Strain Fitness in Escherichia coli BL21 around ECD_02093

Experiment: Laval1261

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02091 and ECD_02092 are separated by 168 nucleotidesECD_02092 and ECD_02093 are separated by 70 nucleotidesECD_02093 and ECD_02094 are separated by 93 nucleotides ECD_02091: ECD_02091 - ribonucleoside hydrolase 2, at 2,149,093 to 2,150,034 _02091 ECD_02092: ECD_02092 - putative transcriptional regulator, at 2,150,203 to 2,150,862 _02092 ECD_02093: ECD_02093 - putative nucleoside transporter, at 2,150,933 to 2,152,183 _02093 ECD_02094: ECD_02094 - pseudouridine 5'-phosphate glycosidase, at 2,152,277 to 2,153,215 _02094 Position (kb) 2150 2151 2152 2153Strain fitness (log2 ratio) -1 0 1at 2150.111 kb on + strandat 2151.399 kb on - strand, within ECD_02093at 2151.530 kb on - strand, within ECD_02093at 2151.899 kb on - strand, within ECD_02093at 2151.978 kb on + strand, within ECD_02093at 2152.016 kb on + strand, within ECD_02093at 2152.176 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1261
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2,150,111 + +0.6
2,151,399 - ECD_02093 0.37 +0.6
2,151,530 - ECD_02093 0.48 +0.1
2,151,899 - ECD_02093 0.77 +1.5
2,151,978 + ECD_02093 0.84 +1.4
2,152,016 + ECD_02093 0.87 -0.5
2,152,176 - +0.4

Or see this region's nucleotide sequence