Experiment: Laval1261
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02717 and ECD_02718 are separated by 35 nucleotides ECD_02718 and ECD_02719 overlap by 1 nucleotides ECD_02719 and ECD_02720 are separated by 435 nucleotides
ECD_02717: ECD_02717 - guanine/hypoxanthine permease, high affinity; guanine/hypoxanthine:H+ symporter, at 2,857,982 to 2,859,349
_02717
ECD_02718: ECD_02718 - putative 4Fe-4S ferredoxin-type oxidoreductase subunit, at 2,859,385 to 2,859,873
_02718
ECD_02719: ECD_02719 - putative oxidoreductase, Fe-S subunit/nucleotide-binding subunit, at 2,859,873 to 2,861,792
_02719
ECD_02720: ECD_02720 - uric acid permease, at 2,862,228 to 2,863,676
_02720
Position (kb)
2859
2860
2861
2862 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2858.910 kb on + strand, within ECD_02717 at 2858.910 kb on + strand, within ECD_02717 at 2858.910 kb on + strand, within ECD_02717 at 2858.957 kb on + strand, within ECD_02717 at 2858.958 kb on - strand, within ECD_02717 at 2859.049 kb on - strand, within ECD_02717 at 2859.101 kb on + strand, within ECD_02717 at 2859.101 kb on + strand, within ECD_02717 at 2859.101 kb on + strand, within ECD_02717 at 2859.101 kb on + strand, within ECD_02717 at 2859.102 kb on - strand, within ECD_02717 at 2859.102 kb on - strand, within ECD_02717 at 2859.102 kb on - strand, within ECD_02717 at 2859.102 kb on - strand, within ECD_02717 at 2859.105 kb on + strand, within ECD_02717 at 2859.105 kb on + strand, within ECD_02717 at 2859.106 kb on - strand, within ECD_02717 at 2859.106 kb on - strand, within ECD_02717 at 2859.106 kb on - strand, within ECD_02717 at 2859.106 kb on - strand, within ECD_02717 at 2859.106 kb on - strand, within ECD_02717 at 2859.120 kb on + strand, within ECD_02717 at 2859.120 kb on + strand, within ECD_02717 at 2859.120 kb on + strand, within ECD_02717 at 2859.120 kb on + strand, within ECD_02717 at 2859.121 kb on - strand, within ECD_02717 at 2859.121 kb on - strand, within ECD_02717 at 2859.124 kb on + strand, within ECD_02717 at 2859.125 kb on - strand, within ECD_02717 at 2859.125 kb on - strand, within ECD_02717 at 2859.155 kb on - strand, within ECD_02717 at 2859.155 kb on - strand, within ECD_02717 at 2859.163 kb on + strand, within ECD_02717 at 2859.205 kb on + strand, within ECD_02717 at 2859.205 kb on + strand, within ECD_02717 at 2859.205 kb on + strand, within ECD_02717 at 2859.205 kb on + strand, within ECD_02717 at 2859.205 kb on + strand, within ECD_02717 at 2859.206 kb on - strand, within ECD_02717 at 2859.206 kb on - strand, within ECD_02717 at 2859.208 kb on + strand, within ECD_02717 at 2859.208 kb on + strand, within ECD_02717 at 2859.209 kb on - strand, within ECD_02717 at 2859.220 kb on + strand at 2859.220 kb on + strand at 2859.223 kb on + strand at 2859.224 kb on - strand at 2859.224 kb on - strand at 2859.224 kb on - strand at 2859.292 kb on + strand at 2859.347 kb on + strand at 2859.348 kb on - strand at 2859.348 kb on - strand at 2859.351 kb on - strand at 2859.414 kb on + strand at 2859.414 kb on + strand at 2859.414 kb on + strand at 2859.415 kb on - strand at 2859.615 kb on + strand, within ECD_02718 at 2859.615 kb on + strand, within ECD_02718 at 2859.615 kb on + strand, within ECD_02718 at 2859.615 kb on + strand, within ECD_02718 at 2859.616 kb on - strand, within ECD_02718 at 2859.746 kb on - strand, within ECD_02718 at 2859.826 kb on - strand at 2859.826 kb on - strand at 2859.826 kb on - strand at 2859.826 kb on - strand at 2859.858 kb on + strand at 2859.858 kb on + strand at 2859.859 kb on - strand at 2859.863 kb on - strand at 2859.888 kb on - strand at 2859.901 kb on - strand at 2860.008 kb on - strand at 2860.011 kb on + strand at 2860.012 kb on - strand at 2860.012 kb on - strand at 2860.012 kb on - strand at 2860.012 kb on - strand at 2860.012 kb on - strand at 2860.016 kb on - strand at 2860.059 kb on - strand at 2860.225 kb on - strand, within ECD_02719 at 2860.250 kb on + strand, within ECD_02719 at 2860.251 kb on - strand, within ECD_02719 at 2860.252 kb on + strand, within ECD_02719 at 2860.252 kb on + strand, within ECD_02719 at 2860.253 kb on - strand, within ECD_02719 at 2860.426 kb on - strand, within ECD_02719 at 2860.440 kb on - strand, within ECD_02719 at 2860.518 kb on + strand, within ECD_02719 at 2860.606 kb on + strand, within ECD_02719 at 2860.632 kb on - strand, within ECD_02719 at 2860.632 kb on - strand, within ECD_02719 at 2860.632 kb on - strand, within ECD_02719 at 2860.655 kb on + strand, within ECD_02719 at 2860.655 kb on + strand, within ECD_02719 at 2860.655 kb on + strand, within ECD_02719 at 2860.656 kb on - strand, within ECD_02719 at 2860.656 kb on - strand, within ECD_02719 at 2860.704 kb on + strand, within ECD_02719 at 2860.704 kb on + strand, within ECD_02719 at 2860.704 kb on + strand, within ECD_02719 at 2860.705 kb on - strand, within ECD_02719 at 2860.705 kb on - strand, within ECD_02719 at 2860.752 kb on - strand, within ECD_02719 at 2860.927 kb on + strand, within ECD_02719 at 2860.928 kb on - strand, within ECD_02719 at 2860.928 kb on - strand, within ECD_02719 at 2860.928 kb on - strand, within ECD_02719 at 2860.946 kb on + strand, within ECD_02719 at 2860.976 kb on + strand, within ECD_02719 at 2861.010 kb on + strand, within ECD_02719 at 2861.011 kb on - strand, within ECD_02719 at 2861.011 kb on - strand, within ECD_02719 at 2861.011 kb on - strand, within ECD_02719 at 2861.011 kb on - strand, within ECD_02719 at 2861.011 kb on - strand, within ECD_02719 at 2861.099 kb on - strand, within ECD_02719 at 2861.108 kb on + strand, within ECD_02719 at 2861.142 kb on - strand, within ECD_02719 at 2861.158 kb on + strand, within ECD_02719 at 2861.158 kb on + strand, within ECD_02719 at 2861.159 kb on - strand, within ECD_02719 at 2861.179 kb on + strand, within ECD_02719 at 2861.180 kb on - strand, within ECD_02719 at 2861.180 kb on - strand, within ECD_02719 at 2861.180 kb on - strand, within ECD_02719 at 2861.180 kb on - strand, within ECD_02719 at 2861.210 kb on - strand, within ECD_02719 at 2861.210 kb on - strand, within ECD_02719 at 2861.210 kb on - strand, within ECD_02719 at 2861.210 kb on - strand, within ECD_02719 at 2861.211 kb on + strand, within ECD_02719 at 2861.211 kb on + strand, within ECD_02719 at 2861.212 kb on - strand, within ECD_02719 at 2861.212 kb on - strand, within ECD_02719 at 2861.358 kb on + strand, within ECD_02719 at 2861.359 kb on - strand, within ECD_02719 at 2861.359 kb on - strand, within ECD_02719 at 2861.448 kb on - strand, within ECD_02719 at 2861.553 kb on + strand, within ECD_02719 at 2861.554 kb on - strand, within ECD_02719 at 2861.554 kb on - strand, within ECD_02719 at 2861.554 kb on - strand, within ECD_02719 at 2861.659 kb on - strand at 2861.659 kb on - strand at 2861.659 kb on - strand at 2861.669 kb on + strand at 2861.670 kb on - strand at 2861.755 kb on - strand at 2861.757 kb on - strand at 2861.757 kb on - strand at 2861.757 kb on - strand at 2861.757 kb on - strand at 2861.757 kb on - strand at 2861.757 kb on - strand at 2861.817 kb on + strand at 2861.817 kb on + strand at 2861.855 kb on - strand at 2861.855 kb on - strand at 2861.855 kb on - strand at 2861.855 kb on - strand at 2861.855 kb on - strand at 2861.856 kb on + strand at 2861.857 kb on - strand at 2861.857 kb on - strand at 2861.857 kb on - strand at 2861.857 kb on - strand at 2861.860 kb on - strand at 2861.864 kb on - strand at 2861.907 kb on - strand at 2862.121 kb on + strand at 2862.122 kb on - strand at 2862.238 kb on + strand at 2862.238 kb on + strand at 2862.239 kb on - strand at 2862.301 kb on + strand at 2862.301 kb on + strand at 2862.301 kb on + strand at 2862.322 kb on + strand at 2862.322 kb on + strand at 2862.351 kb on + strand at 2862.351 kb on + strand at 2862.351 kb on + strand at 2862.352 kb on - strand at 2862.413 kb on + strand, within ECD_02720 at 2862.414 kb on - strand, within ECD_02720 at 2862.414 kb on - strand, within ECD_02720 at 2862.464 kb on - strand, within ECD_02720 at 2862.473 kb on + strand, within ECD_02720 at 2862.474 kb on - strand, within ECD_02720 at 2862.516 kb on - strand, within ECD_02720 at 2862.516 kb on - strand, within ECD_02720 at 2862.538 kb on + strand, within ECD_02720 at 2862.550 kb on + strand, within ECD_02720 at 2862.551 kb on - strand, within ECD_02720 at 2862.628 kb on + strand, within ECD_02720 at 2862.628 kb on + strand, within ECD_02720 at 2862.629 kb on - strand, within ECD_02720 at 2862.692 kb on + strand, within ECD_02720 at 2862.692 kb on + strand, within ECD_02720 at 2862.693 kb on - strand, within ECD_02720 at 2862.693 kb on - strand, within ECD_02720 at 2862.693 kb on - strand, within ECD_02720 at 2862.698 kb on + strand, within ECD_02720 at 2862.708 kb on - strand, within ECD_02720 at 2862.708 kb on - strand, within ECD_02720 at 2862.781 kb on + strand, within ECD_02720 at 2862.781 kb on + strand, within ECD_02720 at 2862.785 kb on + strand, within ECD_02720
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1261 remove 2,858,910 + ECD_02717 0.68 +1.3 2,858,910 + ECD_02717 0.68 +1.5 2,858,910 + ECD_02717 0.68 +0.6 2,858,957 + ECD_02717 0.71 +0.8 2,858,958 - ECD_02717 0.71 -0.2 2,859,049 - ECD_02717 0.78 +0.7 2,859,101 + ECD_02717 0.82 +0.4 2,859,101 + ECD_02717 0.82 +0.2 2,859,101 + ECD_02717 0.82 -1.5 2,859,101 + ECD_02717 0.82 -0.7 2,859,102 - ECD_02717 0.82 -1.0 2,859,102 - ECD_02717 0.82 -0.6 2,859,102 - ECD_02717 0.82 -0.8 2,859,102 - ECD_02717 0.82 -0.5 2,859,105 + ECD_02717 0.82 +0.6 2,859,105 + ECD_02717 0.82 +0.2 2,859,106 - ECD_02717 0.82 -1.0 2,859,106 - ECD_02717 0.82 +0.5 2,859,106 - ECD_02717 0.82 -0.8 2,859,106 - ECD_02717 0.82 +0.8 2,859,106 - ECD_02717 0.82 +0.0 2,859,120 + ECD_02717 0.83 +0.4 2,859,120 + ECD_02717 0.83 -0.1 2,859,120 + ECD_02717 0.83 +0.4 2,859,120 + ECD_02717 0.83 -0.1 2,859,121 - ECD_02717 0.83 -1.2 2,859,121 - ECD_02717 0.83 +0.0 2,859,124 + ECD_02717 0.83 -1.8 2,859,125 - ECD_02717 0.84 -0.6 2,859,125 - ECD_02717 0.84 -0.4 2,859,155 - ECD_02717 0.86 +0.3 2,859,155 - ECD_02717 0.86 -0.6 2,859,163 + ECD_02717 0.86 +0.3 2,859,205 + ECD_02717 0.89 -0.2 2,859,205 + ECD_02717 0.89 -1.1 2,859,205 + ECD_02717 0.89 +0.4 2,859,205 + ECD_02717 0.89 -0.5 2,859,205 + ECD_02717 0.89 -1.3 2,859,206 - ECD_02717 0.89 +1.0 2,859,206 - ECD_02717 0.89 +1.2 2,859,208 + ECD_02717 0.90 -1.8 2,859,208 + ECD_02717 0.90 +0.6 2,859,209 - ECD_02717 0.90 +0.2 2,859,220 + -0.4 2,859,220 + +0.6 2,859,223 + +1.6 2,859,224 - +0.5 2,859,224 - -0.4 2,859,224 - -1.3 2,859,292 + -0.2 2,859,347 + -0.1 2,859,348 - -0.6 2,859,348 - -0.3 2,859,351 - -0.5 2,859,414 + -0.0 2,859,414 + -0.5 2,859,414 + -0.9 2,859,415 - -0.3 2,859,615 + ECD_02718 0.47 +0.1 2,859,615 + ECD_02718 0.47 -0.3 2,859,615 + ECD_02718 0.47 -0.5 2,859,615 + ECD_02718 0.47 +0.7 2,859,616 - ECD_02718 0.47 +0.3 2,859,746 - ECD_02718 0.74 +0.2 2,859,826 - -0.6 2,859,826 - +0.3 2,859,826 - +0.4 2,859,826 - +0.5 2,859,858 + -0.3 2,859,858 + +1.3 2,859,859 - -0.4 2,859,863 - -0.4 2,859,888 - -0.7 2,859,901 - -0.3 2,860,008 - -0.2 2,860,011 + +1.1 2,860,012 - +0.0 2,860,012 - -0.5 2,860,012 - -0.2 2,860,012 - -0.8 2,860,012 - +0.3 2,860,016 - +0.3 2,860,059 - -0.3 2,860,225 - ECD_02719 0.18 +0.2 2,860,250 + ECD_02719 0.20 +0.4 2,860,251 - ECD_02719 0.20 +0.5 2,860,252 + ECD_02719 0.20 +0.2 2,860,252 + ECD_02719 0.20 -0.2 2,860,253 - ECD_02719 0.20 +0.0 2,860,426 - ECD_02719 0.29 +0.5 2,860,440 - ECD_02719 0.30 -0.7 2,860,518 + ECD_02719 0.34 -1.2 2,860,606 + ECD_02719 0.38 -0.1 2,860,632 - ECD_02719 0.40 -3.1 2,860,632 - ECD_02719 0.40 -0.2 2,860,632 - ECD_02719 0.40 +0.4 2,860,655 + ECD_02719 0.41 +0.5 2,860,655 + ECD_02719 0.41 -0.4 2,860,655 + ECD_02719 0.41 +0.4 2,860,656 - ECD_02719 0.41 -0.4 2,860,656 - ECD_02719 0.41 -0.7 2,860,704 + ECD_02719 0.43 +0.1 2,860,704 + ECD_02719 0.43 -0.7 2,860,704 + ECD_02719 0.43 +0.1 2,860,705 - ECD_02719 0.43 -0.1 2,860,705 - ECD_02719 0.43 -0.6 2,860,752 - ECD_02719 0.46 -0.6 2,860,927 + ECD_02719 0.55 +0.0 2,860,928 - ECD_02719 0.55 -0.4 2,860,928 - ECD_02719 0.55 -1.7 2,860,928 - ECD_02719 0.55 -0.1 2,860,946 + ECD_02719 0.56 +0.2 2,860,976 + ECD_02719 0.57 -0.8 2,861,010 + ECD_02719 0.59 -1.8 2,861,011 - ECD_02719 0.59 +0.0 2,861,011 - ECD_02719 0.59 -0.7 2,861,011 - ECD_02719 0.59 +0.1 2,861,011 - ECD_02719 0.59 +1.5 2,861,011 - ECD_02719 0.59 -0.4 2,861,099 - ECD_02719 0.64 +0.4 2,861,108 + ECD_02719 0.64 +0.4 2,861,142 - ECD_02719 0.66 -0.5 2,861,158 + ECD_02719 0.67 +0.6 2,861,158 + ECD_02719 0.67 +1.0 2,861,159 - ECD_02719 0.67 +0.4 2,861,179 + ECD_02719 0.68 +0.2 2,861,180 - ECD_02719 0.68 +0.4 2,861,180 - ECD_02719 0.68 -1.7 2,861,180 - ECD_02719 0.68 +0.3 2,861,180 - ECD_02719 0.68 -0.1 2,861,210 - ECD_02719 0.70 -0.8 2,861,210 - ECD_02719 0.70 -0.0 2,861,210 - ECD_02719 0.70 +0.8 2,861,210 - ECD_02719 0.70 -0.2 2,861,211 + ECD_02719 0.70 -2.3 2,861,211 + ECD_02719 0.70 +0.3 2,861,212 - ECD_02719 0.70 -0.2 2,861,212 - ECD_02719 0.70 +0.2 2,861,358 + ECD_02719 0.77 -0.6 2,861,359 - ECD_02719 0.77 -0.8 2,861,359 - ECD_02719 0.77 +3.1 2,861,448 - ECD_02719 0.82 +0.7 2,861,553 + ECD_02719 0.88 -0.1 2,861,554 - ECD_02719 0.88 +1.5 2,861,554 - ECD_02719 0.88 -0.4 2,861,554 - ECD_02719 0.88 +0.2 2,861,659 - -0.1 2,861,659 - -0.8 2,861,659 - +1.1 2,861,669 + -0.2 2,861,670 - -0.5 2,861,755 - -1.2 2,861,757 - +0.0 2,861,757 - -0.1 2,861,757 - +0.2 2,861,757 - +0.4 2,861,757 - +1.8 2,861,757 - +0.5 2,861,817 + +0.4 2,861,817 + +0.9 2,861,855 - -1.5 2,861,855 - +0.6 2,861,855 - +2.1 2,861,855 - +0.6 2,861,855 - +0.4 2,861,856 + +0.2 2,861,857 - +0.9 2,861,857 - +0.8 2,861,857 - -0.5 2,861,857 - +0.9 2,861,860 - -1.1 2,861,864 - +0.1 2,861,907 - -0.2 2,862,121 + -0.0 2,862,122 - -0.6 2,862,238 + -0.2 2,862,238 + -0.9 2,862,239 - -0.8 2,862,301 + +0.8 2,862,301 + -0.9 2,862,301 + +0.2 2,862,322 + +1.0 2,862,322 + -0.8 2,862,351 + +1.2 2,862,351 + -0.5 2,862,351 + -0.5 2,862,352 - -0.1 2,862,413 + ECD_02720 0.13 -1.0 2,862,414 - ECD_02720 0.13 +0.2 2,862,414 - ECD_02720 0.13 -0.3 2,862,464 - ECD_02720 0.16 +0.4 2,862,473 + ECD_02720 0.17 -1.7 2,862,474 - ECD_02720 0.17 -0.3 2,862,516 - ECD_02720 0.20 +0.1 2,862,516 - ECD_02720 0.20 -0.6 2,862,538 + ECD_02720 0.21 +0.1 2,862,550 + ECD_02720 0.22 +0.5 2,862,551 - ECD_02720 0.22 -0.8 2,862,628 + ECD_02720 0.28 +0.7 2,862,628 + ECD_02720 0.28 -0.4 2,862,629 - ECD_02720 0.28 +0.8 2,862,692 + ECD_02720 0.32 -0.6 2,862,692 + ECD_02720 0.32 +0.6 2,862,693 - ECD_02720 0.32 -0.1 2,862,693 - ECD_02720 0.32 +1.3 2,862,693 - ECD_02720 0.32 -0.2 2,862,698 + ECD_02720 0.32 -0.4 2,862,708 - ECD_02720 0.33 +0.2 2,862,708 - ECD_02720 0.33 +0.8 2,862,781 + ECD_02720 0.38 -0.2 2,862,781 + ECD_02720 0.38 +0.3 2,862,785 + ECD_02720 0.38 -0.7
Or see this region's nucleotide sequence