Strain Fitness in Escherichia coli BL21 around ECD_03282

Experiment: Laval1261

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03281 and ECD_03282 overlap by 1 nucleotidesECD_03282 and ECD_03283 are separated by 17 nucleotides ECD_03281: ECD_03281 - glycogen synthase, at 3,429,750 to 3,431,183 _03281 ECD_03282: ECD_03282 - glucose-1-phosphate adenylyltransferase, at 3,431,183 to 3,432,478 _03282 ECD_03283: ECD_03283 - glycogen debranching enzyme, at 3,432,496 to 3,434,469 _03283 Position (kb) 3431 3432 3433Strain fitness (log2 ratio) -3 -2 -1 0 1at 3430.313 kb on + strand, within ECD_03281at 3430.325 kb on + strand, within ECD_03281at 3430.326 kb on - strand, within ECD_03281at 3430.326 kb on - strand, within ECD_03281at 3430.345 kb on - strand, within ECD_03281at 3430.407 kb on + strand, within ECD_03281at 3430.407 kb on + strand, within ECD_03281at 3430.408 kb on - strand, within ECD_03281at 3430.503 kb on - strand, within ECD_03281at 3430.508 kb on - strand, within ECD_03281at 3430.540 kb on + strand, within ECD_03281at 3430.540 kb on + strand, within ECD_03281at 3430.541 kb on - strand, within ECD_03281at 3430.560 kb on - strand, within ECD_03281at 3430.574 kb on - strand, within ECD_03281at 3430.574 kb on - strand, within ECD_03281at 3430.576 kb on + strand, within ECD_03281at 3430.675 kb on + strand, within ECD_03281at 3430.676 kb on - strand, within ECD_03281at 3430.690 kb on + strand, within ECD_03281at 3430.863 kb on + strand, within ECD_03281at 3430.863 kb on + strand, within ECD_03281at 3430.876 kb on + strand, within ECD_03281at 3430.877 kb on - strand, within ECD_03281at 3430.884 kb on + strand, within ECD_03281at 3430.884 kb on + strand, within ECD_03281at 3430.885 kb on - strand, within ECD_03281at 3430.885 kb on - strand, within ECD_03281at 3430.885 kb on - strand, within ECD_03281at 3430.885 kb on - strand, within ECD_03281at 3430.921 kb on + strand, within ECD_03281at 3430.921 kb on + strand, within ECD_03281at 3430.922 kb on - strand, within ECD_03281at 3430.946 kb on - strand, within ECD_03281at 3430.946 kb on - strand, within ECD_03281at 3430.948 kb on - strand, within ECD_03281at 3430.948 kb on - strand, within ECD_03281at 3430.948 kb on - strand, within ECD_03281at 3430.948 kb on - strand, within ECD_03281at 3430.948 kb on - strand, within ECD_03281at 3430.964 kb on - strand, within ECD_03281at 3430.964 kb on - strand, within ECD_03281at 3430.985 kb on + strand, within ECD_03281at 3430.985 kb on + strand, within ECD_03281at 3430.985 kb on + strand, within ECD_03281at 3430.985 kb on + strand, within ECD_03281at 3430.986 kb on - strand, within ECD_03281at 3430.986 kb on - strand, within ECD_03281at 3430.986 kb on - strand, within ECD_03281at 3430.986 kb on - strand, within ECD_03281at 3431.013 kb on + strand, within ECD_03281at 3431.014 kb on - strand, within ECD_03281at 3431.016 kb on + strand, within ECD_03281at 3431.017 kb on - strand, within ECD_03281at 3431.017 kb on - strand, within ECD_03281at 3431.067 kb on + strandat 3431.166 kb on + strandat 3431.172 kb on + strandat 3431.172 kb on + strandat 3431.360 kb on + strand, within ECD_03282at 3431.361 kb on - strand, within ECD_03282at 3431.361 kb on - strand, within ECD_03282at 3431.361 kb on - strand, within ECD_03282at 3431.366 kb on + strand, within ECD_03282at 3431.366 kb on + strand, within ECD_03282at 3431.367 kb on - strand, within ECD_03282at 3431.381 kb on + strand, within ECD_03282at 3431.489 kb on - strand, within ECD_03282at 3431.489 kb on - strand, within ECD_03282at 3431.553 kb on + strand, within ECD_03282at 3431.554 kb on - strand, within ECD_03282at 3431.554 kb on - strand, within ECD_03282at 3431.580 kb on + strand, within ECD_03282at 3431.580 kb on + strand, within ECD_03282at 3431.581 kb on - strand, within ECD_03282at 3431.584 kb on + strand, within ECD_03282at 3431.584 kb on + strand, within ECD_03282at 3431.585 kb on - strand, within ECD_03282at 3431.715 kb on + strand, within ECD_03282at 3431.809 kb on - strand, within ECD_03282at 3431.809 kb on - strand, within ECD_03282at 3431.809 kb on - strand, within ECD_03282at 3431.832 kb on + strand, within ECD_03282at 3431.833 kb on - strand, within ECD_03282at 3431.833 kb on - strand, within ECD_03282at 3431.833 kb on - strand, within ECD_03282at 3431.833 kb on - strand, within ECD_03282at 3431.836 kb on + strand, within ECD_03282at 3431.843 kb on - strand, within ECD_03282at 3431.939 kb on - strand, within ECD_03282at 3431.977 kb on + strand, within ECD_03282at 3431.977 kb on + strand, within ECD_03282at 3431.977 kb on + strand, within ECD_03282at 3431.978 kb on - strand, within ECD_03282at 3432.026 kb on - strand, within ECD_03282at 3432.034 kb on - strand, within ECD_03282at 3432.045 kb on + strand, within ECD_03282at 3432.046 kb on - strand, within ECD_03282at 3432.046 kb on - strand, within ECD_03282at 3432.046 kb on - strand, within ECD_03282at 3432.046 kb on - strand, within ECD_03282at 3432.046 kb on - strand, within ECD_03282at 3432.046 kb on - strand, within ECD_03282at 3432.049 kb on + strand, within ECD_03282at 3432.050 kb on - strand, within ECD_03282at 3432.050 kb on - strand, within ECD_03282at 3432.050 kb on - strand, within ECD_03282at 3432.050 kb on - strand, within ECD_03282at 3432.085 kb on + strand, within ECD_03282at 3432.085 kb on + strand, within ECD_03282at 3432.086 kb on - strand, within ECD_03282at 3432.088 kb on - strand, within ECD_03282at 3432.088 kb on - strand, within ECD_03282at 3432.206 kb on - strand, within ECD_03282at 3432.301 kb on + strand, within ECD_03282at 3432.301 kb on + strand, within ECD_03282at 3432.449 kb on + strandat 3432.450 kb on - strandat 3432.450 kb on - strandat 3432.450 kb on - strandat 3432.450 kb on - strandat 3432.473 kb on - strandat 3432.482 kb on + strandat 3432.482 kb on + strandat 3432.483 kb on - strandat 3432.483 kb on - strandat 3432.483 kb on - strandat 3432.604 kb on + strandat 3432.710 kb on - strand, within ECD_03283at 3432.789 kb on + strand, within ECD_03283at 3432.790 kb on - strand, within ECD_03283at 3432.808 kb on + strand, within ECD_03283at 3432.865 kb on + strand, within ECD_03283at 3432.884 kb on + strand, within ECD_03283at 3432.935 kb on - strand, within ECD_03283at 3433.018 kb on - strand, within ECD_03283at 3433.035 kb on + strand, within ECD_03283at 3433.035 kb on + strand, within ECD_03283at 3433.036 kb on - strand, within ECD_03283at 3433.036 kb on - strand, within ECD_03283at 3433.047 kb on + strand, within ECD_03283at 3433.104 kb on + strand, within ECD_03283at 3433.188 kb on + strand, within ECD_03283at 3433.189 kb on - strand, within ECD_03283at 3433.250 kb on + strand, within ECD_03283at 3433.250 kb on + strand, within ECD_03283at 3433.250 kb on + strand, within ECD_03283at 3433.251 kb on - strand, within ECD_03283at 3433.251 kb on - strand, within ECD_03283at 3433.251 kb on - strand, within ECD_03283at 3433.331 kb on + strand, within ECD_03283at 3433.367 kb on - strand, within ECD_03283

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1261
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3,430,313 + ECD_03281 0.39 -0.0
3,430,325 + ECD_03281 0.40 -1.3
3,430,326 - ECD_03281 0.40 -0.3
3,430,326 - ECD_03281 0.40 -1.1
3,430,345 - ECD_03281 0.41 -0.6
3,430,407 + ECD_03281 0.46 +0.7
3,430,407 + ECD_03281 0.46 -0.2
3,430,408 - ECD_03281 0.46 +1.1
3,430,503 - ECD_03281 0.53 +0.8
3,430,508 - ECD_03281 0.53 -0.2
3,430,540 + ECD_03281 0.55 +0.0
3,430,540 + ECD_03281 0.55 -0.1
3,430,541 - ECD_03281 0.55 -0.4
3,430,560 - ECD_03281 0.56 -1.0
3,430,574 - ECD_03281 0.57 -1.8
3,430,574 - ECD_03281 0.57 +0.2
3,430,576 + ECD_03281 0.58 +0.6
3,430,675 + ECD_03281 0.65 -0.4
3,430,676 - ECD_03281 0.65 -0.1
3,430,690 + ECD_03281 0.66 +1.0
3,430,863 + ECD_03281 0.78 -1.9
3,430,863 + ECD_03281 0.78 +0.0
3,430,876 + ECD_03281 0.79 +0.0
3,430,877 - ECD_03281 0.79 +0.1
3,430,884 + ECD_03281 0.79 -0.8
3,430,884 + ECD_03281 0.79 +0.4
3,430,885 - ECD_03281 0.79 -0.0
3,430,885 - ECD_03281 0.79 -0.9
3,430,885 - ECD_03281 0.79 -0.2
3,430,885 - ECD_03281 0.79 -1.5
3,430,921 + ECD_03281 0.82 +0.2
3,430,921 + ECD_03281 0.82 +0.2
3,430,922 - ECD_03281 0.82 -0.7
3,430,946 - ECD_03281 0.83 +0.2
3,430,946 - ECD_03281 0.83 -0.9
3,430,948 - ECD_03281 0.84 +0.7
3,430,948 - ECD_03281 0.84 +0.0
3,430,948 - ECD_03281 0.84 -0.0
3,430,948 - ECD_03281 0.84 -0.1
3,430,948 - ECD_03281 0.84 +0.7
3,430,964 - ECD_03281 0.85 +0.4
3,430,964 - ECD_03281 0.85 -0.1
3,430,985 + ECD_03281 0.86 +0.1
3,430,985 + ECD_03281 0.86 -0.6
3,430,985 + ECD_03281 0.86 +0.3
3,430,985 + ECD_03281 0.86 -0.0
3,430,986 - ECD_03281 0.86 +0.1
3,430,986 - ECD_03281 0.86 -0.4
3,430,986 - ECD_03281 0.86 -0.2
3,430,986 - ECD_03281 0.86 -0.3
3,431,013 + ECD_03281 0.88 -0.7
3,431,014 - ECD_03281 0.88 +0.1
3,431,016 + ECD_03281 0.88 +0.1
3,431,017 - ECD_03281 0.88 +0.0
3,431,017 - ECD_03281 0.88 +0.1
3,431,067 + +0.1
3,431,166 + +0.2
3,431,172 + -0.7
3,431,172 + +0.4
3,431,360 + ECD_03282 0.14 -0.1
3,431,361 - ECD_03282 0.14 +1.0
3,431,361 - ECD_03282 0.14 +0.0
3,431,361 - ECD_03282 0.14 -1.0
3,431,366 + ECD_03282 0.14 +0.1
3,431,366 + ECD_03282 0.14 -0.4
3,431,367 - ECD_03282 0.14 +0.1
3,431,381 + ECD_03282 0.15 +0.1
3,431,489 - ECD_03282 0.24 +0.3
3,431,489 - ECD_03282 0.24 -0.9
3,431,553 + ECD_03282 0.29 -0.3
3,431,554 - ECD_03282 0.29 -0.4
3,431,554 - ECD_03282 0.29 -0.4
3,431,580 + ECD_03282 0.31 -0.4
3,431,580 + ECD_03282 0.31 -0.8
3,431,581 - ECD_03282 0.31 -0.8
3,431,584 + ECD_03282 0.31 -0.0
3,431,584 + ECD_03282 0.31 +0.2
3,431,585 - ECD_03282 0.31 -0.1
3,431,715 + ECD_03282 0.41 -0.5
3,431,809 - ECD_03282 0.48 -0.5
3,431,809 - ECD_03282 0.48 -0.6
3,431,809 - ECD_03282 0.48 -0.1
3,431,832 + ECD_03282 0.50 +0.2
3,431,833 - ECD_03282 0.50 -0.7
3,431,833 - ECD_03282 0.50 -0.9
3,431,833 - ECD_03282 0.50 -0.4
3,431,833 - ECD_03282 0.50 -0.2
3,431,836 + ECD_03282 0.50 +0.6
3,431,843 - ECD_03282 0.51 -0.2
3,431,939 - ECD_03282 0.58 +0.2
3,431,977 + ECD_03282 0.61 -0.6
3,431,977 + ECD_03282 0.61 -0.6
3,431,977 + ECD_03282 0.61 -0.2
3,431,978 - ECD_03282 0.61 -0.9
3,432,026 - ECD_03282 0.65 -0.4
3,432,034 - ECD_03282 0.66 +0.5
3,432,045 + ECD_03282 0.67 +0.7
3,432,046 - ECD_03282 0.67 +0.5
3,432,046 - ECD_03282 0.67 -0.7
3,432,046 - ECD_03282 0.67 -1.5
3,432,046 - ECD_03282 0.67 -1.0
3,432,046 - ECD_03282 0.67 -0.8
3,432,046 - ECD_03282 0.67 -0.6
3,432,049 + ECD_03282 0.67 +0.2
3,432,050 - ECD_03282 0.67 +1.4
3,432,050 - ECD_03282 0.67 +0.4
3,432,050 - ECD_03282 0.67 +0.1
3,432,050 - ECD_03282 0.67 -1.0
3,432,085 + ECD_03282 0.70 +0.4
3,432,085 + ECD_03282 0.70 +0.4
3,432,086 - ECD_03282 0.70 +0.5
3,432,088 - ECD_03282 0.70 -1.0
3,432,088 - ECD_03282 0.70 +0.4
3,432,206 - ECD_03282 0.79 -0.6
3,432,301 + ECD_03282 0.86 -0.4
3,432,301 + ECD_03282 0.86 -0.1
3,432,449 + -0.0
3,432,450 - -0.3
3,432,450 - -0.6
3,432,450 - +0.1
3,432,450 - +0.4
3,432,473 - -0.4
3,432,482 + -0.2
3,432,482 + -1.0
3,432,483 - -0.0
3,432,483 - -0.1
3,432,483 - +1.0
3,432,604 + +0.7
3,432,710 - ECD_03283 0.11 +0.3
3,432,789 + ECD_03283 0.15 +0.5
3,432,790 - ECD_03283 0.15 -1.0
3,432,808 + ECD_03283 0.16 +0.1
3,432,865 + ECD_03283 0.19 +0.1
3,432,884 + ECD_03283 0.20 +0.3
3,432,935 - ECD_03283 0.22 +0.7
3,433,018 - ECD_03283 0.26 +0.1
3,433,035 + ECD_03283 0.27 -0.4
3,433,035 + ECD_03283 0.27 +0.2
3,433,036 - ECD_03283 0.27 +0.5
3,433,036 - ECD_03283 0.27 -0.1
3,433,047 + ECD_03283 0.28 -3.1
3,433,104 + ECD_03283 0.31 +1.4
3,433,188 + ECD_03283 0.35 -0.6
3,433,189 - ECD_03283 0.35 -0.0
3,433,250 + ECD_03283 0.38 +0.4
3,433,250 + ECD_03283 0.38 +0.0
3,433,250 + ECD_03283 0.38 -1.1
3,433,251 - ECD_03283 0.38 +0.1
3,433,251 - ECD_03283 0.38 -0.5
3,433,251 - ECD_03283 0.38 -1.0
3,433,331 + ECD_03283 0.42 -0.6
3,433,367 - ECD_03283 0.44 +0.2

Or see this region's nucleotide sequence