Strain Fitness in Escherichia coli BL21 around ECD_01264

Experiment: Laval1261

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01263 and ECD_01264 are separated by 67 nucleotidesECD_01264 and ECD_01265 are separated by 143 nucleotides ECD_01263: ECD_01263 - ribonuclease II, at 1,333,345 to 1,335,279 _01263 ECD_01264: ECD_01264 - putative oxidoreductase, at 1,335,347 to 1,336,474 _01264 ECD_01265: ECD_01265 - enoyl-[acyl-carrier-protein] reductase, NADH-dependent, at 1,336,618 to 1,337,406 _01265 Position (kb) 1335 1336 1337Strain fitness (log2 ratio) -1 0 1at 1334.832 kb on - strand, within ECD_01263at 1334.850 kb on - strand, within ECD_01263at 1334.914 kb on - strand, within ECD_01263at 1335.203 kb on - strandat 1335.421 kb on + strandat 1335.694 kb on + strand, within ECD_01264at 1335.992 kb on + strand, within ECD_01264at 1336.054 kb on + strand, within ECD_01264at 1336.083 kb on + strand, within ECD_01264at 1336.147 kb on + strand, within ECD_01264at 1336.168 kb on + strand, within ECD_01264at 1336.168 kb on + strand, within ECD_01264at 1337.466 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1261
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1,334,832 - ECD_01263 0.77 -0.2
1,334,850 - ECD_01263 0.78 -0.1
1,334,914 - ECD_01263 0.81 +1.2
1,335,203 - -1.2
1,335,421 + +0.9
1,335,694 + ECD_01264 0.31 +0.2
1,335,992 + ECD_01264 0.57 +1.6
1,336,054 + ECD_01264 0.63 -0.2
1,336,083 + ECD_01264 0.65 -1.1
1,336,147 + ECD_01264 0.71 +0.8
1,336,168 + ECD_01264 0.73 +0.8
1,336,168 + ECD_01264 0.73 +0.8
1,337,466 - +0.2

Or see this region's nucleotide sequence