Experiment: Laval1261
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_01745 and ECD_01746 are separated by 369 nucleotides ECD_01746 and ECD_01747 are separated by 41 nucleotides ECD_01747 and ECD_01748 are separated by 341 nucleotides
ECD_01745: ECD_01745 - putative Zn-dependent NAD(P)-binding oxidoreductase, at 1,804,633 to 1,805,709
_01745
ECD_01746: ECD_01746 - DUF1315 family protein, at 1,806,079 to 1,806,351
_01746
ECD_01747: ECD_01747 - methionine sulfoxide reductase B, at 1,806,393 to 1,806,806
_01747
ECD_01748: ECD_01748 - glyceraldehyde-3-phosphate dehydrogenase A, at 1,807,148 to 1,808,143
_01748
Position (kb) 1806
1807 Strain fitness (log2 ratio) -1
0
1 at 1806.085 kb on - strand at 1806.112 kb on - strand, within ECD_01746 at 1806.309 kb on - strand, within ECD_01746 at 1806.311 kb on - strand, within ECD_01746 at 1806.373 kb on + strand at 1806.450 kb on - strand, within ECD_01747 at 1806.679 kb on - strand, within ECD_01747 at 1806.679 kb on - strand, within ECD_01747 at 1806.840 kb on - strand at 1807.119 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1261 remove 1,806,085 - -0.6 1,806,112 - ECD_01746 0.12 -0.5 1,806,309 - ECD_01746 0.84 -0.4 1,806,311 - ECD_01746 0.85 +0.3 1,806,373 + +0.9 1,806,450 - ECD_01747 0.14 +0.3 1,806,679 - ECD_01747 0.69 -1.2 1,806,679 - ECD_01747 0.69 -1.2 1,806,840 - -0.6 1,807,119 + -1.0
Or see this region's nucleotide sequence