Strain Fitness in Escherichia coli BL21 around ECD_02743

Experiment: Laval1261

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02741 and ECD_02742 are separated by 167 nucleotidesECD_02742 and ECD_02743 are separated by 299 nucleotidesECD_02743 and ECD_02744 are separated by 388 nucleotides ECD_02741: ECD_02741 - UPF0149 family protein, at 2,885,724 to 2,886,302 _02741 ECD_02742: ECD_02742 - FtsZ stabilizer, at 2,886,470 to 2,886,799 _02742 ECD_02743: ECD_02743 - 5-formyltetrahydrofolate cyclo-ligase family protein, at 2,887,099 to 2,887,647 _02743 ECD_02744: ECD_02744 - D-3-phosphoglycerate dehydrogenase, at 2,888,036 to 2,889,268 _02744 Position (kb) 2887 2888Strain fitness (log2 ratio) -2 -1 0 1 2at 2886.156 kb on + strand, within ECD_02741at 2886.156 kb on + strand, within ECD_02741at 2886.157 kb on - strand, within ECD_02741at 2886.192 kb on + strand, within ECD_02741at 2886.193 kb on - strand, within ECD_02741at 2886.193 kb on - strand, within ECD_02741at 2886.193 kb on - strand, within ECD_02741at 2886.193 kb on - strand, within ECD_02741at 2886.193 kb on - strand, within ECD_02741at 2886.193 kb on - strand, within ECD_02741at 2886.193 kb on - strand, within ECD_02741at 2886.193 kb on - strand, within ECD_02741at 2886.193 kb on - strand, within ECD_02741at 2886.194 kb on - strand, within ECD_02741at 2886.208 kb on - strand, within ECD_02741at 2886.208 kb on - strand, within ECD_02741at 2886.208 kb on - strand, within ECD_02741at 2886.275 kb on - strandat 2886.295 kb on - strandat 2886.295 kb on - strandat 2886.295 kb on - strandat 2886.296 kb on + strandat 2886.297 kb on - strandat 2886.297 kb on - strandat 2886.297 kb on - strandat 2886.297 kb on - strandat 2886.297 kb on - strandat 2886.297 kb on - strandat 2886.297 kb on - strandat 2886.302 kb on + strandat 2886.302 kb on + strandat 2886.302 kb on + strandat 2886.302 kb on + strandat 2886.302 kb on + strandat 2886.302 kb on + strandat 2886.302 kb on + strandat 2886.303 kb on - strandat 2886.303 kb on - strandat 2886.303 kb on - strandat 2886.303 kb on - strandat 2886.303 kb on - strandat 2886.303 kb on - strandat 2886.303 kb on - strandat 2886.329 kb on - strandat 2886.329 kb on - strandat 2886.329 kb on - strandat 2886.329 kb on - strandat 2886.329 kb on - strandat 2886.337 kb on + strandat 2886.338 kb on - strandat 2886.338 kb on - strandat 2886.338 kb on - strandat 2886.342 kb on + strandat 2886.399 kb on + strandat 2886.399 kb on + strandat 2886.399 kb on + strandat 2886.399 kb on + strandat 2886.399 kb on + strandat 2886.399 kb on + strandat 2886.399 kb on + strandat 2886.399 kb on + strandat 2886.400 kb on - strandat 2886.604 kb on + strand, within ECD_02742at 2886.604 kb on + strand, within ECD_02742at 2886.616 kb on + strand, within ECD_02742at 2886.656 kb on + strand, within ECD_02742at 2886.657 kb on - strand, within ECD_02742at 2886.738 kb on + strand, within ECD_02742at 2886.738 kb on + strand, within ECD_02742at 2886.738 kb on + strand, within ECD_02742at 2886.738 kb on + strand, within ECD_02742at 2886.738 kb on + strand, within ECD_02742at 2886.738 kb on + strand, within ECD_02742at 2886.738 kb on + strand, within ECD_02742at 2886.750 kb on + strand, within ECD_02742at 2886.750 kb on + strand, within ECD_02742at 2886.781 kb on + strandat 2886.812 kb on + strandat 2886.820 kb on + strandat 2886.820 kb on + strandat 2886.820 kb on + strandat 2886.820 kb on + strandat 2886.820 kb on + strandat 2886.820 kb on + strandat 2886.891 kb on + strandat 2887.030 kb on + strandat 2887.030 kb on + strandat 2887.030 kb on + strandat 2887.030 kb on + strandat 2887.055 kb on + strandat 2887.256 kb on + strand, within ECD_02743at 2887.256 kb on + strand, within ECD_02743at 2887.256 kb on + strand, within ECD_02743at 2887.256 kb on + strand, within ECD_02743at 2887.286 kb on + strand, within ECD_02743at 2887.288 kb on + strand, within ECD_02743at 2887.288 kb on + strand, within ECD_02743at 2887.465 kb on + strand, within ECD_02743at 2887.498 kb on + strand, within ECD_02743at 2887.511 kb on + strand, within ECD_02743at 2887.529 kb on - strand, within ECD_02743at 2887.620 kb on + strandat 2887.696 kb on + strandat 2887.696 kb on + strandat 2887.697 kb on - strandat 2887.708 kb on + strandat 2887.749 kb on + strandat 2887.749 kb on + strandat 2887.752 kb on + strandat 2887.753 kb on - strandat 2887.753 kb on - strandat 2887.753 kb on - strandat 2887.766 kb on + strandat 2887.772 kb on + strandat 2887.772 kb on + strandat 2887.772 kb on + strandat 2887.772 kb on + strandat 2887.772 kb on + strandat 2887.778 kb on + strandat 2887.778 kb on + strandat 2887.778 kb on + strandat 2887.778 kb on + strandat 2887.778 kb on + strandat 2887.779 kb on - strandat 2887.779 kb on - strandat 2887.787 kb on + strandat 2887.787 kb on + strandat 2887.787 kb on + strandat 2887.787 kb on + strandat 2887.807 kb on + strandat 2887.879 kb on - strandat 2888.038 kb on - strandat 2888.040 kb on + strandat 2888.041 kb on - strandat 2888.041 kb on - strandat 2888.072 kb on - strandat 2888.136 kb on + strandat 2888.136 kb on + strandat 2888.137 kb on - strandat 2888.137 kb on - strandat 2888.137 kb on - strandat 2888.137 kb on - strandat 2888.137 kb on - strandat 2888.216 kb on + strand, within ECD_02744at 2888.325 kb on + strand, within ECD_02744at 2888.326 kb on - strand, within ECD_02744at 2888.326 kb on - strand, within ECD_02744at 2888.326 kb on - strand, within ECD_02744at 2888.437 kb on + strand, within ECD_02744at 2888.438 kb on - strand, within ECD_02744at 2888.438 kb on - strand, within ECD_02744at 2888.438 kb on - strand, within ECD_02744at 2888.475 kb on - strand, within ECD_02744at 2888.560 kb on + strand, within ECD_02744at 2888.561 kb on - strand, within ECD_02744at 2888.612 kb on - strand, within ECD_02744at 2888.612 kb on - strand, within ECD_02744at 2888.612 kb on - strand, within ECD_02744at 2888.637 kb on - strand, within ECD_02744at 2888.637 kb on - strand, within ECD_02744at 2888.637 kb on - strand, within ECD_02744

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1261
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2,886,156 + ECD_02741 0.75 -2.0
2,886,156 + ECD_02741 0.75 -1.2
2,886,157 - ECD_02741 0.75 -1.1
2,886,192 + ECD_02741 0.81 -1.1
2,886,193 - ECD_02741 0.81 -0.3
2,886,193 - ECD_02741 0.81 -2.4
2,886,193 - ECD_02741 0.81 +0.7
2,886,193 - ECD_02741 0.81 +0.3
2,886,193 - ECD_02741 0.81 +0.8
2,886,193 - ECD_02741 0.81 +1.0
2,886,193 - ECD_02741 0.81 +1.2
2,886,193 - ECD_02741 0.81 +0.6
2,886,193 - ECD_02741 0.81 -1.2
2,886,194 - ECD_02741 0.81 +0.6
2,886,208 - ECD_02741 0.84 -0.7
2,886,208 - ECD_02741 0.84 +0.4
2,886,208 - ECD_02741 0.84 -0.0
2,886,275 - -0.8
2,886,295 - -0.1
2,886,295 - -0.9
2,886,295 - -0.0
2,886,296 + -0.6
2,886,297 - -0.3
2,886,297 - -0.0
2,886,297 - -1.1
2,886,297 - -0.1
2,886,297 - -0.1
2,886,297 - -1.6
2,886,297 - -0.7
2,886,302 + -1.2
2,886,302 + +1.2
2,886,302 + -1.7
2,886,302 + -1.1
2,886,302 + +0.3
2,886,302 + -1.3
2,886,302 + -0.4
2,886,303 - -0.2
2,886,303 - +0.3
2,886,303 - +0.7
2,886,303 - +0.8
2,886,303 - -0.1
2,886,303 - -0.6
2,886,303 - -0.2
2,886,329 - +0.1
2,886,329 - -0.0
2,886,329 - -1.6
2,886,329 - -0.6
2,886,329 - +0.3
2,886,337 + -1.8
2,886,338 - -0.2
2,886,338 - -0.1
2,886,338 - +0.2
2,886,342 + -1.7
2,886,399 + -1.1
2,886,399 + -1.4
2,886,399 + -1.1
2,886,399 + -0.7
2,886,399 + -0.7
2,886,399 + -1.6
2,886,399 + -0.8
2,886,399 + -1.3
2,886,400 - -1.5
2,886,604 + ECD_02742 0.41 -1.4
2,886,604 + ECD_02742 0.41 -1.2
2,886,616 + ECD_02742 0.44 -0.2
2,886,656 + ECD_02742 0.56 -0.6
2,886,657 - ECD_02742 0.57 +1.2
2,886,738 + ECD_02742 0.81 -0.4
2,886,738 + ECD_02742 0.81 -0.6
2,886,738 + ECD_02742 0.81 -0.3
2,886,738 + ECD_02742 0.81 -0.6
2,886,738 + ECD_02742 0.81 -1.2
2,886,738 + ECD_02742 0.81 -1.7
2,886,738 + ECD_02742 0.81 -2.1
2,886,750 + ECD_02742 0.85 -1.7
2,886,750 + ECD_02742 0.85 +1.0
2,886,781 + +0.8
2,886,812 + -1.8
2,886,820 + -0.2
2,886,820 + +0.6
2,886,820 + +0.0
2,886,820 + -0.4
2,886,820 + +0.2
2,886,820 + +0.1
2,886,891 + +0.5
2,887,030 + +0.6
2,887,030 + -0.4
2,887,030 + -0.1
2,887,030 + +0.7
2,887,055 + +0.2
2,887,256 + ECD_02743 0.29 +0.3
2,887,256 + ECD_02743 0.29 -0.6
2,887,256 + ECD_02743 0.29 -0.6
2,887,256 + ECD_02743 0.29 -0.6
2,887,286 + ECD_02743 0.34 -0.2
2,887,288 + ECD_02743 0.34 +0.0
2,887,288 + ECD_02743 0.34 -1.1
2,887,465 + ECD_02743 0.67 -0.5
2,887,498 + ECD_02743 0.73 -0.1
2,887,511 + ECD_02743 0.75 -0.4
2,887,529 - ECD_02743 0.78 -0.5
2,887,620 + +0.8
2,887,696 + -0.7
2,887,696 + +0.1
2,887,697 - +0.3
2,887,708 + -0.2
2,887,749 + +0.6
2,887,749 + -0.1
2,887,752 + -2.1
2,887,753 - -0.3
2,887,753 - +0.1
2,887,753 - +0.5
2,887,766 + +0.7
2,887,772 + +0.0
2,887,772 + +0.3
2,887,772 + +1.9
2,887,772 + -0.0
2,887,772 + +0.2
2,887,778 + -0.0
2,887,778 + +0.2
2,887,778 + +0.0
2,887,778 + -0.1
2,887,778 + -1.8
2,887,779 - +0.6
2,887,779 - -0.5
2,887,787 + +1.5
2,887,787 + +0.6
2,887,787 + -2.1
2,887,787 + -0.1
2,887,807 + -0.3
2,887,879 - +1.5
2,888,038 - -2.1
2,888,040 + +0.8
2,888,041 - -0.8
2,888,041 - +0.6
2,888,072 - -0.4
2,888,136 + +0.0
2,888,136 + +0.2
2,888,137 - -1.8
2,888,137 - -1.3
2,888,137 - -0.7
2,888,137 - -0.5
2,888,137 - -0.8
2,888,216 + ECD_02744 0.15 -1.0
2,888,325 + ECD_02744 0.23 -0.1
2,888,326 - ECD_02744 0.24 -0.4
2,888,326 - ECD_02744 0.24 +0.9
2,888,326 - ECD_02744 0.24 +0.2
2,888,437 + ECD_02744 0.33 -1.8
2,888,438 - ECD_02744 0.33 -0.7
2,888,438 - ECD_02744 0.33 -1.4
2,888,438 - ECD_02744 0.33 +0.3
2,888,475 - ECD_02744 0.36 -0.4
2,888,560 + ECD_02744 0.42 -0.1
2,888,561 - ECD_02744 0.43 +0.0
2,888,612 - ECD_02744 0.47 -0.5
2,888,612 - ECD_02744 0.47 -0.0
2,888,612 - ECD_02744 0.47 -0.9
2,888,637 - ECD_02744 0.49 -1.3
2,888,637 - ECD_02744 0.49 -0.5
2,888,637 - ECD_02744 0.49 +0.3

Or see this region's nucleotide sequence