Experiment: Laval1261
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03801 and ECD_03802 are separated by 319 nucleotides ECD_03802 and ECD_03803 are separated by 106 nucleotides ECD_03803 and ECD_03804 are separated by 54 nucleotides
ECD_03801: ECD_03801 - 6-phosphofructokinase I, at 4,015,474 to 4,016,436
_03801
ECD_03802: ECD_03802 - sulfate transporter subunit, at 4,016,756 to 4,017,745
_03802
ECD_03803: ECD_03803 - CDP-diacylglycerol phosphotidylhydrolase, at 4,017,852 to 4,018,607
_03803
ECD_03804: ECD_03804 - triosephosphate isomerase, at 4,018,662 to 4,019,429
_03804
Position (kb)
4016
4017
4018 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4015.792 kb on + strand, within ECD_03801 at 4015.792 kb on + strand, within ECD_03801 at 4015.792 kb on + strand, within ECD_03801 at 4015.793 kb on - strand, within ECD_03801 at 4015.793 kb on - strand, within ECD_03801 at 4015.793 kb on - strand, within ECD_03801 at 4015.793 kb on - strand, within ECD_03801 at 4015.879 kb on + strand, within ECD_03801 at 4015.879 kb on + strand, within ECD_03801 at 4015.879 kb on + strand, within ECD_03801 at 4015.879 kb on + strand, within ECD_03801 at 4015.879 kb on + strand, within ECD_03801 at 4015.880 kb on - strand, within ECD_03801 at 4015.916 kb on + strand, within ECD_03801 at 4015.916 kb on + strand, within ECD_03801 at 4015.916 kb on + strand, within ECD_03801 at 4015.916 kb on + strand, within ECD_03801 at 4015.917 kb on - strand, within ECD_03801 at 4015.962 kb on + strand, within ECD_03801 at 4015.962 kb on + strand, within ECD_03801 at 4015.963 kb on - strand, within ECD_03801 at 4016.113 kb on - strand, within ECD_03801 at 4016.145 kb on + strand, within ECD_03801 at 4016.145 kb on + strand, within ECD_03801 at 4016.145 kb on + strand, within ECD_03801 at 4016.145 kb on + strand, within ECD_03801 at 4016.145 kb on + strand, within ECD_03801 at 4016.145 kb on + strand, within ECD_03801 at 4016.145 kb on + strand, within ECD_03801 at 4016.146 kb on - strand, within ECD_03801 at 4016.146 kb on - strand, within ECD_03801 at 4016.146 kb on - strand, within ECD_03801 at 4016.146 kb on - strand, within ECD_03801 at 4016.146 kb on - strand, within ECD_03801 at 4016.146 kb on - strand, within ECD_03801 at 4016.251 kb on + strand, within ECD_03801 at 4016.251 kb on + strand, within ECD_03801 at 4016.284 kb on + strand, within ECD_03801 at 4016.284 kb on + strand, within ECD_03801 at 4016.284 kb on + strand, within ECD_03801 at 4016.284 kb on + strand, within ECD_03801 at 4016.285 kb on - strand, within ECD_03801 at 4016.285 kb on - strand, within ECD_03801 at 4016.327 kb on + strand, within ECD_03801 at 4016.327 kb on + strand, within ECD_03801 at 4016.327 kb on + strand, within ECD_03801 at 4016.328 kb on - strand, within ECD_03801 at 4016.328 kb on - strand, within ECD_03801 at 4016.332 kb on - strand, within ECD_03801 at 4016.431 kb on + strand at 4016.435 kb on - strand at 4016.618 kb on - strand at 4016.618 kb on - strand at 4016.741 kb on + strand at 4016.741 kb on + strand at 4016.741 kb on + strand at 4016.741 kb on + strand at 4016.741 kb on + strand at 4016.741 kb on + strand at 4016.741 kb on + strand at 4016.742 kb on - strand at 4016.742 kb on - strand at 4016.742 kb on - strand at 4016.742 kb on - strand at 4016.742 kb on - strand at 4016.742 kb on - strand at 4016.772 kb on + strand at 4016.819 kb on - strand at 4016.841 kb on - strand at 4016.861 kb on + strand, within ECD_03802 at 4016.862 kb on - strand, within ECD_03802 at 4016.871 kb on - strand, within ECD_03802 at 4016.977 kb on + strand, within ECD_03802 at 4016.978 kb on - strand, within ECD_03802 at 4017.011 kb on + strand, within ECD_03802 at 4017.011 kb on + strand, within ECD_03802 at 4017.049 kb on + strand, within ECD_03802 at 4017.089 kb on + strand, within ECD_03802 at 4017.118 kb on + strand, within ECD_03802 at 4017.160 kb on + strand, within ECD_03802 at 4017.160 kb on + strand, within ECD_03802 at 4017.188 kb on - strand, within ECD_03802 at 4017.343 kb on + strand, within ECD_03802 at 4017.375 kb on + strand, within ECD_03802 at 4017.375 kb on + strand, within ECD_03802 at 4017.376 kb on - strand, within ECD_03802 at 4017.376 kb on - strand, within ECD_03802 at 4017.376 kb on - strand, within ECD_03802 at 4017.431 kb on - strand, within ECD_03802 at 4017.546 kb on - strand, within ECD_03802 at 4017.551 kb on + strand, within ECD_03802 at 4017.551 kb on + strand, within ECD_03802 at 4017.651 kb on + strand at 4017.652 kb on - strand at 4017.762 kb on - strand at 4017.762 kb on - strand at 4017.838 kb on - strand at 4017.886 kb on + strand at 4017.952 kb on + strand, within ECD_03803 at 4017.952 kb on + strand, within ECD_03803 at 4017.953 kb on - strand, within ECD_03803 at 4017.953 kb on - strand, within ECD_03803 at 4017.956 kb on + strand, within ECD_03803 at 4017.956 kb on + strand, within ECD_03803 at 4017.957 kb on - strand, within ECD_03803 at 4017.957 kb on - strand, within ECD_03803 at 4018.062 kb on - strand, within ECD_03803 at 4018.077 kb on + strand, within ECD_03803 at 4018.078 kb on - strand, within ECD_03803 at 4018.095 kb on + strand, within ECD_03803 at 4018.100 kb on + strand, within ECD_03803 at 4018.101 kb on - strand, within ECD_03803 at 4018.101 kb on - strand, within ECD_03803 at 4018.110 kb on - strand, within ECD_03803 at 4018.253 kb on + strand, within ECD_03803 at 4018.271 kb on + strand, within ECD_03803 at 4018.277 kb on + strand, within ECD_03803 at 4018.277 kb on + strand, within ECD_03803 at 4018.277 kb on + strand, within ECD_03803 at 4018.277 kb on + strand, within ECD_03803 at 4018.277 kb on + strand, within ECD_03803 at 4018.277 kb on + strand, within ECD_03803 at 4018.278 kb on - strand, within ECD_03803 at 4018.278 kb on - strand, within ECD_03803 at 4018.278 kb on - strand, within ECD_03803 at 4018.286 kb on + strand, within ECD_03803 at 4018.286 kb on + strand, within ECD_03803 at 4018.287 kb on - strand, within ECD_03803 at 4018.414 kb on + strand, within ECD_03803 at 4018.415 kb on - strand, within ECD_03803 at 4018.431 kb on - strand, within ECD_03803 at 4018.431 kb on - strand, within ECD_03803 at 4018.431 kb on - strand, within ECD_03803 at 4018.431 kb on - strand, within ECD_03803 at 4018.431 kb on - strand, within ECD_03803 at 4018.469 kb on + strand, within ECD_03803 at 4018.509 kb on - strand, within ECD_03803 at 4018.509 kb on - strand, within ECD_03803 at 4018.509 kb on - strand, within ECD_03803 at 4018.619 kb on - strand at 4018.619 kb on - strand at 4018.627 kb on + strand at 4018.628 kb on - strand at 4018.663 kb on + strand at 4018.663 kb on + strand at 4018.664 kb on - strand at 4018.664 kb on - strand at 4018.691 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1261 remove 4,015,792 + ECD_03801 0.33 +1.5 4,015,792 + ECD_03801 0.33 +2.5 4,015,792 + ECD_03801 0.33 -0.4 4,015,793 - ECD_03801 0.33 -0.3 4,015,793 - ECD_03801 0.33 +0.2 4,015,793 - ECD_03801 0.33 -1.5 4,015,793 - ECD_03801 0.33 -1.0 4,015,879 + ECD_03801 0.42 -0.5 4,015,879 + ECD_03801 0.42 +2.1 4,015,879 + ECD_03801 0.42 -0.1 4,015,879 + ECD_03801 0.42 -1.8 4,015,879 + ECD_03801 0.42 -0.4 4,015,880 - ECD_03801 0.42 +1.5 4,015,916 + ECD_03801 0.46 +0.5 4,015,916 + ECD_03801 0.46 -0.1 4,015,916 + ECD_03801 0.46 -0.2 4,015,916 + ECD_03801 0.46 -0.3 4,015,917 - ECD_03801 0.46 -0.1 4,015,962 + ECD_03801 0.51 -0.3 4,015,962 + ECD_03801 0.51 -0.5 4,015,963 - ECD_03801 0.51 +2.5 4,016,113 - ECD_03801 0.66 -1.0 4,016,145 + ECD_03801 0.70 -1.9 4,016,145 + ECD_03801 0.70 -0.2 4,016,145 + ECD_03801 0.70 -1.5 4,016,145 + ECD_03801 0.70 -2.6 4,016,145 + ECD_03801 0.70 -0.7 4,016,145 + ECD_03801 0.70 -0.4 4,016,145 + ECD_03801 0.70 +0.0 4,016,146 - ECD_03801 0.70 -1.0 4,016,146 - ECD_03801 0.70 -2.2 4,016,146 - ECD_03801 0.70 +1.5 4,016,146 - ECD_03801 0.70 -0.8 4,016,146 - ECD_03801 0.70 -0.5 4,016,146 - ECD_03801 0.70 -0.8 4,016,251 + ECD_03801 0.81 -0.1 4,016,251 + ECD_03801 0.81 +0.5 4,016,284 + ECD_03801 0.84 -0.6 4,016,284 + ECD_03801 0.84 -0.6 4,016,284 + ECD_03801 0.84 -0.5 4,016,284 + ECD_03801 0.84 -0.2 4,016,285 - ECD_03801 0.84 -3.0 4,016,285 - ECD_03801 0.84 -2.0 4,016,327 + ECD_03801 0.89 -0.3 4,016,327 + ECD_03801 0.89 -0.5 4,016,327 + ECD_03801 0.89 +0.5 4,016,328 - ECD_03801 0.89 +1.9 4,016,328 - ECD_03801 0.89 +1.1 4,016,332 - ECD_03801 0.89 +0.2 4,016,431 + -0.0 4,016,435 - -0.1 4,016,618 - -0.7 4,016,618 - +0.9 4,016,741 + -1.4 4,016,741 + +0.7 4,016,741 + -0.8 4,016,741 + -0.7 4,016,741 + +0.4 4,016,741 + +0.4 4,016,741 + -0.9 4,016,742 - +0.1 4,016,742 - -0.0 4,016,742 - -0.3 4,016,742 - -0.0 4,016,742 - -2.9 4,016,742 - -0.1 4,016,772 + +0.3 4,016,819 - +0.5 4,016,841 - +0.2 4,016,861 + ECD_03802 0.11 +0.4 4,016,862 - ECD_03802 0.11 +0.5 4,016,871 - ECD_03802 0.12 -0.1 4,016,977 + ECD_03802 0.22 -1.3 4,016,978 - ECD_03802 0.22 -0.2 4,017,011 + ECD_03802 0.26 -0.6 4,017,011 + ECD_03802 0.26 -0.3 4,017,049 + ECD_03802 0.30 +0.1 4,017,089 + ECD_03802 0.34 -0.8 4,017,118 + ECD_03802 0.37 +0.5 4,017,160 + ECD_03802 0.41 +1.2 4,017,160 + ECD_03802 0.41 -0.1 4,017,188 - ECD_03802 0.44 -0.1 4,017,343 + ECD_03802 0.59 -0.8 4,017,375 + ECD_03802 0.63 -0.7 4,017,375 + ECD_03802 0.63 -1.0 4,017,376 - ECD_03802 0.63 +0.1 4,017,376 - ECD_03802 0.63 -0.3 4,017,376 - ECD_03802 0.63 +0.6 4,017,431 - ECD_03802 0.68 +0.9 4,017,546 - ECD_03802 0.80 +0.4 4,017,551 + ECD_03802 0.80 -0.4 4,017,551 + ECD_03802 0.80 -0.9 4,017,651 + +0.4 4,017,652 - +0.3 4,017,762 - +0.1 4,017,762 - -0.4 4,017,838 - -1.6 4,017,886 + +0.3 4,017,952 + ECD_03803 0.13 +0.1 4,017,952 + ECD_03803 0.13 +0.2 4,017,953 - ECD_03803 0.13 +0.4 4,017,953 - ECD_03803 0.13 +0.2 4,017,956 + ECD_03803 0.14 +0.8 4,017,956 + ECD_03803 0.14 +0.3 4,017,957 - ECD_03803 0.14 -0.1 4,017,957 - ECD_03803 0.14 +0.2 4,018,062 - ECD_03803 0.28 -0.3 4,018,077 + ECD_03803 0.30 +0.2 4,018,078 - ECD_03803 0.30 -0.1 4,018,095 + ECD_03803 0.32 -1.5 4,018,100 + ECD_03803 0.33 +1.3 4,018,101 - ECD_03803 0.33 -0.1 4,018,101 - ECD_03803 0.33 -1.8 4,018,110 - ECD_03803 0.34 -0.3 4,018,253 + ECD_03803 0.53 +0.2 4,018,271 + ECD_03803 0.55 +0.5 4,018,277 + ECD_03803 0.56 -0.0 4,018,277 + ECD_03803 0.56 +0.2 4,018,277 + ECD_03803 0.56 +0.1 4,018,277 + ECD_03803 0.56 -1.1 4,018,277 + ECD_03803 0.56 +0.9 4,018,277 + ECD_03803 0.56 +0.5 4,018,278 - ECD_03803 0.56 -0.0 4,018,278 - ECD_03803 0.56 +0.3 4,018,278 - ECD_03803 0.56 +0.6 4,018,286 + ECD_03803 0.57 -0.1 4,018,286 + ECD_03803 0.57 -0.2 4,018,287 - ECD_03803 0.58 +0.1 4,018,414 + ECD_03803 0.74 +2.1 4,018,415 - ECD_03803 0.74 +0.7 4,018,431 - ECD_03803 0.77 -0.3 4,018,431 - ECD_03803 0.77 -0.7 4,018,431 - ECD_03803 0.77 +0.0 4,018,431 - ECD_03803 0.77 -0.0 4,018,431 - ECD_03803 0.77 -0.5 4,018,469 + ECD_03803 0.82 -0.0 4,018,509 - ECD_03803 0.87 +0.3 4,018,509 - ECD_03803 0.87 -0.3 4,018,509 - ECD_03803 0.87 +0.1 4,018,619 - +1.5 4,018,619 - -0.3 4,018,627 + -0.3 4,018,628 - -1.5 4,018,663 + +0.3 4,018,663 + -0.0 4,018,664 - +0.4 4,018,664 - +0.5 4,018,691 + +1.5
Or see this region's nucleotide sequence