Strain Fitness in Escherichia coli BL21 around ECD_03115

Experiment: Laval1261

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03114 and ECD_03115 are separated by 108 nucleotidesECD_03115 and ECD_03116 overlap by 11 nucleotides ECD_03114: ECD_03114 - acetyl-CoA carboxylase, biotin carboxylase subunit, at 3,267,073 to 3,268,422 _03114 ECD_03115: ECD_03115 - DUF997 family putative inner membrane protein, at 3,268,531 to 3,268,773 _03115 ECD_03116: ECD_03116 - pantothenate:sodium symporter, at 3,268,763 to 3,270,214 _03116 Position (kb) 3268 3269Strain fitness (log2 ratio) -3 -2 -1 0 1at 3268.420 kb on + strandat 3268.429 kb on + strandat 3268.465 kb on - strandat 3268.494 kb on + strandat 3268.494 kb on + strandat 3268.494 kb on + strandat 3268.494 kb on + strandat 3268.494 kb on + strandat 3268.495 kb on - strandat 3268.495 kb on - strandat 3268.594 kb on + strand, within ECD_03115at 3268.621 kb on + strand, within ECD_03115at 3268.621 kb on + strand, within ECD_03115at 3268.647 kb on + strand, within ECD_03115at 3268.701 kb on + strand, within ECD_03115at 3268.701 kb on + strand, within ECD_03115at 3268.776 kb on + strandat 3268.782 kb on + strandat 3268.796 kb on + strandat 3268.826 kb on + strandat 3268.868 kb on + strandat 3268.868 kb on + strandat 3268.869 kb on - strandat 3268.928 kb on + strand, within ECD_03116at 3268.928 kb on + strand, within ECD_03116at 3268.928 kb on + strand, within ECD_03116at 3268.928 kb on + strand, within ECD_03116at 3268.929 kb on - strand, within ECD_03116at 3268.929 kb on - strand, within ECD_03116at 3268.929 kb on - strand, within ECD_03116at 3268.930 kb on + strand, within ECD_03116at 3268.930 kb on + strand, within ECD_03116at 3268.972 kb on + strand, within ECD_03116at 3268.972 kb on + strand, within ECD_03116at 3268.972 kb on + strand, within ECD_03116at 3268.972 kb on + strand, within ECD_03116at 3268.973 kb on - strand, within ECD_03116at 3268.973 kb on - strand, within ECD_03116at 3269.075 kb on + strand, within ECD_03116at 3269.098 kb on + strand, within ECD_03116at 3269.099 kb on - strand, within ECD_03116at 3269.274 kb on + strand, within ECD_03116at 3269.274 kb on + strand, within ECD_03116at 3269.276 kb on + strand, within ECD_03116at 3269.276 kb on + strand, within ECD_03116at 3269.276 kb on + strand, within ECD_03116at 3269.276 kb on + strand, within ECD_03116at 3269.276 kb on + strand, within ECD_03116at 3269.276 kb on + strand, within ECD_03116at 3269.278 kb on + strand, within ECD_03116at 3269.278 kb on + strand, within ECD_03116at 3269.363 kb on - strand, within ECD_03116at 3269.371 kb on - strand, within ECD_03116at 3269.373 kb on + strand, within ECD_03116at 3269.373 kb on + strand, within ECD_03116at 3269.374 kb on - strand, within ECD_03116at 3269.403 kb on + strand, within ECD_03116at 3269.458 kb on + strand, within ECD_03116at 3269.459 kb on - strand, within ECD_03116at 3269.476 kb on + strand, within ECD_03116at 3269.477 kb on - strand, within ECD_03116at 3269.549 kb on + strand, within ECD_03116at 3269.549 kb on + strand, within ECD_03116at 3269.641 kb on - strand, within ECD_03116at 3269.771 kb on - strand, within ECD_03116

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1261
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3,268,420 + -1.1
3,268,429 + +0.9
3,268,465 - -0.2
3,268,494 + +1.3
3,268,494 + -0.3
3,268,494 + -0.3
3,268,494 + -0.9
3,268,494 + +0.1
3,268,495 - -0.3
3,268,495 - -0.4
3,268,594 + ECD_03115 0.26 +0.6
3,268,621 + ECD_03115 0.37 -0.6
3,268,621 + ECD_03115 0.37 -0.5
3,268,647 + ECD_03115 0.48 +0.6
3,268,701 + ECD_03115 0.70 -0.5
3,268,701 + ECD_03115 0.70 +0.1
3,268,776 + +0.4
3,268,782 + +0.2
3,268,796 + +0.0
3,268,826 + -1.1
3,268,868 + +0.4
3,268,868 + -0.1
3,268,869 - -0.7
3,268,928 + ECD_03116 0.11 -0.5
3,268,928 + ECD_03116 0.11 +0.3
3,268,928 + ECD_03116 0.11 +1.7
3,268,928 + ECD_03116 0.11 +0.3
3,268,929 - ECD_03116 0.11 -0.5
3,268,929 - ECD_03116 0.11 -0.4
3,268,929 - ECD_03116 0.11 -0.2
3,268,930 + ECD_03116 0.12 +0.9
3,268,930 + ECD_03116 0.12 +0.5
3,268,972 + ECD_03116 0.14 -0.1
3,268,972 + ECD_03116 0.14 +0.4
3,268,972 + ECD_03116 0.14 +0.1
3,268,972 + ECD_03116 0.14 -2.8
3,268,973 - ECD_03116 0.14 -0.1
3,268,973 - ECD_03116 0.14 +0.7
3,269,075 + ECD_03116 0.21 +0.6
3,269,098 + ECD_03116 0.23 +0.1
3,269,099 - ECD_03116 0.23 -0.4
3,269,274 + ECD_03116 0.35 +0.7
3,269,274 + ECD_03116 0.35 +0.0
3,269,276 + ECD_03116 0.35 +0.4
3,269,276 + ECD_03116 0.35 +0.7
3,269,276 + ECD_03116 0.35 +0.3
3,269,276 + ECD_03116 0.35 -0.6
3,269,276 + ECD_03116 0.35 +1.1
3,269,276 + ECD_03116 0.35 -0.3
3,269,278 + ECD_03116 0.35 -0.6
3,269,278 + ECD_03116 0.35 -1.8
3,269,363 - ECD_03116 0.41 +0.2
3,269,371 - ECD_03116 0.42 -0.8
3,269,373 + ECD_03116 0.42 -0.6
3,269,373 + ECD_03116 0.42 +0.7
3,269,374 - ECD_03116 0.42 -0.2
3,269,403 + ECD_03116 0.44 -0.4
3,269,458 + ECD_03116 0.48 -0.7
3,269,459 - ECD_03116 0.48 +0.1
3,269,476 + ECD_03116 0.49 +0.1
3,269,477 - ECD_03116 0.49 +0.2
3,269,549 + ECD_03116 0.54 -0.1
3,269,549 + ECD_03116 0.54 -0.2
3,269,641 - ECD_03116 0.60 +1.3
3,269,771 - ECD_03116 0.69 -0.3

Or see this region's nucleotide sequence