Strain Fitness in Escherichia coli BL21 around ECD_01314

Experiment: Laval1261

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01313 and ECD_01314 are separated by 36 nucleotidesECD_01314 and ECD_01315 overlap by 1 nucleotides ECD_01313: ECD_01313 - p-aminobenzoyl-glutamate transporter; membrane protein, at 1,385,415 to 1,386,941 _01313 ECD_01314: ECD_01314 - p-aminobenzoyl-glutamate hydrolase, B subunit, at 1,386,978 to 1,388,423 _01314 ECD_01315: ECD_01315 - p-aminobenzoyl-glutamate hydrolase, A subunit, at 1,388,423 to 1,389,733 _01315 Position (kb) 1386 1387 1388 1389Strain fitness (log2 ratio) -2 -1 0 1 2at 1386.299 kb on - strand, within ECD_01313at 1386.312 kb on + strand, within ECD_01313at 1386.397 kb on - strand, within ECD_01313at 1386.557 kb on + strand, within ECD_01313at 1386.559 kb on + strand, within ECD_01313at 1386.616 kb on - strand, within ECD_01313at 1386.720 kb on + strand, within ECD_01313at 1386.895 kb on + strandat 1387.074 kb on + strandat 1387.151 kb on + strand, within ECD_01314at 1387.151 kb on + strand, within ECD_01314at 1387.184 kb on + strand, within ECD_01314at 1387.184 kb on + strand, within ECD_01314at 1387.189 kb on - strand, within ECD_01314at 1387.742 kb on + strand, within ECD_01314at 1387.742 kb on + strand, within ECD_01314at 1388.002 kb on + strand, within ECD_01314at 1388.251 kb on - strand, within ECD_01314at 1388.757 kb on + strand, within ECD_01315at 1388.758 kb on - strand, within ECD_01315at 1388.758 kb on - strand, within ECD_01315at 1388.758 kb on - strand, within ECD_01315at 1389.222 kb on - strand, within ECD_01315

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1261
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1,386,299 - ECD_01313 0.58 +0.6
1,386,312 + ECD_01313 0.59 +0.3
1,386,397 - ECD_01313 0.64 -0.2
1,386,557 + ECD_01313 0.75 +0.7
1,386,559 + ECD_01313 0.75 -0.2
1,386,616 - ECD_01313 0.79 +0.8
1,386,720 + ECD_01313 0.85 +0.8
1,386,895 + +0.6
1,387,074 + +1.0
1,387,151 + ECD_01314 0.12 +1.2
1,387,151 + ECD_01314 0.12 -0.2
1,387,184 + ECD_01314 0.14 +1.8
1,387,184 + ECD_01314 0.14 +0.4
1,387,189 - ECD_01314 0.15 +0.8
1,387,742 + ECD_01314 0.53 +0.5
1,387,742 + ECD_01314 0.53 +0.6
1,388,002 + ECD_01314 0.71 +0.7
1,388,251 - ECD_01314 0.88 -0.9
1,388,757 + ECD_01315 0.25 -1.2
1,388,758 - ECD_01315 0.26 +2.2
1,388,758 - ECD_01315 0.26 -0.5
1,388,758 - ECD_01315 0.26 -2.6
1,389,222 - ECD_01315 0.61 +0.2

Or see this region's nucleotide sequence