Strain Fitness in Escherichia coli BL21 around ECD_02656

Experiment: Laval1261

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02654 and ECD_02655 are separated by 1 nucleotidesECD_02655 and ECD_02656 are separated by 57 nucleotidesECD_02656 and ECD_02657 are separated by 43 nucleotides ECD_02654: ECD_02654 - L-fuculokinase, at 2,775,748 to 2,777,166 _02654 ECD_02655: ECD_02655 - L-fucose mutarotase, at 2,777,168 to 2,777,590 _02655 ECD_02656: ECD_02656 - l-fucose operon activator, at 2,777,648 to 2,778,379 _02656 ECD_02657: ECD_02657 - 23S rRNA C2498 2'-O-ribose methyltransferase, SAM-dependent, at 2,778,423 to 2,779,523 _02657 Position (kb) 2777 2778 2779Strain fitness (log2 ratio) -2 -1 0 1 2at 2776.781 kb on + strand, within ECD_02654at 2776.781 kb on + strand, within ECD_02654at 2776.782 kb on - strand, within ECD_02654at 2776.822 kb on - strand, within ECD_02654at 2776.824 kb on + strand, within ECD_02654at 2776.827 kb on + strand, within ECD_02654at 2776.866 kb on - strand, within ECD_02654at 2776.878 kb on - strand, within ECD_02654at 2776.889 kb on + strand, within ECD_02654at 2776.931 kb on + strand, within ECD_02654at 2776.986 kb on + strand, within ECD_02654at 2776.986 kb on + strand, within ECD_02654at 2777.076 kb on + strandat 2777.122 kb on + strandat 2777.128 kb on + strandat 2777.151 kb on + strandat 2777.154 kb on - strandat 2777.190 kb on + strandat 2777.363 kb on + strand, within ECD_02655at 2777.363 kb on + strand, within ECD_02655at 2777.395 kb on - strand, within ECD_02655at 2777.421 kb on + strand, within ECD_02655at 2777.421 kb on + strand, within ECD_02655at 2777.438 kb on - strand, within ECD_02655at 2777.452 kb on - strand, within ECD_02655at 2777.498 kb on + strand, within ECD_02655at 2777.499 kb on - strand, within ECD_02655at 2777.560 kb on + strandat 2777.588 kb on + strandat 2777.596 kb on + strandat 2777.596 kb on + strandat 2777.647 kb on + strandat 2777.673 kb on + strandat 2777.695 kb on + strandat 2777.695 kb on + strandat 2777.695 kb on + strandat 2777.741 kb on - strand, within ECD_02656at 2777.812 kb on + strand, within ECD_02656at 2777.816 kb on + strand, within ECD_02656at 2777.816 kb on + strand, within ECD_02656at 2777.816 kb on + strand, within ECD_02656at 2777.816 kb on + strand, within ECD_02656at 2777.817 kb on - strand, within ECD_02656at 2777.817 kb on - strand, within ECD_02656at 2777.817 kb on - strand, within ECD_02656at 2777.818 kb on + strand, within ECD_02656at 2777.818 kb on + strand, within ECD_02656at 2777.819 kb on - strand, within ECD_02656at 2777.876 kb on + strand, within ECD_02656at 2777.943 kb on + strand, within ECD_02656at 2777.943 kb on + strand, within ECD_02656at 2777.966 kb on + strand, within ECD_02656at 2778.014 kb on - strand, within ECD_02656at 2778.092 kb on + strand, within ECD_02656at 2778.092 kb on + strand, within ECD_02656at 2778.093 kb on - strand, within ECD_02656at 2778.093 kb on - strand, within ECD_02656at 2778.101 kb on + strand, within ECD_02656at 2778.102 kb on - strand, within ECD_02656at 2778.102 kb on - strand, within ECD_02656at 2778.102 kb on - strand, within ECD_02656at 2778.102 kb on - strand, within ECD_02656at 2778.130 kb on + strand, within ECD_02656at 2778.131 kb on - strand, within ECD_02656at 2778.237 kb on + strand, within ECD_02656at 2778.271 kb on + strand, within ECD_02656at 2778.277 kb on + strand, within ECD_02656at 2778.324 kb on + strandat 2778.334 kb on + strandat 2778.334 kb on + strandat 2778.334 kb on + strandat 2778.334 kb on + strandat 2778.500 kb on - strandat 2778.500 kb on - strandat 2778.528 kb on + strandat 2778.529 kb on - strandat 2778.529 kb on - strandat 2778.529 kb on - strandat 2778.558 kb on - strand, within ECD_02657at 2778.559 kb on + strand, within ECD_02657at 2778.559 kb on + strand, within ECD_02657at 2778.559 kb on + strand, within ECD_02657at 2778.559 kb on + strand, within ECD_02657at 2778.560 kb on - strand, within ECD_02657at 2778.560 kb on - strand, within ECD_02657at 2778.560 kb on - strand, within ECD_02657at 2778.560 kb on - strand, within ECD_02657at 2778.560 kb on - strand, within ECD_02657at 2778.699 kb on + strand, within ECD_02657at 2778.713 kb on + strand, within ECD_02657at 2778.714 kb on - strand, within ECD_02657at 2778.714 kb on - strand, within ECD_02657at 2778.714 kb on - strand, within ECD_02657at 2778.714 kb on - strand, within ECD_02657at 2778.714 kb on - strand, within ECD_02657at 2778.714 kb on - strand, within ECD_02657at 2778.714 kb on - strand, within ECD_02657at 2778.714 kb on - strand, within ECD_02657at 2778.815 kb on - strand, within ECD_02657at 2778.844 kb on + strand, within ECD_02657at 2778.845 kb on - strand, within ECD_02657at 2778.926 kb on + strand, within ECD_02657at 2778.927 kb on - strand, within ECD_02657at 2778.927 kb on - strand, within ECD_02657at 2778.927 kb on - strand, within ECD_02657at 2778.927 kb on - strand, within ECD_02657at 2778.927 kb on - strand, within ECD_02657at 2779.008 kb on - strand, within ECD_02657at 2779.008 kb on - strand, within ECD_02657at 2779.009 kb on + strand, within ECD_02657at 2779.009 kb on + strand, within ECD_02657at 2779.009 kb on + strand, within ECD_02657at 2779.009 kb on + strand, within ECD_02657at 2779.010 kb on - strand, within ECD_02657at 2779.010 kb on - strand, within ECD_02657at 2779.010 kb on - strand, within ECD_02657at 2779.010 kb on - strand, within ECD_02657at 2779.010 kb on - strand, within ECD_02657at 2779.010 kb on - strand, within ECD_02657at 2779.010 kb on - strand, within ECD_02657at 2779.010 kb on - strand, within ECD_02657at 2779.010 kb on - strand, within ECD_02657at 2779.010 kb on - strand, within ECD_02657at 2779.010 kb on - strand, within ECD_02657at 2779.034 kb on - strand, within ECD_02657at 2779.034 kb on - strand, within ECD_02657at 2779.034 kb on - strand, within ECD_02657at 2779.034 kb on - strand, within ECD_02657at 2779.039 kb on + strand, within ECD_02657at 2779.048 kb on + strand, within ECD_02657at 2779.048 kb on + strand, within ECD_02657at 2779.048 kb on + strand, within ECD_02657at 2779.049 kb on - strand, within ECD_02657at 2779.049 kb on - strand, within ECD_02657at 2779.068 kb on - strand, within ECD_02657at 2779.074 kb on + strand, within ECD_02657at 2779.074 kb on + strand, within ECD_02657at 2779.074 kb on + strand, within ECD_02657at 2779.075 kb on - strand, within ECD_02657at 2779.075 kb on - strand, within ECD_02657at 2779.075 kb on - strand, within ECD_02657at 2779.075 kb on - strand, within ECD_02657at 2779.075 kb on - strand, within ECD_02657at 2779.075 kb on - strand, within ECD_02657at 2779.075 kb on - strand, within ECD_02657at 2779.075 kb on - strand, within ECD_02657at 2779.075 kb on - strand, within ECD_02657at 2779.106 kb on - strand, within ECD_02657at 2779.234 kb on - strand, within ECD_02657at 2779.236 kb on + strand, within ECD_02657at 2779.236 kb on + strand, within ECD_02657at 2779.236 kb on + strand, within ECD_02657at 2779.268 kb on + strand, within ECD_02657at 2779.269 kb on - strand, within ECD_02657at 2779.269 kb on - strand, within ECD_02657at 2779.269 kb on - strand, within ECD_02657at 2779.360 kb on - strand, within ECD_02657

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1261
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2,776,781 + ECD_02654 0.73 -0.5
2,776,781 + ECD_02654 0.73 +0.3
2,776,782 - ECD_02654 0.73 +1.1
2,776,822 - ECD_02654 0.76 +0.3
2,776,824 + ECD_02654 0.76 +0.6
2,776,827 + ECD_02654 0.76 +0.9
2,776,866 - ECD_02654 0.79 -0.4
2,776,878 - ECD_02654 0.80 +0.7
2,776,889 + ECD_02654 0.80 -0.4
2,776,931 + ECD_02654 0.83 +0.7
2,776,986 + ECD_02654 0.87 +0.6
2,776,986 + ECD_02654 0.87 +0.1
2,777,076 + -0.0
2,777,122 + -0.3
2,777,128 + -0.2
2,777,151 + -1.5
2,777,154 - +0.7
2,777,190 + +1.2
2,777,363 + ECD_02655 0.46 -0.4
2,777,363 + ECD_02655 0.46 -0.4
2,777,395 - ECD_02655 0.54 +1.8
2,777,421 + ECD_02655 0.60 -0.2
2,777,421 + ECD_02655 0.60 +1.4
2,777,438 - ECD_02655 0.64 -0.5
2,777,452 - ECD_02655 0.67 -0.3
2,777,498 + ECD_02655 0.78 -1.2
2,777,499 - ECD_02655 0.78 +0.4
2,777,560 + -0.8
2,777,588 + -1.2
2,777,596 + -0.4
2,777,596 + +0.5
2,777,647 + +0.3
2,777,673 + +1.0
2,777,695 + -0.2
2,777,695 + -0.1
2,777,695 + -1.9
2,777,741 - ECD_02656 0.13 +0.1
2,777,812 + ECD_02656 0.22 -0.0
2,777,816 + ECD_02656 0.23 +0.3
2,777,816 + ECD_02656 0.23 -0.1
2,777,816 + ECD_02656 0.23 +0.7
2,777,816 + ECD_02656 0.23 -0.3
2,777,817 - ECD_02656 0.23 +0.2
2,777,817 - ECD_02656 0.23 -0.5
2,777,817 - ECD_02656 0.23 +0.5
2,777,818 + ECD_02656 0.23 +0.4
2,777,818 + ECD_02656 0.23 -0.6
2,777,819 - ECD_02656 0.23 -1.2
2,777,876 + ECD_02656 0.31 -0.2
2,777,943 + ECD_02656 0.40 +1.3
2,777,943 + ECD_02656 0.40 -2.7
2,777,966 + ECD_02656 0.43 +0.4
2,778,014 - ECD_02656 0.50 -1.1
2,778,092 + ECD_02656 0.61 -1.4
2,778,092 + ECD_02656 0.61 -0.5
2,778,093 - ECD_02656 0.61 +0.2
2,778,093 - ECD_02656 0.61 -0.1
2,778,101 + ECD_02656 0.62 -0.1
2,778,102 - ECD_02656 0.62 +0.5
2,778,102 - ECD_02656 0.62 -0.6
2,778,102 - ECD_02656 0.62 +0.4
2,778,102 - ECD_02656 0.62 +0.4
2,778,130 + ECD_02656 0.66 -0.7
2,778,131 - ECD_02656 0.66 -0.1
2,778,237 + ECD_02656 0.80 -0.2
2,778,271 + ECD_02656 0.85 -0.1
2,778,277 + ECD_02656 0.86 -1.3
2,778,324 + +0.2
2,778,334 + +0.8
2,778,334 + +1.1
2,778,334 + -0.9
2,778,334 + -0.8
2,778,500 - +0.5
2,778,500 - -0.9
2,778,528 + +0.5
2,778,529 - -0.5
2,778,529 - -0.3
2,778,529 - +0.3
2,778,558 - ECD_02657 0.12 -0.3
2,778,559 + ECD_02657 0.12 -0.3
2,778,559 + ECD_02657 0.12 -0.5
2,778,559 + ECD_02657 0.12 -0.9
2,778,559 + ECD_02657 0.12 -0.6
2,778,560 - ECD_02657 0.12 -2.1
2,778,560 - ECD_02657 0.12 -1.8
2,778,560 - ECD_02657 0.12 -0.2
2,778,560 - ECD_02657 0.12 +0.3
2,778,560 - ECD_02657 0.12 +0.0
2,778,699 + ECD_02657 0.25 -0.8
2,778,713 + ECD_02657 0.26 +0.3
2,778,714 - ECD_02657 0.26 -1.1
2,778,714 - ECD_02657 0.26 -0.4
2,778,714 - ECD_02657 0.26 +0.3
2,778,714 - ECD_02657 0.26 +0.6
2,778,714 - ECD_02657 0.26 -0.7
2,778,714 - ECD_02657 0.26 -0.1
2,778,714 - ECD_02657 0.26 -0.3
2,778,714 - ECD_02657 0.26 -0.8
2,778,815 - ECD_02657 0.36 -0.1
2,778,844 + ECD_02657 0.38 +0.2
2,778,845 - ECD_02657 0.38 +0.1
2,778,926 + ECD_02657 0.46 +0.7
2,778,927 - ECD_02657 0.46 -1.2
2,778,927 - ECD_02657 0.46 +0.4
2,778,927 - ECD_02657 0.46 +0.3
2,778,927 - ECD_02657 0.46 -0.5
2,778,927 - ECD_02657 0.46 -0.7
2,779,008 - ECD_02657 0.53 -0.8
2,779,008 - ECD_02657 0.53 -0.1
2,779,009 + ECD_02657 0.53 -0.4
2,779,009 + ECD_02657 0.53 +0.3
2,779,009 + ECD_02657 0.53 -0.5
2,779,009 + ECD_02657 0.53 +0.0
2,779,010 - ECD_02657 0.53 -1.2
2,779,010 - ECD_02657 0.53 -0.5
2,779,010 - ECD_02657 0.53 -0.1
2,779,010 - ECD_02657 0.53 -0.1
2,779,010 - ECD_02657 0.53 +0.5
2,779,010 - ECD_02657 0.53 -0.3
2,779,010 - ECD_02657 0.53 -0.4
2,779,010 - ECD_02657 0.53 -1.2
2,779,010 - ECD_02657 0.53 +0.1
2,779,010 - ECD_02657 0.53 +0.1
2,779,010 - ECD_02657 0.53 -1.0
2,779,034 - ECD_02657 0.55 +0.0
2,779,034 - ECD_02657 0.55 +0.2
2,779,034 - ECD_02657 0.55 +0.7
2,779,034 - ECD_02657 0.55 -0.7
2,779,039 + ECD_02657 0.56 -0.2
2,779,048 + ECD_02657 0.57 -0.9
2,779,048 + ECD_02657 0.57 -0.1
2,779,048 + ECD_02657 0.57 +0.5
2,779,049 - ECD_02657 0.57 -1.0
2,779,049 - ECD_02657 0.57 +0.1
2,779,068 - ECD_02657 0.59 +0.8
2,779,074 + ECD_02657 0.59 +0.5
2,779,074 + ECD_02657 0.59 +1.1
2,779,074 + ECD_02657 0.59 -0.9
2,779,075 - ECD_02657 0.59 -1.5
2,779,075 - ECD_02657 0.59 +0.6
2,779,075 - ECD_02657 0.59 +0.5
2,779,075 - ECD_02657 0.59 -0.1
2,779,075 - ECD_02657 0.59 +0.3
2,779,075 - ECD_02657 0.59 +0.3
2,779,075 - ECD_02657 0.59 +0.3
2,779,075 - ECD_02657 0.59 -0.1
2,779,075 - ECD_02657 0.59 +0.3
2,779,106 - ECD_02657 0.62 +0.5
2,779,234 - ECD_02657 0.74 -0.7
2,779,236 + ECD_02657 0.74 -0.5
2,779,236 + ECD_02657 0.74 +0.8
2,779,236 + ECD_02657 0.74 +0.7
2,779,268 + ECD_02657 0.77 -0.7
2,779,269 - ECD_02657 0.77 -1.2
2,779,269 - ECD_02657 0.77 -0.5
2,779,269 - ECD_02657 0.77 -0.2
2,779,360 - ECD_02657 0.85 -0.1

Or see this region's nucleotide sequence