Strain Fitness in Escherichia coli BL21 around ECD_01379

Experiment: Laval1261

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01378 and ECD_01379 are separated by 37 nucleotidesECD_01379 and ECD_01380 are separated by 216 nucleotides ECD_01378: ECD_01378 - methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor, at 1,446,532 to 1,448,172 _01378 ECD_01379: ECD_01379 - putative DNA-binding transcriptional regulator, at 1,448,210 to 1,449,133 _01379 ECD_01380: ECD_01380 - putative metalloenzyme, at 1,449,350 to 1,450,693 _01380 Position (kb) 1448 1449 1450Strain fitness (log2 ratio) -1 0 1at 1448.154 kb on + strandat 1448.392 kb on - strand, within ECD_01379at 1448.408 kb on - strand, within ECD_01379at 1448.933 kb on - strand, within ECD_01379at 1449.075 kb on - strandat 1449.936 kb on + strand, within ECD_01380

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1261
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1,448,154 + -0.0
1,448,392 - ECD_01379 0.20 +0.1
1,448,408 - ECD_01379 0.21 +0.5
1,448,933 - ECD_01379 0.78 +1.3
1,449,075 - -0.0
1,449,936 + ECD_01380 0.44 +0.5

Or see this region's nucleotide sequence