Strain Fitness in Escherichia coli BL21 around ECD_01786

Experiment: Laval1261

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01785 and ECD_01786 are separated by 3 nucleotidesECD_01786 and ECD_01787 are separated by 462 nucleotides ECD_01785: ECD_01785 - putative membrane-anchored cyclic-di-GMP phosphodiesterase, regulator of cellulose production, at 1,844,154 to 1,845,752 _01785 ECD_01786: ECD_01786 - putative membrane protein/conserved protein, at 1,845,756 to 1,847,312 _01786 ECD_01787: ECD_01787 - fused mannose-specific PTS enzymes: IIA component/IIB component, at 1,847,775 to 1,848,746 _01787 Position (kb) 1845 1846 1847 1848Strain fitness (log2 ratio) -3 -2 -1 0 1at 1844.871 kb on + strand, within ECD_01785at 1845.024 kb on - strand, within ECD_01785at 1845.045 kb on - strand, within ECD_01785at 1845.448 kb on + strand, within ECD_01785at 1845.449 kb on - strand, within ECD_01785at 1845.758 kb on - strandat 1845.853 kb on - strandat 1846.099 kb on - strand, within ECD_01786at 1846.306 kb on - strand, within ECD_01786at 1846.454 kb on - strand, within ECD_01786at 1846.608 kb on - strand, within ECD_01786at 1846.812 kb on - strand, within ECD_01786at 1847.684 kb on + strandat 1847.760 kb on + strandat 1847.794 kb on + strandat 1847.951 kb on + strand, within ECD_01787at 1847.975 kb on + strand, within ECD_01787

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1261
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1,844,871 + ECD_01785 0.45 +0.1
1,845,024 - ECD_01785 0.54 +0.4
1,845,045 - ECD_01785 0.56 +0.3
1,845,448 + ECD_01785 0.81 +0.7
1,845,449 - ECD_01785 0.81 +0.5
1,845,758 - +0.0
1,845,853 - +0.9
1,846,099 - ECD_01786 0.22 +0.6
1,846,306 - ECD_01786 0.35 +0.4
1,846,454 - ECD_01786 0.45 +0.2
1,846,608 - ECD_01786 0.55 +1.2
1,846,812 - ECD_01786 0.68 +0.7
1,847,684 + -0.4
1,847,760 + -0.6
1,847,794 + -3.1
1,847,951 + ECD_01787 0.18 +0.0
1,847,975 + ECD_01787 0.21 -0.4

Or see this region's nucleotide sequence