Experiment: Laval1261
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02387 and ECD_02388 are separated by 137 nucleotides ECD_02388 and ECD_02389 are separated by 49 nucleotides ECD_02389 and ECD_02390 are separated by 85 nucleotides
ECD_02387: ECD_02387 - putative oxidoreductase, at 2,482,059 to 2,482,418
_02387
ECD_02388: ECD_02388 - ATPase regulatory factor involved in DnaA inactivation, at 2,482,556 to 2,483,302
_02388
ECD_02389: ECD_02389 - uracil permease, at 2,483,352 to 2,484,641
_02389
ECD_02390: ECD_02390 - uracil phosphoribosyltransferase, at 2,484,727 to 2,485,353
_02390
Position (kb)
2483
2484
2485 Strain fitness (log2 ratio)
-1
0
1 at 2482.489 kb on + strand at 2482.490 kb on - strand at 2482.493 kb on - strand at 2482.499 kb on + strand at 2482.554 kb on - strand at 2483.353 kb on + strand at 2483.364 kb on + strand at 2483.564 kb on - strand, within ECD_02389 at 2483.618 kb on - strand, within ECD_02389 at 2483.741 kb on - strand, within ECD_02389 at 2483.784 kb on - strand, within ECD_02389 at 2483.899 kb on - strand, within ECD_02389 at 2483.984 kb on + strand, within ECD_02389 at 2484.018 kb on - strand, within ECD_02389 at 2484.018 kb on - strand, within ECD_02389 at 2484.439 kb on + strand, within ECD_02389 at 2484.498 kb on + strand, within ECD_02389 at 2484.505 kb on - strand, within ECD_02389 at 2484.528 kb on + strand at 2484.642 kb on - strand at 2484.642 kb on - strand at 2484.645 kb on - strand at 2484.660 kb on - strand at 2484.712 kb on - strand at 2484.819 kb on - strand, within ECD_02390 at 2484.859 kb on - strand, within ECD_02390 at 2484.875 kb on - strand, within ECD_02390 at 2484.875 kb on - strand, within ECD_02390 at 2484.997 kb on - strand, within ECD_02390 at 2484.997 kb on - strand, within ECD_02390 at 2485.016 kb on + strand, within ECD_02390 at 2485.017 kb on - strand, within ECD_02390 at 2485.017 kb on - strand, within ECD_02390 at 2485.050 kb on - strand, within ECD_02390 at 2485.050 kb on - strand, within ECD_02390 at 2485.050 kb on - strand, within ECD_02390 at 2485.054 kb on - strand, within ECD_02390 at 2485.108 kb on - strand, within ECD_02390 at 2485.108 kb on - strand, within ECD_02390 at 2485.233 kb on - strand, within ECD_02390 at 2485.233 kb on - strand, within ECD_02390 at 2485.233 kb on - strand, within ECD_02390
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1261 remove 2,482,489 + +0.1 2,482,490 - -0.8 2,482,493 - +0.6 2,482,499 + +1.3 2,482,554 - -0.4 2,483,353 + +0.8 2,483,364 + +0.5 2,483,564 - ECD_02389 0.16 +0.5 2,483,618 - ECD_02389 0.21 +0.9 2,483,741 - ECD_02389 0.30 +0.9 2,483,784 - ECD_02389 0.33 +0.0 2,483,899 - ECD_02389 0.42 +0.3 2,483,984 + ECD_02389 0.49 +0.3 2,484,018 - ECD_02389 0.52 +1.5 2,484,018 - ECD_02389 0.52 +0.5 2,484,439 + ECD_02389 0.84 -0.1 2,484,498 + ECD_02389 0.89 -0.2 2,484,505 - ECD_02389 0.89 +1.2 2,484,528 + +1.6 2,484,642 - +0.9 2,484,642 - +0.2 2,484,645 - +0.9 2,484,660 - +0.4 2,484,712 - +0.2 2,484,819 - ECD_02390 0.15 +1.3 2,484,859 - ECD_02390 0.21 +0.7 2,484,875 - ECD_02390 0.24 +0.1 2,484,875 - ECD_02390 0.24 +0.3 2,484,997 - ECD_02390 0.43 +0.4 2,484,997 - ECD_02390 0.43 +0.3 2,485,016 + ECD_02390 0.46 +1.0 2,485,017 - ECD_02390 0.46 +0.4 2,485,017 - ECD_02390 0.46 -0.1 2,485,050 - ECD_02390 0.52 -0.0 2,485,050 - ECD_02390 0.52 +0.5 2,485,050 - ECD_02390 0.52 +0.6 2,485,054 - ECD_02390 0.52 +0.5 2,485,108 - ECD_02390 0.61 -0.2 2,485,108 - ECD_02390 0.61 +0.0 2,485,233 - ECD_02390 0.81 -0.1 2,485,233 - ECD_02390 0.81 -1.1 2,485,233 - ECD_02390 0.81 +0.6
Or see this region's nucleotide sequence