Experiment: Laval1261
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03698 and ECD_03699 are separated by 51 nucleotides ECD_03699 and ECD_03700 are separated by 164 nucleotides ECD_03700 and ECD_03701 are separated by 118 nucleotides
ECD_03698: ECD_03698 - putative chloramphenical resistance permease, at 3,896,163 to 3,897,053
_03698
ECD_03699: ECD_03699 - 4HBT thioesterase family protein, at 3,897,105 to 3,897,572
_03699
ECD_03700: ECD_03700 - outer membrane phospholipase A, at 3,897,737 to 3,898,606
_03700
ECD_03701: ECD_03701 - ATP-dependent DNA helicase, at 3,898,725 to 3,900,560
_03701
Position (kb)
3897
3898
3899 Strain fitness (log2 ratio)
-1
0
1
2 at 3896.737 kb on + strand, within ECD_03698 at 3896.759 kb on + strand, within ECD_03698 at 3896.959 kb on + strand, within ECD_03698 at 3896.959 kb on + strand, within ECD_03698 at 3896.962 kb on + strand, within ECD_03698 at 3896.963 kb on - strand, within ECD_03698 at 3896.977 kb on + strand at 3896.977 kb on + strand at 3896.977 kb on + strand at 3896.978 kb on - strand at 3896.978 kb on - strand at 3896.988 kb on + strand at 3897.005 kb on - strand at 3897.025 kb on - strand at 3897.111 kb on + strand at 3897.111 kb on + strand at 3897.111 kb on + strand at 3897.112 kb on - strand at 3897.112 kb on - strand at 3897.112 kb on - strand at 3897.112 kb on - strand at 3897.112 kb on - strand at 3897.112 kb on - strand at 3897.116 kb on + strand at 3897.117 kb on - strand at 3897.118 kb on + strand at 3897.118 kb on + strand at 3897.118 kb on + strand at 3897.118 kb on + strand at 3897.118 kb on + strand at 3897.118 kb on + strand at 3897.118 kb on + strand at 3897.118 kb on + strand at 3897.119 kb on - strand at 3897.119 kb on - strand at 3897.119 kb on - strand at 3897.119 kb on - strand at 3897.119 kb on - strand at 3897.119 kb on - strand at 3897.119 kb on - strand at 3897.140 kb on + strand at 3897.142 kb on + strand at 3897.142 kb on + strand at 3897.142 kb on + strand at 3897.143 kb on - strand at 3897.143 kb on - strand at 3897.143 kb on - strand at 3897.143 kb on - strand at 3897.221 kb on + strand, within ECD_03699 at 3897.298 kb on - strand, within ECD_03699 at 3897.298 kb on - strand, within ECD_03699 at 3897.298 kb on - strand, within ECD_03699 at 3897.335 kb on + strand, within ECD_03699 at 3897.335 kb on + strand, within ECD_03699 at 3897.335 kb on + strand, within ECD_03699 at 3897.336 kb on - strand, within ECD_03699 at 3897.534 kb on + strand at 3897.572 kb on + strand at 3897.573 kb on - strand at 3897.573 kb on - strand at 3897.573 kb on - strand at 3897.573 kb on - strand at 3897.581 kb on + strand at 3897.581 kb on + strand at 3897.581 kb on + strand at 3897.582 kb on - strand at 3897.582 kb on - strand at 3897.582 kb on - strand at 3897.582 kb on - strand at 3897.635 kb on + strand at 3897.636 kb on - strand at 3897.650 kb on + strand at 3897.669 kb on + strand at 3897.670 kb on - strand at 3897.670 kb on - strand at 3897.670 kb on - strand at 3897.673 kb on + strand at 3897.674 kb on - strand at 3897.674 kb on - strand at 3897.674 kb on - strand at 3897.772 kb on + strand at 3897.773 kb on - strand at 3897.773 kb on - strand at 3897.789 kb on + strand at 3897.789 kb on + strand at 3897.789 kb on + strand at 3897.790 kb on - strand at 3897.790 kb on - strand at 3897.790 kb on - strand at 3897.791 kb on + strand at 3897.791 kb on + strand at 3897.791 kb on + strand at 3897.791 kb on + strand at 3897.791 kb on + strand at 3897.791 kb on + strand at 3897.791 kb on + strand at 3897.792 kb on - strand at 3897.792 kb on - strand at 3897.792 kb on - strand at 3897.847 kb on + strand, within ECD_03700 at 3897.848 kb on - strand, within ECD_03700 at 3897.848 kb on - strand, within ECD_03700 at 3897.859 kb on + strand, within ECD_03700 at 3897.859 kb on + strand, within ECD_03700 at 3897.860 kb on - strand, within ECD_03700 at 3897.860 kb on - strand, within ECD_03700 at 3897.894 kb on - strand, within ECD_03700 at 3897.899 kb on + strand, within ECD_03700 at 3897.899 kb on + strand, within ECD_03700 at 3897.911 kb on + strand, within ECD_03700 at 3897.911 kb on + strand, within ECD_03700 at 3897.911 kb on + strand, within ECD_03700 at 3897.911 kb on + strand, within ECD_03700 at 3897.911 kb on + strand, within ECD_03700 at 3897.912 kb on - strand, within ECD_03700 at 3897.912 kb on - strand, within ECD_03700 at 3897.912 kb on - strand, within ECD_03700 at 3897.920 kb on + strand, within ECD_03700 at 3897.921 kb on - strand, within ECD_03700 at 3897.921 kb on - strand, within ECD_03700 at 3897.921 kb on - strand, within ECD_03700 at 3897.921 kb on - strand, within ECD_03700 at 3897.921 kb on - strand, within ECD_03700 at 3897.921 kb on - strand, within ECD_03700 at 3898.042 kb on - strand, within ECD_03700 at 3898.072 kb on + strand, within ECD_03700 at 3898.099 kb on + strand, within ECD_03700 at 3898.100 kb on - strand, within ECD_03700 at 3898.102 kb on + strand, within ECD_03700 at 3898.102 kb on + strand, within ECD_03700 at 3898.136 kb on + strand, within ECD_03700 at 3898.136 kb on + strand, within ECD_03700 at 3898.137 kb on - strand, within ECD_03700 at 3898.172 kb on + strand, within ECD_03700 at 3898.271 kb on + strand, within ECD_03700 at 3898.272 kb on - strand, within ECD_03700 at 3898.272 kb on - strand, within ECD_03700 at 3898.325 kb on + strand, within ECD_03700 at 3898.326 kb on - strand, within ECD_03700 at 3898.326 kb on - strand, within ECD_03700 at 3898.326 kb on - strand, within ECD_03700 at 3898.326 kb on - strand, within ECD_03700 at 3898.326 kb on - strand, within ECD_03700 at 3898.326 kb on - strand, within ECD_03700 at 3898.367 kb on + strand, within ECD_03700 at 3898.367 kb on + strand, within ECD_03700 at 3898.367 kb on + strand, within ECD_03700 at 3898.367 kb on + strand, within ECD_03700 at 3898.367 kb on + strand, within ECD_03700 at 3898.367 kb on + strand, within ECD_03700 at 3898.367 kb on + strand, within ECD_03700 at 3898.368 kb on - strand, within ECD_03700 at 3898.368 kb on - strand, within ECD_03700 at 3898.368 kb on - strand, within ECD_03700 at 3898.368 kb on - strand, within ECD_03700 at 3898.368 kb on - strand, within ECD_03700 at 3898.376 kb on + strand, within ECD_03700 at 3898.377 kb on - strand, within ECD_03700 at 3898.398 kb on - strand, within ECD_03700 at 3898.437 kb on - strand, within ECD_03700 at 3898.471 kb on - strand, within ECD_03700 at 3898.476 kb on + strand, within ECD_03700 at 3898.476 kb on + strand, within ECD_03700 at 3898.476 kb on + strand, within ECD_03700 at 3898.476 kb on + strand, within ECD_03700 at 3898.476 kb on + strand, within ECD_03700 at 3898.477 kb on - strand, within ECD_03700 at 3898.477 kb on - strand, within ECD_03700 at 3898.477 kb on - strand, within ECD_03700 at 3898.508 kb on + strand, within ECD_03700 at 3898.509 kb on - strand, within ECD_03700 at 3898.510 kb on + strand, within ECD_03700 at 3898.550 kb on + strand at 3898.550 kb on + strand at 3898.552 kb on + strand at 3898.552 kb on + strand at 3898.553 kb on - strand at 3898.553 kb on - strand at 3898.553 kb on - strand at 3898.585 kb on + strand at 3898.586 kb on - strand at 3898.586 kb on - strand at 3898.586 kb on - strand at 3898.586 kb on - strand at 3898.586 kb on - strand at 3898.586 kb on - strand at 3898.586 kb on - strand at 3898.695 kb on + strand at 3899.051 kb on + strand, within ECD_03701 at 3899.088 kb on + strand, within ECD_03701 at 3899.089 kb on - strand, within ECD_03701 at 3899.089 kb on - strand, within ECD_03701 at 3899.089 kb on - strand, within ECD_03701 at 3899.117 kb on + strand, within ECD_03701 at 3899.180 kb on + strand, within ECD_03701 at 3899.180 kb on + strand, within ECD_03701 at 3899.180 kb on + strand, within ECD_03701 at 3899.180 kb on + strand, within ECD_03701 at 3899.181 kb on - strand, within ECD_03701 at 3899.181 kb on - strand, within ECD_03701 at 3899.181 kb on - strand, within ECD_03701 at 3899.181 kb on - strand, within ECD_03701 at 3899.373 kb on + strand, within ECD_03701 at 3899.374 kb on - strand, within ECD_03701 at 3899.439 kb on - strand, within ECD_03701 at 3899.451 kb on - strand, within ECD_03701 at 3899.451 kb on - strand, within ECD_03701 at 3899.451 kb on - strand, within ECD_03701 at 3899.451 kb on - strand, within ECD_03701 at 3899.451 kb on - strand, within ECD_03701 at 3899.454 kb on + strand, within ECD_03701 at 3899.476 kb on + strand, within ECD_03701 at 3899.526 kb on + strand, within ECD_03701 at 3899.546 kb on + strand, within ECD_03701 at 3899.546 kb on + strand, within ECD_03701
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1261 remove 3,896,737 + ECD_03698 0.64 -0.5 3,896,759 + ECD_03698 0.67 +0.2 3,896,959 + ECD_03698 0.89 -0.0 3,896,959 + ECD_03698 0.89 +0.2 3,896,962 + ECD_03698 0.90 -0.1 3,896,963 - ECD_03698 0.90 -0.4 3,896,977 + +0.6 3,896,977 + +0.1 3,896,977 + -0.0 3,896,978 - +0.0 3,896,978 - +1.5 3,896,988 + -0.6 3,897,005 - -0.4 3,897,025 - +0.0 3,897,111 + +0.4 3,897,111 + +0.0 3,897,111 + +0.3 3,897,112 - -0.7 3,897,112 - -0.1 3,897,112 - -0.7 3,897,112 - -0.3 3,897,112 - +0.4 3,897,112 - -0.2 3,897,116 + +0.2 3,897,117 - -0.6 3,897,118 + +0.2 3,897,118 + -0.2 3,897,118 + +0.5 3,897,118 + -0.1 3,897,118 + +0.0 3,897,118 + +0.0 3,897,118 + +0.6 3,897,118 + +0.5 3,897,119 - +0.6 3,897,119 - -0.8 3,897,119 - +0.5 3,897,119 - +0.8 3,897,119 - +0.4 3,897,119 - +0.0 3,897,119 - -0.8 3,897,140 + +0.5 3,897,142 + +0.2 3,897,142 + -0.6 3,897,142 + +0.2 3,897,143 - +0.2 3,897,143 - -0.3 3,897,143 - -0.5 3,897,143 - +0.9 3,897,221 + ECD_03699 0.25 +0.3 3,897,298 - ECD_03699 0.41 -0.0 3,897,298 - ECD_03699 0.41 +0.3 3,897,298 - ECD_03699 0.41 -0.8 3,897,335 + ECD_03699 0.49 -0.5 3,897,335 + ECD_03699 0.49 +0.6 3,897,335 + ECD_03699 0.49 +0.5 3,897,336 - ECD_03699 0.49 +0.1 3,897,534 + +1.0 3,897,572 + -0.3 3,897,573 - +0.5 3,897,573 - -0.2 3,897,573 - +0.4 3,897,573 - +0.8 3,897,581 + +0.6 3,897,581 + +0.7 3,897,581 + +0.2 3,897,582 - +0.4 3,897,582 - +0.1 3,897,582 - -0.0 3,897,582 - +0.2 3,897,635 + +0.4 3,897,636 - +0.6 3,897,650 + +0.2 3,897,669 + -0.4 3,897,670 - +0.4 3,897,670 - -0.1 3,897,670 - +0.3 3,897,673 + +0.2 3,897,674 - +0.6 3,897,674 - -0.7 3,897,674 - +0.5 3,897,772 + -0.0 3,897,773 - -0.3 3,897,773 - +0.2 3,897,789 + +1.3 3,897,789 + +0.6 3,897,789 + -1.1 3,897,790 - -0.3 3,897,790 - +0.7 3,897,790 - +0.8 3,897,791 + -0.0 3,897,791 + +0.2 3,897,791 + -0.0 3,897,791 + +0.8 3,897,791 + +0.8 3,897,791 + -0.0 3,897,791 + +0.5 3,897,792 - -0.1 3,897,792 - -0.7 3,897,792 - +0.7 3,897,847 + ECD_03700 0.13 +0.2 3,897,848 - ECD_03700 0.13 +0.6 3,897,848 - ECD_03700 0.13 +0.2 3,897,859 + ECD_03700 0.14 +0.8 3,897,859 + ECD_03700 0.14 +0.1 3,897,860 - ECD_03700 0.14 +0.8 3,897,860 - ECD_03700 0.14 +1.7 3,897,894 - ECD_03700 0.18 -0.4 3,897,899 + ECD_03700 0.19 +0.6 3,897,899 + ECD_03700 0.19 -0.0 3,897,911 + ECD_03700 0.20 -0.8 3,897,911 + ECD_03700 0.20 +0.2 3,897,911 + ECD_03700 0.20 +1.7 3,897,911 + ECD_03700 0.20 +1.1 3,897,911 + ECD_03700 0.20 +0.3 3,897,912 - ECD_03700 0.20 +0.5 3,897,912 - ECD_03700 0.20 +0.2 3,897,912 - ECD_03700 0.20 +0.3 3,897,920 + ECD_03700 0.21 +0.2 3,897,921 - ECD_03700 0.21 +0.7 3,897,921 - ECD_03700 0.21 -0.3 3,897,921 - ECD_03700 0.21 +0.4 3,897,921 - ECD_03700 0.21 -0.1 3,897,921 - ECD_03700 0.21 -0.1 3,897,921 - ECD_03700 0.21 +0.4 3,898,042 - ECD_03700 0.35 +0.5 3,898,072 + ECD_03700 0.39 +0.4 3,898,099 + ECD_03700 0.42 -0.4 3,898,100 - ECD_03700 0.42 -0.1 3,898,102 + ECD_03700 0.42 +0.2 3,898,102 + ECD_03700 0.42 -0.7 3,898,136 + ECD_03700 0.46 +0.6 3,898,136 + ECD_03700 0.46 -0.6 3,898,137 - ECD_03700 0.46 +0.3 3,898,172 + ECD_03700 0.50 -1.2 3,898,271 + ECD_03700 0.61 +0.2 3,898,272 - ECD_03700 0.61 +0.1 3,898,272 - ECD_03700 0.61 +0.4 3,898,325 + ECD_03700 0.68 +0.5 3,898,326 - ECD_03700 0.68 +0.5 3,898,326 - ECD_03700 0.68 +1.1 3,898,326 - ECD_03700 0.68 +0.5 3,898,326 - ECD_03700 0.68 +0.1 3,898,326 - ECD_03700 0.68 +0.1 3,898,326 - ECD_03700 0.68 +0.3 3,898,367 + ECD_03700 0.72 +0.3 3,898,367 + ECD_03700 0.72 +1.5 3,898,367 + ECD_03700 0.72 +0.8 3,898,367 + ECD_03700 0.72 +0.5 3,898,367 + ECD_03700 0.72 +0.4 3,898,367 + ECD_03700 0.72 +0.3 3,898,367 + ECD_03700 0.72 +0.3 3,898,368 - ECD_03700 0.73 +1.0 3,898,368 - ECD_03700 0.73 +0.3 3,898,368 - ECD_03700 0.73 +0.7 3,898,368 - ECD_03700 0.73 -0.1 3,898,368 - ECD_03700 0.73 +0.0 3,898,376 + ECD_03700 0.73 -0.1 3,898,377 - ECD_03700 0.74 -0.0 3,898,398 - ECD_03700 0.76 -0.3 3,898,437 - ECD_03700 0.80 +0.8 3,898,471 - ECD_03700 0.84 +1.0 3,898,476 + ECD_03700 0.85 -0.3 3,898,476 + ECD_03700 0.85 +0.3 3,898,476 + ECD_03700 0.85 +0.1 3,898,476 + ECD_03700 0.85 +0.7 3,898,476 + ECD_03700 0.85 +0.2 3,898,477 - ECD_03700 0.85 +0.7 3,898,477 - ECD_03700 0.85 +0.3 3,898,477 - ECD_03700 0.85 +0.8 3,898,508 + ECD_03700 0.89 +0.1 3,898,509 - ECD_03700 0.89 +1.1 3,898,510 + ECD_03700 0.89 -0.7 3,898,550 + -0.5 3,898,550 + +2.3 3,898,552 + +0.7 3,898,552 + +0.0 3,898,553 - +0.1 3,898,553 - +0.8 3,898,553 - +0.7 3,898,585 + -0.5 3,898,586 - +0.5 3,898,586 - -0.4 3,898,586 - +0.5 3,898,586 - +0.9 3,898,586 - +0.7 3,898,586 - -0.1 3,898,586 - -0.4 3,898,695 + +0.5 3,899,051 + ECD_03701 0.18 +0.2 3,899,088 + ECD_03701 0.20 +0.3 3,899,089 - ECD_03701 0.20 -0.1 3,899,089 - ECD_03701 0.20 +0.4 3,899,089 - ECD_03701 0.20 +0.3 3,899,117 + ECD_03701 0.21 -0.5 3,899,180 + ECD_03701 0.25 +0.7 3,899,180 + ECD_03701 0.25 -0.7 3,899,180 + ECD_03701 0.25 -0.1 3,899,180 + ECD_03701 0.25 -0.8 3,899,181 - ECD_03701 0.25 +1.3 3,899,181 - ECD_03701 0.25 +0.4 3,899,181 - ECD_03701 0.25 -0.5 3,899,181 - ECD_03701 0.25 -1.7 3,899,373 + ECD_03701 0.35 +0.2 3,899,374 - ECD_03701 0.35 -0.2 3,899,439 - ECD_03701 0.39 -0.5 3,899,451 - ECD_03701 0.40 -0.3 3,899,451 - ECD_03701 0.40 -0.1 3,899,451 - ECD_03701 0.40 -0.2 3,899,451 - ECD_03701 0.40 +0.2 3,899,451 - ECD_03701 0.40 -0.8 3,899,454 + ECD_03701 0.40 +0.3 3,899,476 + ECD_03701 0.41 -1.0 3,899,526 + ECD_03701 0.44 -1.4 3,899,546 + ECD_03701 0.45 -0.1 3,899,546 + ECD_03701 0.45 +0.5
Or see this region's nucleotide sequence