Experiment: Laval1261
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00566 and ECD_00567 are separated by 9 nucleotides
ECD_00566: ECD_00566 - DUF466 family protein, at 592,658 to 592,855
_00566
ECD_00567: ECD_00567 - putative oxidoreductase, at 592,865 to 593,953
_00567
Position (kb) 592
593 Strain fitness (log2 ratio) -2
-1
0
1 at 591.736 kb on + strand at 591.736 kb on + strand at 591.737 kb on - strand at 591.737 kb on - strand at 591.737 kb on - strand at 591.737 kb on - strand at 591.762 kb on + strand at 591.763 kb on - strand at 591.830 kb on + strand at 591.961 kb on + strand at 591.962 kb on - strand at 592.003 kb on - strand at 592.102 kb on + strand at 592.102 kb on + strand at 592.258 kb on + strand at 592.260 kb on + strand at 592.260 kb on + strand at 592.326 kb on + strand at 592.362 kb on + strand at 592.418 kb on - strand at 592.475 kb on - strand at 592.688 kb on + strand, within ECD_00566 at 592.739 kb on + strand, within ECD_00566 at 592.739 kb on + strand, within ECD_00566 at 592.740 kb on - strand, within ECD_00566 at 592.740 kb on - strand, within ECD_00566 at 592.740 kb on - strand, within ECD_00566 at 592.740 kb on - strand, within ECD_00566 at 592.751 kb on - strand, within ECD_00566 at 592.751 kb on - strand, within ECD_00566 at 592.787 kb on + strand, within ECD_00566 at 592.824 kb on - strand, within ECD_00566 at 592.959 kb on - strand at 592.959 kb on - strand at 593.050 kb on - strand, within ECD_00567 at 593.050 kb on - strand, within ECD_00567 at 593.061 kb on - strand, within ECD_00567 at 593.245 kb on + strand, within ECD_00567 at 593.248 kb on + strand, within ECD_00567 at 593.249 kb on - strand, within ECD_00567 at 593.249 kb on - strand, within ECD_00567 at 593.325 kb on - strand, within ECD_00567 at 593.480 kb on - strand, within ECD_00567 at 593.503 kb on + strand, within ECD_00567 at 593.504 kb on - strand, within ECD_00567 at 593.529 kb on + strand, within ECD_00567 at 593.530 kb on - strand, within ECD_00567 at 593.727 kb on - strand, within ECD_00567 at 593.762 kb on - strand, within ECD_00567
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1261 remove 591,736 + +0.2 591,736 + +0.9 591,737 - +1.0 591,737 - +1.1 591,737 - +0.0 591,737 - +0.8 591,762 + +1.0 591,763 - -0.5 591,830 + -0.0 591,961 + -0.1 591,962 - -0.4 592,003 - -0.8 592,102 + -0.2 592,102 + -0.8 592,258 + -0.0 592,260 + +1.0 592,260 + -0.3 592,326 + -0.8 592,362 + +0.1 592,418 - +0.7 592,475 - -2.1 592,688 + ECD_00566 0.15 +0.6 592,739 + ECD_00566 0.41 +0.3 592,739 + ECD_00566 0.41 +0.3 592,740 - ECD_00566 0.41 -0.3 592,740 - ECD_00566 0.41 +1.6 592,740 - ECD_00566 0.41 -0.2 592,740 - ECD_00566 0.41 +1.4 592,751 - ECD_00566 0.47 +0.3 592,751 - ECD_00566 0.47 +0.6 592,787 + ECD_00566 0.65 -0.9 592,824 - ECD_00566 0.84 +1.5 592,959 - +0.5 592,959 - -0.9 593,050 - ECD_00567 0.17 +0.1 593,050 - ECD_00567 0.17 +0.0 593,061 - ECD_00567 0.18 +0.1 593,245 + ECD_00567 0.35 +0.8 593,248 + ECD_00567 0.35 +0.8 593,249 - ECD_00567 0.35 -1.1 593,249 - ECD_00567 0.35 +0.8 593,325 - ECD_00567 0.42 +0.8 593,480 - ECD_00567 0.56 +1.3 593,503 + ECD_00567 0.59 +0.4 593,504 - ECD_00567 0.59 -0.4 593,529 + ECD_00567 0.61 +0.1 593,530 - ECD_00567 0.61 +0.3 593,727 - ECD_00567 0.79 +0.2 593,762 - ECD_00567 0.82 +0.8
Or see this region's nucleotide sequence