Strain Fitness in Escherichia coli BL21 around ECD_03709

Experiment: Laval1261

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03708 and ECD_03709 are separated by 93 nucleotidesECD_03709 and ECD_03710 are separated by 77 nucleotides ECD_03708: ECD_03708 - 5-methyltetrahydropteroyltriglutamate- homocysteine S-methyltransferase, at 3,905,920 to 3,908,181 _03708 ECD_03709: ECD_03709 - hypothetical protein, at 3,908,275 to 3,909,171 _03709 ECD_03710: ECD_03710 - putative permease, at 3,909,249 to 3,910,472 _03710 Position (kb) 3908 3909 3910Strain fitness (log2 ratio) -2 -1 0 1at 3907.288 kb on + strand, within ECD_03708at 3907.288 kb on + strand, within ECD_03708at 3907.289 kb on - strand, within ECD_03708at 3907.312 kb on - strand, within ECD_03708at 3907.312 kb on - strand, within ECD_03708at 3907.312 kb on - strand, within ECD_03708at 3907.361 kb on + strand, within ECD_03708at 3907.361 kb on + strand, within ECD_03708at 3907.361 kb on + strand, within ECD_03708at 3907.361 kb on + strand, within ECD_03708at 3907.362 kb on - strand, within ECD_03708at 3907.362 kb on - strand, within ECD_03708at 3907.397 kb on - strand, within ECD_03708at 3907.453 kb on + strand, within ECD_03708at 3907.453 kb on + strand, within ECD_03708at 3907.453 kb on + strand, within ECD_03708at 3907.454 kb on - strand, within ECD_03708at 3907.535 kb on - strand, within ECD_03708at 3907.554 kb on + strand, within ECD_03708at 3907.592 kb on + strand, within ECD_03708at 3907.768 kb on + strand, within ECD_03708at 3907.769 kb on - strand, within ECD_03708at 3907.785 kb on - strand, within ECD_03708at 3908.186 kb on + strandat 3908.186 kb on + strandat 3908.202 kb on + strandat 3908.217 kb on + strandat 3908.217 kb on + strandat 3908.217 kb on + strandat 3908.248 kb on + strandat 3908.248 kb on + strandat 3908.252 kb on + strandat 3908.252 kb on + strandat 3908.252 kb on + strandat 3908.252 kb on + strandat 3908.252 kb on + strandat 3908.253 kb on - strandat 3908.253 kb on - strandat 3908.253 kb on - strandat 3908.253 kb on - strandat 3908.253 kb on - strandat 3908.253 kb on - strandat 3908.253 kb on - strandat 3908.253 kb on - strandat 3908.253 kb on - strandat 3908.253 kb on - strandat 3908.253 kb on - strandat 3908.253 kb on - strandat 3908.262 kb on - strandat 3908.290 kb on + strandat 3908.309 kb on + strandat 3908.310 kb on - strandat 3908.310 kb on - strandat 3908.314 kb on + strandat 3908.341 kb on - strandat 3908.365 kb on + strand, within ECD_03709at 3908.383 kb on - strand, within ECD_03709at 3908.383 kb on - strand, within ECD_03709at 3908.403 kb on + strand, within ECD_03709at 3908.403 kb on + strand, within ECD_03709at 3908.412 kb on + strand, within ECD_03709at 3908.412 kb on + strand, within ECD_03709at 3908.413 kb on - strand, within ECD_03709at 3908.452 kb on - strand, within ECD_03709at 3908.452 kb on - strand, within ECD_03709at 3908.454 kb on - strand, within ECD_03709at 3908.476 kb on + strand, within ECD_03709at 3908.476 kb on + strand, within ECD_03709at 3908.476 kb on + strand, within ECD_03709at 3908.476 kb on + strand, within ECD_03709at 3908.477 kb on - strand, within ECD_03709at 3908.477 kb on - strand, within ECD_03709at 3908.479 kb on + strand, within ECD_03709at 3908.560 kb on - strand, within ECD_03709at 3908.560 kb on - strand, within ECD_03709at 3908.732 kb on + strand, within ECD_03709at 3908.733 kb on - strand, within ECD_03709at 3908.733 kb on - strand, within ECD_03709at 3908.756 kb on + strand, within ECD_03709at 3908.757 kb on - strand, within ECD_03709at 3908.780 kb on + strand, within ECD_03709at 3908.780 kb on + strand, within ECD_03709at 3908.780 kb on + strand, within ECD_03709at 3908.781 kb on - strand, within ECD_03709at 3908.781 kb on - strand, within ECD_03709at 3908.781 kb on - strand, within ECD_03709at 3908.781 kb on - strand, within ECD_03709at 3908.781 kb on - strand, within ECD_03709at 3908.782 kb on + strand, within ECD_03709at 3908.782 kb on + strand, within ECD_03709at 3908.783 kb on - strand, within ECD_03709at 3908.783 kb on - strand, within ECD_03709at 3908.794 kb on + strand, within ECD_03709at 3908.866 kb on - strand, within ECD_03709at 3908.869 kb on - strand, within ECD_03709at 3908.901 kb on + strand, within ECD_03709at 3908.964 kb on + strand, within ECD_03709at 3908.978 kb on + strand, within ECD_03709at 3908.978 kb on + strand, within ECD_03709at 3908.978 kb on + strand, within ECD_03709at 3908.979 kb on - strand, within ECD_03709at 3908.979 kb on - strand, within ECD_03709at 3908.979 kb on - strand, within ECD_03709at 3908.979 kb on - strand, within ECD_03709at 3909.004 kb on - strand, within ECD_03709at 3909.004 kb on - strand, within ECD_03709at 3909.005 kb on + strand, within ECD_03709at 3909.005 kb on + strand, within ECD_03709at 3909.005 kb on + strand, within ECD_03709at 3909.005 kb on + strand, within ECD_03709at 3909.005 kb on + strand, within ECD_03709at 3909.005 kb on + strand, within ECD_03709at 3909.006 kb on - strand, within ECD_03709at 3909.006 kb on - strand, within ECD_03709at 3909.065 kb on + strand, within ECD_03709at 3909.066 kb on - strand, within ECD_03709at 3909.066 kb on - strand, within ECD_03709at 3909.087 kb on + strandat 3909.088 kb on - strandat 3909.088 kb on - strandat 3909.088 kb on - strandat 3909.091 kb on + strandat 3909.092 kb on - strandat 3909.111 kb on + strandat 3909.111 kb on + strandat 3909.171 kb on + strandat 3909.171 kb on + strandat 3909.171 kb on + strandat 3909.171 kb on + strandat 3909.171 kb on + strandat 3909.171 kb on + strandat 3909.171 kb on + strandat 3909.172 kb on - strandat 3909.172 kb on - strandat 3909.172 kb on - strandat 3909.172 kb on - strandat 3909.191 kb on + strandat 3909.192 kb on - strandat 3909.192 kb on - strandat 3909.237 kb on + strandat 3909.237 kb on + strandat 3909.237 kb on + strandat 3909.237 kb on + strandat 3909.238 kb on - strandat 3909.238 kb on - strandat 3909.238 kb on - strandat 3909.290 kb on + strandat 3909.290 kb on + strandat 3909.291 kb on - strandat 3909.339 kb on + strandat 3909.339 kb on + strandat 3909.339 kb on + strandat 3909.340 kb on - strandat 3909.349 kb on - strandat 3909.356 kb on + strandat 3909.405 kb on - strand, within ECD_03710at 3909.424 kb on - strand, within ECD_03710at 3909.475 kb on + strand, within ECD_03710at 3909.475 kb on + strand, within ECD_03710at 3909.476 kb on - strand, within ECD_03710at 3909.528 kb on - strand, within ECD_03710at 3909.539 kb on + strand, within ECD_03710at 3909.539 kb on + strand, within ECD_03710at 3909.539 kb on + strand, within ECD_03710at 3909.647 kb on + strand, within ECD_03710at 3909.647 kb on + strand, within ECD_03710at 3909.647 kb on + strand, within ECD_03710at 3909.647 kb on + strand, within ECD_03710at 3909.648 kb on - strand, within ECD_03710at 3909.790 kb on + strand, within ECD_03710at 3909.851 kb on + strand, within ECD_03710at 3909.884 kb on + strand, within ECD_03710at 3909.885 kb on - strand, within ECD_03710at 3909.974 kb on - strand, within ECD_03710at 3909.974 kb on - strand, within ECD_03710at 3909.982 kb on + strand, within ECD_03710at 3909.982 kb on + strand, within ECD_03710at 3909.982 kb on + strand, within ECD_03710at 3909.982 kb on + strand, within ECD_03710at 3909.982 kb on + strand, within ECD_03710at 3909.983 kb on - strand, within ECD_03710at 3909.983 kb on - strand, within ECD_03710at 3909.983 kb on - strand, within ECD_03710at 3909.983 kb on - strand, within ECD_03710at 3910.089 kb on + strand, within ECD_03710at 3910.129 kb on - strand, within ECD_03710at 3910.137 kb on + strand, within ECD_03710at 3910.138 kb on - strand, within ECD_03710at 3910.138 kb on - strand, within ECD_03710at 3910.154 kb on + strand, within ECD_03710at 3910.154 kb on + strand, within ECD_03710at 3910.154 kb on + strand, within ECD_03710at 3910.155 kb on - strand, within ECD_03710at 3910.155 kb on - strand, within ECD_03710at 3910.155 kb on - strand, within ECD_03710

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1261
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3,907,288 + ECD_03708 0.60 -1.3
3,907,288 + ECD_03708 0.60 +0.5
3,907,289 - ECD_03708 0.61 +1.3
3,907,312 - ECD_03708 0.62 +0.7
3,907,312 - ECD_03708 0.62 -0.2
3,907,312 - ECD_03708 0.62 +0.2
3,907,361 + ECD_03708 0.64 +0.0
3,907,361 + ECD_03708 0.64 +1.1
3,907,361 + ECD_03708 0.64 +0.5
3,907,361 + ECD_03708 0.64 +0.0
3,907,362 - ECD_03708 0.64 +0.1
3,907,362 - ECD_03708 0.64 -0.3
3,907,397 - ECD_03708 0.65 +0.3
3,907,453 + ECD_03708 0.68 -1.1
3,907,453 + ECD_03708 0.68 +0.1
3,907,453 + ECD_03708 0.68 -0.3
3,907,454 - ECD_03708 0.68 -0.6
3,907,535 - ECD_03708 0.71 +0.5
3,907,554 + ECD_03708 0.72 +0.0
3,907,592 + ECD_03708 0.74 +1.6
3,907,768 + ECD_03708 0.82 +1.5
3,907,769 - ECD_03708 0.82 +1.0
3,907,785 - ECD_03708 0.82 +0.3
3,908,186 + +0.2
3,908,186 + -0.3
3,908,202 + -1.1
3,908,217 + -0.5
3,908,217 + -0.1
3,908,217 + -0.0
3,908,248 + -0.4
3,908,248 + -0.3
3,908,252 + -0.4
3,908,252 + +0.7
3,908,252 + +0.5
3,908,252 + +0.2
3,908,252 + +0.3
3,908,253 - +0.2
3,908,253 - +0.2
3,908,253 - +0.5
3,908,253 - -0.1
3,908,253 - +0.7
3,908,253 - -0.3
3,908,253 - -0.1
3,908,253 - -0.2
3,908,253 - +0.6
3,908,253 - +0.5
3,908,253 - +0.5
3,908,253 - +0.9
3,908,262 - +1.2
3,908,290 + +0.2
3,908,309 + +0.8
3,908,310 - +1.7
3,908,310 - +0.7
3,908,314 + -0.8
3,908,341 - +0.2
3,908,365 + ECD_03709 0.10 +0.5
3,908,383 - ECD_03709 0.12 +0.5
3,908,383 - ECD_03709 0.12 -0.6
3,908,403 + ECD_03709 0.14 +0.4
3,908,403 + ECD_03709 0.14 +0.5
3,908,412 + ECD_03709 0.15 -0.5
3,908,412 + ECD_03709 0.15 -0.0
3,908,413 - ECD_03709 0.15 -0.7
3,908,452 - ECD_03709 0.20 +0.2
3,908,452 - ECD_03709 0.20 +0.5
3,908,454 - ECD_03709 0.20 +0.7
3,908,476 + ECD_03709 0.22 -0.3
3,908,476 + ECD_03709 0.22 +1.2
3,908,476 + ECD_03709 0.22 +0.5
3,908,476 + ECD_03709 0.22 +0.6
3,908,477 - ECD_03709 0.23 +1.3
3,908,477 - ECD_03709 0.23 +0.5
3,908,479 + ECD_03709 0.23 +0.2
3,908,560 - ECD_03709 0.32 +0.5
3,908,560 - ECD_03709 0.32 +0.0
3,908,732 + ECD_03709 0.51 +0.6
3,908,733 - ECD_03709 0.51 -0.1
3,908,733 - ECD_03709 0.51 +0.3
3,908,756 + ECD_03709 0.54 +1.0
3,908,757 - ECD_03709 0.54 +1.5
3,908,780 + ECD_03709 0.56 -0.4
3,908,780 + ECD_03709 0.56 +0.5
3,908,780 + ECD_03709 0.56 +1.1
3,908,781 - ECD_03709 0.56 -0.1
3,908,781 - ECD_03709 0.56 +0.2
3,908,781 - ECD_03709 0.56 -0.3
3,908,781 - ECD_03709 0.56 +0.7
3,908,781 - ECD_03709 0.56 +0.2
3,908,782 + ECD_03709 0.57 +0.6
3,908,782 + ECD_03709 0.57 +0.2
3,908,783 - ECD_03709 0.57 +0.6
3,908,783 - ECD_03709 0.57 +0.7
3,908,794 + ECD_03709 0.58 +0.7
3,908,866 - ECD_03709 0.66 -0.5
3,908,869 - ECD_03709 0.66 +0.6
3,908,901 + ECD_03709 0.70 -0.2
3,908,964 + ECD_03709 0.77 -0.1
3,908,978 + ECD_03709 0.78 +0.1
3,908,978 + ECD_03709 0.78 +0.5
3,908,978 + ECD_03709 0.78 +0.5
3,908,979 - ECD_03709 0.78 +0.0
3,908,979 - ECD_03709 0.78 -0.2
3,908,979 - ECD_03709 0.78 -0.3
3,908,979 - ECD_03709 0.78 +0.3
3,909,004 - ECD_03709 0.81 -0.1
3,909,004 - ECD_03709 0.81 +0.6
3,909,005 + ECD_03709 0.81 -0.4
3,909,005 + ECD_03709 0.81 +0.5
3,909,005 + ECD_03709 0.81 -0.4
3,909,005 + ECD_03709 0.81 +0.2
3,909,005 + ECD_03709 0.81 +0.3
3,909,005 + ECD_03709 0.81 +0.1
3,909,006 - ECD_03709 0.81 -0.5
3,909,006 - ECD_03709 0.81 +0.2
3,909,065 + ECD_03709 0.88 +0.2
3,909,066 - ECD_03709 0.88 -1.4
3,909,066 - ECD_03709 0.88 +0.3
3,909,087 + +0.5
3,909,088 - +0.8
3,909,088 - +0.5
3,909,088 - +0.4
3,909,091 + +0.3
3,909,092 - +0.1
3,909,111 + +0.5
3,909,111 + -0.6
3,909,171 + -0.3
3,909,171 + +0.5
3,909,171 + +0.1
3,909,171 + +0.2
3,909,171 + -0.5
3,909,171 + -0.2
3,909,171 + +0.6
3,909,172 - +0.3
3,909,172 - +0.1
3,909,172 - +1.1
3,909,172 - +0.2
3,909,191 + +0.4
3,909,192 - +0.2
3,909,192 - -0.4
3,909,237 + +0.3
3,909,237 + +0.1
3,909,237 + +0.8
3,909,237 + -0.8
3,909,238 - -1.0
3,909,238 - +0.3
3,909,238 - +1.3
3,909,290 + +1.5
3,909,290 + +0.4
3,909,291 - +1.1
3,909,339 + +0.1
3,909,339 + -0.5
3,909,339 + +0.2
3,909,340 - -2.1
3,909,349 - +0.4
3,909,356 + -0.5
3,909,405 - ECD_03710 0.13 -0.3
3,909,424 - ECD_03710 0.14 +0.8
3,909,475 + ECD_03710 0.18 -0.8
3,909,475 + ECD_03710 0.18 +0.8
3,909,476 - ECD_03710 0.19 +0.5
3,909,528 - ECD_03710 0.23 +0.2
3,909,539 + ECD_03710 0.24 -0.3
3,909,539 + ECD_03710 0.24 +0.3
3,909,539 + ECD_03710 0.24 +0.9
3,909,647 + ECD_03710 0.33 +0.5
3,909,647 + ECD_03710 0.33 +0.1
3,909,647 + ECD_03710 0.33 -0.1
3,909,647 + ECD_03710 0.33 +0.3
3,909,648 - ECD_03710 0.33 +0.0
3,909,790 + ECD_03710 0.44 +0.9
3,909,851 + ECD_03710 0.49 -0.8
3,909,884 + ECD_03710 0.52 +0.5
3,909,885 - ECD_03710 0.52 -0.3
3,909,974 - ECD_03710 0.59 +0.6
3,909,974 - ECD_03710 0.59 +0.4
3,909,982 + ECD_03710 0.60 -0.1
3,909,982 + ECD_03710 0.60 +0.6
3,909,982 + ECD_03710 0.60 -0.4
3,909,982 + ECD_03710 0.60 +0.8
3,909,982 + ECD_03710 0.60 -0.2
3,909,983 - ECD_03710 0.60 +0.4
3,909,983 - ECD_03710 0.60 +0.1
3,909,983 - ECD_03710 0.60 +1.2
3,909,983 - ECD_03710 0.60 +0.1
3,910,089 + ECD_03710 0.69 +0.9
3,910,129 - ECD_03710 0.72 +0.3
3,910,137 + ECD_03710 0.73 -0.1
3,910,138 - ECD_03710 0.73 -0.1
3,910,138 - ECD_03710 0.73 +0.0
3,910,154 + ECD_03710 0.74 +1.7
3,910,154 + ECD_03710 0.74 -0.8
3,910,154 + ECD_03710 0.74 +0.2
3,910,155 - ECD_03710 0.74 -0.1
3,910,155 - ECD_03710 0.74 +0.2
3,910,155 - ECD_03710 0.74 -0.2

Or see this region's nucleotide sequence