Experiment: Laval1261
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_01058 and ECD_01059 are separated by 105 nucleotides ECD_01059 and ECD_01060 are separated by 133 nucleotides ECD_01060 and ECD_01061 are separated by 63 nucleotides
ECD_01058: ECD_01058 - dihydro-orotase, at 1,124,131 to 1,125,177
_01058
ECD_01059: ECD_01059 - lipoprotein, DUF1439 family, at 1,125,283 to 1,125,843
_01059
ECD_01060: ECD_01060 - glutaredoxin 2 (Grx2), at 1,125,977 to 1,126,624
_01060
ECD_01061: ECD_01061 - multidrug resistance efflux transporter conferring overexpression resistance to norfloxacin and enoxacin, at 1,126,688 to 1,127,896
_01061
Position (kb) 1125
1126
1127 Strain fitness (log2 ratio) -1
0
1 at 1125.084 kb on - strand at 1125.387 kb on - strand, within ECD_01059 at 1125.387 kb on - strand, within ECD_01059 at 1125.387 kb on - strand, within ECD_01059 at 1125.771 kb on - strand, within ECD_01059 at 1125.787 kb on - strand, within ECD_01059 at 1126.101 kb on - strand, within ECD_01060 at 1126.186 kb on + strand, within ECD_01060 at 1126.423 kb on - strand, within ECD_01060 at 1126.452 kb on + strand, within ECD_01060 at 1126.614 kb on + strand at 1126.614 kb on + strand at 1126.614 kb on + strand at 1126.614 kb on + strand at 1126.849 kb on - strand, within ECD_01061 at 1127.151 kb on + strand, within ECD_01061 at 1127.235 kb on + strand, within ECD_01061 at 1127.236 kb on - strand, within ECD_01061 at 1127.259 kb on + strand, within ECD_01061
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1261 remove 1,125,084 - -0.3 1,125,387 - ECD_01059 0.19 -0.6 1,125,387 - ECD_01059 0.19 +0.0 1,125,387 - ECD_01059 0.19 +0.5 1,125,771 - ECD_01059 0.87 -0.2 1,125,787 - ECD_01059 0.90 -0.4 1,126,101 - ECD_01060 0.19 +0.5 1,126,186 + ECD_01060 0.32 +0.4 1,126,423 - ECD_01060 0.69 +0.0 1,126,452 + ECD_01060 0.73 +1.1 1,126,614 + -1.1 1,126,614 + -0.6 1,126,614 + +0.1 1,126,614 + +0.6 1,126,849 - ECD_01061 0.13 -0.6 1,127,151 + ECD_01061 0.38 -0.4 1,127,235 + ECD_01061 0.45 +1.3 1,127,236 - ECD_01061 0.45 -1.3 1,127,259 + ECD_01061 0.47 -0.6
Or see this region's nucleotide sequence