment: Laval1261

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02296 and ECD_02297 are separated by 21 nucleotidesECD_02297 and ECD_02298 are separated by 218 nucleotides ECD_02296: ECD_02296 - putative enzyme IIC component of PTS, at 2,384,533 to 2,385,780 _02296 ECD_02297: ECD_02297 - putative enzyme IIB component of PTS, at 2,385,802 to 2,386,128 _02297 ECD_02298: ECD_02298 - glucokinase, at 2,386,347 to 2,387,312 _02298 Position (kb) 2385 2386 2387Strain fitness (log2 ratio) -2 -1 0 1 2at 2384.925 kb on + strand, within ECD_02296at 2384.959 kb on + strand, within ECD_02296at 2385.057 kb on - strand, within ECD_02296at 2385.096 kb on + strand, within ECD_02296at 2385.097 kb on - strand, within ECD_02296at 2385.141 kb on - strand, within ECD_02296at 2385.141 kb on - strand, within ECD_02296at 2385.143 kb on + strand, within ECD_02296at 2385.144 kb on - strand, within ECD_02296at 2385.144 kb on - strand, within ECD_02296at 2385.144 kb on - strand, within ECD_02296at 2385.144 kb on - strand, within ECD_02296at 2385.273 kb on + strand, within ECD_02296at 2385.274 kb on - strand, within ECD_02296at 2385.327 kb on + strand, within ECD_02296at 2385.505 kb on + strand, within ECD_02296at 2385.540 kb on + strand, within ECD_02296at 2385.541 kb on - strand, within ECD_02296at 2385.586 kb on - strand, within ECD_02296at 2385.586 kb on - strand, within ECD_02296at 2385.632 kb on - strand, within ECD_02296at 2385.804 kb on - strandat 2385.928 kb on - strand, within ECD_02297at 2386.071 kb on + strand, within ECD_02297at 2386.106 kb on - strandat 2386.106 kb on - strandat 2386.106 kb on - strandat 2386.204 kb on + strandat 2386.204 kb on + strandat 2386.204 kb on + strandat 2386.464 kb on - strand, within ECD_02298at 2386.593 kb on - strand, within ECD_02298at 2386.662 kb on - strand, within ECD_02298at 2386.717 kb on + strand, within ECD_02298at 2386.932 kb on - strand, within ECD_02298

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1261
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2,384,925 + ECD_02296 0.31 +0.4
2,384,959 + ECD_02296 0.34 +0.5
2,385,057 - ECD_02296 0.42 +1.1
2,385,096 + ECD_02296 0.45 +0.6
2,385,097 - ECD_02296 0.45 +0.7
2,385,141 - ECD_02296 0.49 -0.0
2,385,141 - ECD_02296 0.49 -0.1
2,385,143 + ECD_02296 0.49 +0.1
2,385,144 - ECD_02296 0.49 +0.7
2,385,144 - ECD_02296 0.49 -0.1
2,385,144 - ECD_02296 0.49 +0.9
2,385,144 - ECD_02296 0.49 +1.4
2,385,273 + ECD_02296 0.59 +0.0
2,385,274 - ECD_02296 0.59 -2.0
2,385,327 + ECD_02296 0.64 +0.5
2,385,505 + ECD_02296 0.78 -0.9
2,385,540 + ECD_02296 0.81 +0.1
2,385,541 - ECD_02296 0.81 +0.2
2,385,586 - ECD_02296 0.84 +0.8
2,385,586 - ECD_02296 0.84 +1.4
2,385,632 - ECD_02296 0.88 +0.4
2,385,804 - +0.0
2,385,928 - ECD_02297 0.39 +0.4
2,386,071 + ECD_02297 0.82 +1.9
2,386,106 - -0.5
2,386,106 - +0.5
2,386,106 - +0.5
2,386,204 + -0.2
2,386,204 + -1.0
2,386,204 + +0.5
2,386,464 - ECD_02298 0.12 -1.2
2,386,593 - ECD_02298 0.25 -0.4
2,386,662 - ECD_02298 0.33 +0.1
2,386,717 + ECD_02298 0.38 -0.2
2,386,932 - ECD_02298 0.61 -1.7

Or see this region's nucleotide sequence