Strain Fitness in Escherichia coli BL21 around ECD_00255

Experiment: Laval1261

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00254 and ECD_00255 are separated by 174 nucleotides ECD_00254: ECD_00254 - uncharacterized protein, at 282,295 to 282,522 _00254 ECD_00255: ECD_00255 - 50S ribosomal protein L31 type B; alternative zinc-limitation L31 protein, at 282,697 to 282,960 _00255 Position (kb) 282 283Strain fitness (log2 ratio) -1 0 1 2at 281.860 kb on - strandat 282.046 kb on + strandat 282.046 kb on + strandat 282.092 kb on + strandat 282.172 kb on + strandat 282.241 kb on + strandat 282.246 kb on + strandat 282.364 kb on + strand, within ECD_00254at 282.364 kb on + strand, within ECD_00254at 282.397 kb on - strand, within ECD_00254at 282.397 kb on - strand, within ECD_00254at 282.401 kb on + strand, within ECD_00254at 282.401 kb on + strand, within ECD_00254at 282.457 kb on + strand, within ECD_00254at 282.457 kb on + strand, within ECD_00254at 282.590 kb on - strandat 282.619 kb on - strandat 282.619 kb on - strandat 282.619 kb on - strandat 282.620 kb on + strandat 282.789 kb on + strand, within ECD_00255at 282.791 kb on + strand, within ECD_00255at 282.830 kb on + strand, within ECD_00255at 282.831 kb on - strand, within ECD_00255at 282.896 kb on + strand, within ECD_00255at 283.110 kb on - strandat 283.462 kb on - strandat 283.571 kb on + strandat 283.762 kb on - strandat 283.765 kb on + strandat 283.773 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1261
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281,860 - -0.6
282,046 + -0.4
282,046 + +0.9
282,092 + +0.7
282,172 + -0.8
282,241 + +2.2
282,246 + +0.7
282,364 + ECD_00254 0.30 +0.1
282,364 + ECD_00254 0.30 +0.5
282,397 - ECD_00254 0.45 +0.8
282,397 - ECD_00254 0.45 +0.0
282,401 + ECD_00254 0.46 +0.3
282,401 + ECD_00254 0.46 +0.5
282,457 + ECD_00254 0.71 -0.1
282,457 + ECD_00254 0.71 -0.9
282,590 - +0.4
282,619 - -0.3
282,619 - +0.1
282,619 - +0.1
282,620 + -0.0
282,789 + ECD_00255 0.35 -0.0
282,791 + ECD_00255 0.36 +0.6
282,830 + ECD_00255 0.50 +0.6
282,831 - ECD_00255 0.51 +1.0
282,896 + ECD_00255 0.75 +0.6
283,110 - +0.4
283,462 - -0.0
283,571 + +0.3
283,762 - -0.1
283,765 + -0.1
283,773 + +0.5

Or see this region's nucleotide sequence