Strain Fitness in Escherichia coli BL21 around ECD_03700

Experiment: Laval1261

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03698 and ECD_03699 are separated by 51 nucleotidesECD_03699 and ECD_03700 are separated by 164 nucleotidesECD_03700 and ECD_03701 are separated by 118 nucleotides ECD_03698: ECD_03698 - putative chloramphenical resistance permease, at 3,896,163 to 3,897,053 _03698 ECD_03699: ECD_03699 - 4HBT thioesterase family protein, at 3,897,105 to 3,897,572 _03699 ECD_03700: ECD_03700 - outer membrane phospholipase A, at 3,897,737 to 3,898,606 _03700 ECD_03701: ECD_03701 - ATP-dependent DNA helicase, at 3,898,725 to 3,900,560 _03701 Position (kb) 3897 3898 3899Strain fitness (log2 ratio) -1 0 1 2at 3896.737 kb on + strand, within ECD_03698at 3896.759 kb on + strand, within ECD_03698at 3896.959 kb on + strand, within ECD_03698at 3896.959 kb on + strand, within ECD_03698at 3896.962 kb on + strand, within ECD_03698at 3896.963 kb on - strand, within ECD_03698at 3896.977 kb on + strandat 3896.977 kb on + strandat 3896.977 kb on + strandat 3896.978 kb on - strandat 3896.978 kb on - strandat 3896.988 kb on + strandat 3897.005 kb on - strandat 3897.025 kb on - strandat 3897.111 kb on + strandat 3897.111 kb on + strandat 3897.111 kb on + strandat 3897.112 kb on - strandat 3897.112 kb on - strandat 3897.112 kb on - strandat 3897.112 kb on - strandat 3897.112 kb on - strandat 3897.112 kb on - strandat 3897.116 kb on + strandat 3897.117 kb on - strandat 3897.118 kb on + strandat 3897.118 kb on + strandat 3897.118 kb on + strandat 3897.118 kb on + strandat 3897.118 kb on + strandat 3897.118 kb on + strandat 3897.118 kb on + strandat 3897.118 kb on + strandat 3897.119 kb on - strandat 3897.119 kb on - strandat 3897.119 kb on - strandat 3897.119 kb on - strandat 3897.119 kb on - strandat 3897.119 kb on - strandat 3897.119 kb on - strandat 3897.140 kb on + strandat 3897.142 kb on + strandat 3897.142 kb on + strandat 3897.142 kb on + strandat 3897.143 kb on - strandat 3897.143 kb on - strandat 3897.143 kb on - strandat 3897.143 kb on - strandat 3897.221 kb on + strand, within ECD_03699at 3897.298 kb on - strand, within ECD_03699at 3897.298 kb on - strand, within ECD_03699at 3897.298 kb on - strand, within ECD_03699at 3897.335 kb on + strand, within ECD_03699at 3897.335 kb on + strand, within ECD_03699at 3897.335 kb on + strand, within ECD_03699at 3897.336 kb on - strand, within ECD_03699at 3897.534 kb on + strandat 3897.572 kb on + strandat 3897.573 kb on - strandat 3897.573 kb on - strandat 3897.573 kb on - strandat 3897.573 kb on - strandat 3897.581 kb on + strandat 3897.581 kb on + strandat 3897.581 kb on + strandat 3897.582 kb on - strandat 3897.582 kb on - strandat 3897.582 kb on - strandat 3897.582 kb on - strandat 3897.635 kb on + strandat 3897.636 kb on - strandat 3897.650 kb on + strandat 3897.669 kb on + strandat 3897.670 kb on - strandat 3897.670 kb on - strandat 3897.670 kb on - strandat 3897.673 kb on + strandat 3897.674 kb on - strandat 3897.674 kb on - strandat 3897.674 kb on - strandat 3897.772 kb on + strandat 3897.773 kb on - strandat 3897.773 kb on - strandat 3897.789 kb on + strandat 3897.789 kb on + strandat 3897.789 kb on + strandat 3897.790 kb on - strandat 3897.790 kb on - strandat 3897.790 kb on - strandat 3897.791 kb on + strandat 3897.791 kb on + strandat 3897.791 kb on + strandat 3897.791 kb on + strandat 3897.791 kb on + strandat 3897.791 kb on + strandat 3897.791 kb on + strandat 3897.792 kb on - strandat 3897.792 kb on - strandat 3897.792 kb on - strandat 3897.847 kb on + strand, within ECD_03700at 3897.848 kb on - strand, within ECD_03700at 3897.848 kb on - strand, within ECD_03700at 3897.859 kb on + strand, within ECD_03700at 3897.859 kb on + strand, within ECD_03700at 3897.860 kb on - strand, within ECD_03700at 3897.860 kb on - strand, within ECD_03700at 3897.894 kb on - strand, within ECD_03700at 3897.899 kb on + strand, within ECD_03700at 3897.899 kb on + strand, within ECD_03700at 3897.911 kb on + strand, within ECD_03700at 3897.911 kb on + strand, within ECD_03700at 3897.911 kb on + strand, within ECD_03700at 3897.911 kb on + strand, within ECD_03700at 3897.911 kb on + strand, within ECD_03700at 3897.912 kb on - strand, within ECD_03700at 3897.912 kb on - strand, within ECD_03700at 3897.912 kb on - strand, within ECD_03700at 3897.920 kb on + strand, within ECD_03700at 3897.921 kb on - strand, within ECD_03700at 3897.921 kb on - strand, within ECD_03700at 3897.921 kb on - strand, within ECD_03700at 3897.921 kb on - strand, within ECD_03700at 3897.921 kb on - strand, within ECD_03700at 3897.921 kb on - strand, within ECD_03700at 3898.042 kb on - strand, within ECD_03700at 3898.072 kb on + strand, within ECD_03700at 3898.099 kb on + strand, within ECD_03700at 3898.100 kb on - strand, within ECD_03700at 3898.102 kb on + strand, within ECD_03700at 3898.102 kb on + strand, within ECD_03700at 3898.136 kb on + strand, within ECD_03700at 3898.136 kb on + strand, within ECD_03700at 3898.137 kb on - strand, within ECD_03700at 3898.172 kb on + strand, within ECD_03700at 3898.271 kb on + strand, within ECD_03700at 3898.272 kb on - strand, within ECD_03700at 3898.272 kb on - strand, within ECD_03700at 3898.325 kb on + strand, within ECD_03700at 3898.326 kb on - strand, within ECD_03700at 3898.326 kb on - strand, within ECD_03700at 3898.326 kb on - strand, within ECD_03700at 3898.326 kb on - strand, within ECD_03700at 3898.326 kb on - strand, within ECD_03700at 3898.326 kb on - strand, within ECD_03700at 3898.367 kb on + strand, within ECD_03700at 3898.367 kb on + strand, within ECD_03700at 3898.367 kb on + strand, within ECD_03700at 3898.367 kb on + strand, within ECD_03700at 3898.367 kb on + strand, within ECD_03700at 3898.367 kb on + strand, within ECD_03700at 3898.367 kb on + strand, within ECD_03700at 3898.368 kb on - strand, within ECD_03700at 3898.368 kb on - strand, within ECD_03700at 3898.368 kb on - strand, within ECD_03700at 3898.368 kb on - strand, within ECD_03700at 3898.368 kb on - strand, within ECD_03700at 3898.376 kb on + strand, within ECD_03700at 3898.377 kb on - strand, within ECD_03700at 3898.398 kb on - strand, within ECD_03700at 3898.437 kb on - strand, within ECD_03700at 3898.471 kb on - strand, within ECD_03700at 3898.476 kb on + strand, within ECD_03700at 3898.476 kb on + strand, within ECD_03700at 3898.476 kb on + strand, within ECD_03700at 3898.476 kb on + strand, within ECD_03700at 3898.476 kb on + strand, within ECD_03700at 3898.477 kb on - strand, within ECD_03700at 3898.477 kb on - strand, within ECD_03700at 3898.477 kb on - strand, within ECD_03700at 3898.508 kb on + strand, within ECD_03700at 3898.509 kb on - strand, within ECD_03700at 3898.510 kb on + strand, within ECD_03700at 3898.550 kb on + strandat 3898.550 kb on + strandat 3898.552 kb on + strandat 3898.552 kb on + strandat 3898.553 kb on - strandat 3898.553 kb on - strandat 3898.553 kb on - strandat 3898.585 kb on + strandat 3898.586 kb on - strandat 3898.586 kb on - strandat 3898.586 kb on - strandat 3898.586 kb on - strandat 3898.586 kb on - strandat 3898.586 kb on - strandat 3898.586 kb on - strandat 3898.695 kb on + strandat 3899.051 kb on + strand, within ECD_03701at 3899.088 kb on + strand, within ECD_03701at 3899.089 kb on - strand, within ECD_03701at 3899.089 kb on - strand, within ECD_03701at 3899.089 kb on - strand, within ECD_03701at 3899.117 kb on + strand, within ECD_03701at 3899.180 kb on + strand, within ECD_03701at 3899.180 kb on + strand, within ECD_03701at 3899.180 kb on + strand, within ECD_03701at 3899.180 kb on + strand, within ECD_03701at 3899.181 kb on - strand, within ECD_03701at 3899.181 kb on - strand, within ECD_03701at 3899.181 kb on - strand, within ECD_03701at 3899.181 kb on - strand, within ECD_03701at 3899.373 kb on + strand, within ECD_03701at 3899.374 kb on - strand, within ECD_03701at 3899.439 kb on - strand, within ECD_03701at 3899.451 kb on - strand, within ECD_03701at 3899.451 kb on - strand, within ECD_03701at 3899.451 kb on - strand, within ECD_03701at 3899.451 kb on - strand, within ECD_03701at 3899.451 kb on - strand, within ECD_03701at 3899.454 kb on + strand, within ECD_03701at 3899.476 kb on + strand, within ECD_03701at 3899.526 kb on + strand, within ECD_03701at 3899.546 kb on + strand, within ECD_03701at 3899.546 kb on + strand, within ECD_03701

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1261
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3,896,737 + ECD_03698 0.64 -0.5
3,896,759 + ECD_03698 0.67 +0.2
3,896,959 + ECD_03698 0.89 -0.0
3,896,959 + ECD_03698 0.89 +0.2
3,896,962 + ECD_03698 0.90 -0.1
3,896,963 - ECD_03698 0.90 -0.4
3,896,977 + +0.6
3,896,977 + +0.1
3,896,977 + -0.0
3,896,978 - +0.0
3,896,978 - +1.5
3,896,988 + -0.6
3,897,005 - -0.4
3,897,025 - +0.0
3,897,111 + +0.4
3,897,111 + +0.0
3,897,111 + +0.3
3,897,112 - -0.7
3,897,112 - -0.1
3,897,112 - -0.7
3,897,112 - -0.3
3,897,112 - +0.4
3,897,112 - -0.2
3,897,116 + +0.2
3,897,117 - -0.6
3,897,118 + +0.2
3,897,118 + -0.2
3,897,118 + +0.5
3,897,118 + -0.1
3,897,118 + +0.0
3,897,118 + +0.0
3,897,118 + +0.6
3,897,118 + +0.5
3,897,119 - +0.6
3,897,119 - -0.8
3,897,119 - +0.5
3,897,119 - +0.8
3,897,119 - +0.4
3,897,119 - +0.0
3,897,119 - -0.8
3,897,140 + +0.5
3,897,142 + +0.2
3,897,142 + -0.6
3,897,142 + +0.2
3,897,143 - +0.2
3,897,143 - -0.3
3,897,143 - -0.5
3,897,143 - +0.9
3,897,221 + ECD_03699 0.25 +0.3
3,897,298 - ECD_03699 0.41 -0.0
3,897,298 - ECD_03699 0.41 +0.3
3,897,298 - ECD_03699 0.41 -0.8
3,897,335 + ECD_03699 0.49 -0.5
3,897,335 + ECD_03699 0.49 +0.6
3,897,335 + ECD_03699 0.49 +0.5
3,897,336 - ECD_03699 0.49 +0.1
3,897,534 + +1.0
3,897,572 + -0.3
3,897,573 - +0.5
3,897,573 - -0.2
3,897,573 - +0.4
3,897,573 - +0.8
3,897,581 + +0.6
3,897,581 + +0.7
3,897,581 + +0.2
3,897,582 - +0.4
3,897,582 - +0.1
3,897,582 - -0.0
3,897,582 - +0.2
3,897,635 + +0.4
3,897,636 - +0.6
3,897,650 + +0.2
3,897,669 + -0.4
3,897,670 - +0.4
3,897,670 - -0.1
3,897,670 - +0.3
3,897,673 + +0.2
3,897,674 - +0.6
3,897,674 - -0.7
3,897,674 - +0.5
3,897,772 + -0.0
3,897,773 - -0.3
3,897,773 - +0.2
3,897,789 + +1.3
3,897,789 + +0.6
3,897,789 + -1.1
3,897,790 - -0.3
3,897,790 - +0.7
3,897,790 - +0.8
3,897,791 + -0.0
3,897,791 + +0.2
3,897,791 + -0.0
3,897,791 + +0.8
3,897,791 + +0.8
3,897,791 + -0.0
3,897,791 + +0.5
3,897,792 - -0.1
3,897,792 - -0.7
3,897,792 - +0.7
3,897,847 + ECD_03700 0.13 +0.2
3,897,848 - ECD_03700 0.13 +0.6
3,897,848 - ECD_03700 0.13 +0.2
3,897,859 + ECD_03700 0.14 +0.8
3,897,859 + ECD_03700 0.14 +0.1
3,897,860 - ECD_03700 0.14 +0.8
3,897,860 - ECD_03700 0.14 +1.7
3,897,894 - ECD_03700 0.18 -0.4
3,897,899 + ECD_03700 0.19 +0.6
3,897,899 + ECD_03700 0.19 -0.0
3,897,911 + ECD_03700 0.20 -0.8
3,897,911 + ECD_03700 0.20 +0.2
3,897,911 + ECD_03700 0.20 +1.7
3,897,911 + ECD_03700 0.20 +1.1
3,897,911 + ECD_03700 0.20 +0.3
3,897,912 - ECD_03700 0.20 +0.5
3,897,912 - ECD_03700 0.20 +0.2
3,897,912 - ECD_03700 0.20 +0.3
3,897,920 + ECD_03700 0.21 +0.2
3,897,921 - ECD_03700 0.21 +0.7
3,897,921 - ECD_03700 0.21 -0.3
3,897,921 - ECD_03700 0.21 +0.4
3,897,921 - ECD_03700 0.21 -0.1
3,897,921 - ECD_03700 0.21 -0.1
3,897,921 - ECD_03700 0.21 +0.4
3,898,042 - ECD_03700 0.35 +0.5
3,898,072 + ECD_03700 0.39 +0.4
3,898,099 + ECD_03700 0.42 -0.4
3,898,100 - ECD_03700 0.42 -0.1
3,898,102 + ECD_03700 0.42 +0.2
3,898,102 + ECD_03700 0.42 -0.7
3,898,136 + ECD_03700 0.46 +0.6
3,898,136 + ECD_03700 0.46 -0.6
3,898,137 - ECD_03700 0.46 +0.3
3,898,172 + ECD_03700 0.50 -1.2
3,898,271 + ECD_03700 0.61 +0.2
3,898,272 - ECD_03700 0.61 +0.1
3,898,272 - ECD_03700 0.61 +0.4
3,898,325 + ECD_03700 0.68 +0.5
3,898,326 - ECD_03700 0.68 +0.5
3,898,326 - ECD_03700 0.68 +1.1
3,898,326 - ECD_03700 0.68 +0.5
3,898,326 - ECD_03700 0.68 +0.1
3,898,326 - ECD_03700 0.68 +0.1
3,898,326 - ECD_03700 0.68 +0.3
3,898,367 + ECD_03700 0.72 +0.3
3,898,367 + ECD_03700 0.72 +1.5
3,898,367 + ECD_03700 0.72 +0.8
3,898,367 + ECD_03700 0.72 +0.5
3,898,367 + ECD_03700 0.72 +0.4
3,898,367 + ECD_03700 0.72 +0.3
3,898,367 + ECD_03700 0.72 +0.3
3,898,368 - ECD_03700 0.73 +1.0
3,898,368 - ECD_03700 0.73 +0.3
3,898,368 - ECD_03700 0.73 +0.7
3,898,368 - ECD_03700 0.73 -0.1
3,898,368 - ECD_03700 0.73 +0.0
3,898,376 + ECD_03700 0.73 -0.1
3,898,377 - ECD_03700 0.74 -0.0
3,898,398 - ECD_03700 0.76 -0.3
3,898,437 - ECD_03700 0.80 +0.8
3,898,471 - ECD_03700 0.84 +1.0
3,898,476 + ECD_03700 0.85 -0.3
3,898,476 + ECD_03700 0.85 +0.3
3,898,476 + ECD_03700 0.85 +0.1
3,898,476 + ECD_03700 0.85 +0.7
3,898,476 + ECD_03700 0.85 +0.2
3,898,477 - ECD_03700 0.85 +0.7
3,898,477 - ECD_03700 0.85 +0.3
3,898,477 - ECD_03700 0.85 +0.8
3,898,508 + ECD_03700 0.89 +0.1
3,898,509 - ECD_03700 0.89 +1.1
3,898,510 + ECD_03700 0.89 -0.7
3,898,550 + -0.5
3,898,550 + +2.3
3,898,552 + +0.7
3,898,552 + +0.0
3,898,553 - +0.1
3,898,553 - +0.8
3,898,553 - +0.7
3,898,585 + -0.5
3,898,586 - +0.5
3,898,586 - -0.4
3,898,586 - +0.5
3,898,586 - +0.9
3,898,586 - +0.7
3,898,586 - -0.1
3,898,586 - -0.4
3,898,695 + +0.5
3,899,051 + ECD_03701 0.18 +0.2
3,899,088 + ECD_03701 0.20 +0.3
3,899,089 - ECD_03701 0.20 -0.1
3,899,089 - ECD_03701 0.20 +0.4
3,899,089 - ECD_03701 0.20 +0.3
3,899,117 + ECD_03701 0.21 -0.5
3,899,180 + ECD_03701 0.25 +0.7
3,899,180 + ECD_03701 0.25 -0.7
3,899,180 + ECD_03701 0.25 -0.1
3,899,180 + ECD_03701 0.25 -0.8
3,899,181 - ECD_03701 0.25 +1.3
3,899,181 - ECD_03701 0.25 +0.4
3,899,181 - ECD_03701 0.25 -0.5
3,899,181 - ECD_03701 0.25 -1.7
3,899,373 + ECD_03701 0.35 +0.2
3,899,374 - ECD_03701 0.35 -0.2
3,899,439 - ECD_03701 0.39 -0.5
3,899,451 - ECD_03701 0.40 -0.3
3,899,451 - ECD_03701 0.40 -0.1
3,899,451 - ECD_03701 0.40 -0.2
3,899,451 - ECD_03701 0.40 +0.2
3,899,451 - ECD_03701 0.40 -0.8
3,899,454 + ECD_03701 0.40 +0.3
3,899,476 + ECD_03701 0.41 -1.0
3,899,526 + ECD_03701 0.44 -1.4
3,899,546 + ECD_03701 0.45 -0.1
3,899,546 + ECD_03701 0.45 +0.5

Or see this region's nucleotide sequence