Experiment: Laval1261
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00465 and ECD_00466 are separated by 10 nucleotides ECD_00466 and ECD_00467 are separated by 21 nucleotides
ECD_00465: ECD_00465 - S-ureidoglycine aminohydrolase, at 512,406 to 513,191
_00465
ECD_00466: ECD_00466 - allantoate amidohydrolase, at 513,202 to 514,437
_00466
ECD_00467: ECD_00467 - ureidoglycolate dehydrogenase, at 514,459 to 515,508
_00467
Position (kb) 513
514
515 Strain fitness (log2 ratio) -2
-1
0
1 at 512.375 kb on + strand at 512.376 kb on - strand at 512.578 kb on + strand, within ECD_00465 at 512.708 kb on + strand, within ECD_00465 at 512.716 kb on + strand, within ECD_00465 at 512.776 kb on - strand, within ECD_00465 at 512.795 kb on + strand, within ECD_00465 at 512.796 kb on - strand, within ECD_00465 at 512.797 kb on + strand, within ECD_00465 at 512.919 kb on - strand, within ECD_00465 at 512.936 kb on - strand, within ECD_00465 at 513.150 kb on + strand at 513.181 kb on - strand at 513.490 kb on - strand, within ECD_00466 at 513.571 kb on - strand, within ECD_00466 at 513.790 kb on - strand, within ECD_00466 at 513.790 kb on - strand, within ECD_00466 at 513.889 kb on - strand, within ECD_00466 at 514.041 kb on - strand, within ECD_00466 at 514.090 kb on - strand, within ECD_00466 at 514.090 kb on - strand, within ECD_00466 at 514.252 kb on + strand, within ECD_00466 at 514.253 kb on - strand, within ECD_00466 at 514.771 kb on + strand, within ECD_00467 at 514.783 kb on + strand, within ECD_00467 at 514.867 kb on + strand, within ECD_00467 at 514.932 kb on + strand, within ECD_00467 at 514.932 kb on + strand, within ECD_00467 at 514.932 kb on + strand, within ECD_00467 at 514.932 kb on + strand, within ECD_00467 at 514.933 kb on - strand, within ECD_00467 at 514.996 kb on - strand, within ECD_00467 at 515.406 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1261 remove 512,375 + +0.1 512,376 - +0.7 512,578 + ECD_00465 0.22 +0.8 512,708 + ECD_00465 0.38 +0.1 512,716 + ECD_00465 0.39 +0.3 512,776 - ECD_00465 0.47 -0.4 512,795 + ECD_00465 0.49 -0.5 512,796 - ECD_00465 0.50 +0.1 512,797 + ECD_00465 0.50 -0.4 512,919 - ECD_00465 0.65 +0.2 512,936 - ECD_00465 0.67 -0.8 513,150 + +0.9 513,181 - -0.1 513,490 - ECD_00466 0.23 -0.7 513,571 - ECD_00466 0.30 +0.9 513,790 - ECD_00466 0.48 +0.3 513,790 - ECD_00466 0.48 +1.1 513,889 - ECD_00466 0.56 -0.3 514,041 - ECD_00466 0.68 +0.4 514,090 - ECD_00466 0.72 +0.8 514,090 - ECD_00466 0.72 +0.8 514,252 + ECD_00466 0.85 +0.6 514,253 - ECD_00466 0.85 -0.6 514,771 + ECD_00467 0.30 -2.4 514,783 + ECD_00467 0.31 +0.7 514,867 + ECD_00467 0.39 -1.3 514,932 + ECD_00467 0.45 +0.8 514,932 + ECD_00467 0.45 +0.1 514,932 + ECD_00467 0.45 +0.9 514,932 + ECD_00467 0.45 +0.3 514,933 - ECD_00467 0.45 +0.9 514,996 - ECD_00467 0.51 -0.2 515,406 - +0.3
Or see this region's nucleotide sequence