Strain Fitness in Escherichia coli BL21 around ECD_03907

Experiment: Laval1261

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03906 and ECD_03907 are separated by 364 nucleotidesECD_03907 and ECD_03908 are separated by 71 nucleotides ECD_03906: ECD_03906 - maltose transporter subunit, at 4,152,601 to 4,153,791 _03906 ECD_03907: ECD_03907 - maltose ABC transporter ATPase, at 4,154,156 to 4,155,271 _03907 ECD_03908: ECD_03908 - maltose outer membrane porin (maltoporin), at 4,155,343 to 4,156,683 _03908 Position (kb) 4154 4155 4156Strain fitness (log2 ratio) -2 -1 0 1at 4153.179 kb on + strand, within ECD_03906at 4153.250 kb on + strand, within ECD_03906at 4153.250 kb on + strand, within ECD_03906at 4153.251 kb on - strand, within ECD_03906at 4153.419 kb on - strand, within ECD_03906at 4153.423 kb on + strand, within ECD_03906at 4153.536 kb on + strand, within ECD_03906at 4153.537 kb on - strand, within ECD_03906at 4153.614 kb on + strand, within ECD_03906at 4153.664 kb on + strand, within ECD_03906at 4153.665 kb on - strand, within ECD_03906at 4153.699 kb on - strandat 4153.699 kb on - strandat 4153.699 kb on - strandat 4153.699 kb on - strandat 4153.791 kb on + strandat 4153.797 kb on - strandat 4153.797 kb on - strandat 4153.832 kb on + strandat 4153.843 kb on + strandat 4153.844 kb on - strandat 4153.853 kb on - strandat 4153.855 kb on - strandat 4153.992 kb on + strandat 4153.992 kb on + strandat 4154.007 kb on + strandat 4154.076 kb on + strandat 4154.098 kb on + strandat 4154.099 kb on - strandat 4154.140 kb on - strandat 4154.166 kb on + strandat 4154.166 kb on + strandat 4154.166 kb on + strandat 4154.166 kb on + strandat 4154.166 kb on + strandat 4154.166 kb on + strandat 4154.167 kb on - strandat 4154.167 kb on - strandat 4154.167 kb on - strandat 4154.218 kb on + strandat 4154.289 kb on + strand, within ECD_03907at 4154.290 kb on - strand, within ECD_03907at 4154.389 kb on + strand, within ECD_03907at 4154.389 kb on + strand, within ECD_03907at 4154.406 kb on - strand, within ECD_03907at 4154.406 kb on - strand, within ECD_03907at 4154.517 kb on + strand, within ECD_03907at 4154.617 kb on - strand, within ECD_03907at 4154.720 kb on + strand, within ECD_03907at 4154.721 kb on - strand, within ECD_03907at 4154.819 kb on + strand, within ECD_03907at 4155.025 kb on - strand, within ECD_03907at 4155.140 kb on + strand, within ECD_03907at 4155.141 kb on - strand, within ECD_03907at 4155.165 kb on + strandat 4155.339 kb on + strandat 4155.340 kb on - strandat 4155.395 kb on + strandat 4155.395 kb on + strandat 4155.493 kb on - strand, within ECD_03908at 4155.507 kb on + strand, within ECD_03908at 4155.507 kb on + strand, within ECD_03908at 4155.508 kb on - strand, within ECD_03908at 4155.538 kb on + strand, within ECD_03908at 4155.539 kb on - strand, within ECD_03908at 4155.592 kb on + strand, within ECD_03908at 4155.603 kb on + strand, within ECD_03908at 4155.604 kb on - strand, within ECD_03908at 4155.604 kb on - strand, within ECD_03908at 4155.613 kb on + strand, within ECD_03908at 4155.613 kb on + strand, within ECD_03908at 4155.726 kb on + strand, within ECD_03908at 4155.727 kb on - strand, within ECD_03908at 4155.736 kb on + strand, within ECD_03908at 4155.757 kb on - strand, within ECD_03908at 4155.757 kb on - strand, within ECD_03908at 4155.771 kb on - strand, within ECD_03908at 4155.894 kb on + strand, within ECD_03908at 4155.894 kb on + strand, within ECD_03908at 4155.895 kb on - strand, within ECD_03908at 4155.895 kb on - strand, within ECD_03908at 4155.895 kb on - strand, within ECD_03908at 4155.895 kb on - strand, within ECD_03908at 4155.898 kb on + strand, within ECD_03908at 4155.898 kb on + strand, within ECD_03908at 4155.898 kb on + strand, within ECD_03908at 4155.899 kb on - strand, within ECD_03908at 4155.899 kb on - strand, within ECD_03908at 4155.905 kb on - strand, within ECD_03908at 4155.977 kb on + strand, within ECD_03908at 4155.977 kb on + strand, within ECD_03908at 4155.977 kb on + strand, within ECD_03908at 4155.978 kb on - strand, within ECD_03908at 4155.978 kb on - strand, within ECD_03908at 4156.022 kb on - strand, within ECD_03908at 4156.074 kb on + strand, within ECD_03908at 4156.117 kb on + strand, within ECD_03908

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1261
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4,153,179 + ECD_03906 0.49 -0.6
4,153,250 + ECD_03906 0.54 +0.7
4,153,250 + ECD_03906 0.54 +0.6
4,153,251 - ECD_03906 0.55 -0.3
4,153,419 - ECD_03906 0.69 +1.0
4,153,423 + ECD_03906 0.69 +0.7
4,153,536 + ECD_03906 0.79 +0.2
4,153,537 - ECD_03906 0.79 -0.1
4,153,614 + ECD_03906 0.85 +0.6
4,153,664 + ECD_03906 0.89 +0.1
4,153,665 - ECD_03906 0.89 +0.8
4,153,699 - -0.8
4,153,699 - -0.1
4,153,699 - +0.8
4,153,699 - +0.6
4,153,791 + +0.2
4,153,797 - +0.1
4,153,797 - +0.3
4,153,832 + +0.2
4,153,843 + -0.2
4,153,844 - +0.0
4,153,853 - +0.4
4,153,855 - +0.5
4,153,992 + +0.0
4,153,992 + +0.7
4,154,007 + -0.5
4,154,076 + +0.1
4,154,098 + -0.2
4,154,099 - +0.2
4,154,140 - -1.3
4,154,166 + -1.5
4,154,166 + -0.6
4,154,166 + -2.1
4,154,166 + +0.1
4,154,166 + -0.2
4,154,166 + -0.5
4,154,167 - -0.3
4,154,167 - -0.9
4,154,167 - -0.0
4,154,218 + -0.1
4,154,289 + ECD_03907 0.12 +0.2
4,154,290 - ECD_03907 0.12 -0.9
4,154,389 + ECD_03907 0.21 +0.1
4,154,389 + ECD_03907 0.21 +0.1
4,154,406 - ECD_03907 0.22 -1.1
4,154,406 - ECD_03907 0.22 -1.9
4,154,517 + ECD_03907 0.32 +0.1
4,154,617 - ECD_03907 0.41 -0.9
4,154,720 + ECD_03907 0.51 +0.2
4,154,721 - ECD_03907 0.51 -0.4
4,154,819 + ECD_03907 0.59 -0.1
4,155,025 - ECD_03907 0.78 +1.1
4,155,140 + ECD_03907 0.88 -1.2
4,155,141 - ECD_03907 0.88 +0.0
4,155,165 + +0.1
4,155,339 + -0.0
4,155,340 - -0.6
4,155,395 + +0.5
4,155,395 + -0.1
4,155,493 - ECD_03908 0.11 +0.0
4,155,507 + ECD_03908 0.12 -0.6
4,155,507 + ECD_03908 0.12 -0.2
4,155,508 - ECD_03908 0.12 +0.3
4,155,538 + ECD_03908 0.15 -0.3
4,155,539 - ECD_03908 0.15 -0.3
4,155,592 + ECD_03908 0.19 +0.2
4,155,603 + ECD_03908 0.19 -0.3
4,155,604 - ECD_03908 0.19 -0.1
4,155,604 - ECD_03908 0.19 -0.1
4,155,613 + ECD_03908 0.20 -0.5
4,155,613 + ECD_03908 0.20 -0.6
4,155,726 + ECD_03908 0.29 -0.6
4,155,727 - ECD_03908 0.29 +0.4
4,155,736 + ECD_03908 0.29 -0.2
4,155,757 - ECD_03908 0.31 -0.1
4,155,757 - ECD_03908 0.31 -0.1
4,155,771 - ECD_03908 0.32 +0.4
4,155,894 + ECD_03908 0.41 -0.1
4,155,894 + ECD_03908 0.41 +0.0
4,155,895 - ECD_03908 0.41 -0.7
4,155,895 - ECD_03908 0.41 +0.6
4,155,895 - ECD_03908 0.41 -0.5
4,155,895 - ECD_03908 0.41 -0.4
4,155,898 + ECD_03908 0.41 -0.7
4,155,898 + ECD_03908 0.41 +0.4
4,155,898 + ECD_03908 0.41 -0.6
4,155,899 - ECD_03908 0.41 -0.4
4,155,899 - ECD_03908 0.41 -0.4
4,155,905 - ECD_03908 0.42 -0.5
4,155,977 + ECD_03908 0.47 -0.1
4,155,977 + ECD_03908 0.47 +0.5
4,155,977 + ECD_03908 0.47 -0.5
4,155,978 - ECD_03908 0.47 +0.1
4,155,978 - ECD_03908 0.47 -0.3
4,156,022 - ECD_03908 0.51 +0.0
4,156,074 + ECD_03908 0.55 -0.3
4,156,117 + ECD_03908 0.58 +0.0

Or see this region's nucleotide sequence