Strain Fitness in Escherichia coli BL21 around ECD_00961

Experiment: Laval1261

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00959 and ECD_00960 are separated by 185 nucleotidesECD_00960 and ECD_00961 are separated by 75 nucleotidesECD_00961 and ECD_00962 are separated by 356 nucleotides ECD_00959: ECD_00959 - putative peptidase, at 1,021,628 to 1,023,388 _00959 ECD_00960: ECD_00960 - Ter macrodomain organizer matS-binding protein, at 1,023,574 to 1,024,026 _00960 ECD_00961: ECD_00961 - outer membrane protein A (3a, at 1,024,102 to 1,025,142 _00961 ECD_00962: ECD_00962 - SOS cell division inhibitor, at 1,025,499 to 1,026,008 _00962 Position (kb) 1024 1025 1026Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1023.668 kb on + strand, within ECD_00960at 1023.668 kb on + strand, within ECD_00960at 1023.837 kb on + strand, within ECD_00960at 1024.246 kb on - strand, within ECD_00961at 1024.365 kb on - strand, within ECD_00961at 1024.419 kb on - strand, within ECD_00961at 1024.783 kb on - strand, within ECD_00961at 1024.800 kb on - strand, within ECD_00961at 1024.800 kb on - strand, within ECD_00961at 1024.800 kb on - strand, within ECD_00961at 1024.800 kb on - strand, within ECD_00961at 1024.800 kb on - strand, within ECD_00961at 1024.866 kb on - strand, within ECD_00961at 1024.866 kb on - strand, within ECD_00961at 1024.866 kb on - strand, within ECD_00961at 1024.866 kb on - strand, within ECD_00961at 1024.866 kb on - strand, within ECD_00961at 1024.866 kb on - strand, within ECD_00961at 1024.866 kb on - strand, within ECD_00961at 1024.893 kb on - strand, within ECD_00961at 1024.900 kb on - strand, within ECD_00961at 1024.938 kb on - strand, within ECD_00961at 1024.938 kb on - strand, within ECD_00961at 1024.938 kb on - strand, within ECD_00961at 1024.938 kb on - strand, within ECD_00961at 1025.058 kb on - strandat 1025.090 kb on - strandat 1025.195 kb on - strandat 1025.235 kb on - strandat 1025.235 kb on - strandat 1025.281 kb on - strandat 1025.295 kb on - strandat 1025.513 kb on + strandat 1025.579 kb on + strand, within ECD_00962at 1025.580 kb on - strand, within ECD_00962at 1025.674 kb on + strand, within ECD_00962at 1025.675 kb on - strand, within ECD_00962at 1025.675 kb on - strand, within ECD_00962at 1025.675 kb on - strand, within ECD_00962at 1025.745 kb on + strand, within ECD_00962at 1025.745 kb on + strand, within ECD_00962at 1025.746 kb on - strand, within ECD_00962at 1025.746 kb on - strand, within ECD_00962at 1025.746 kb on - strand, within ECD_00962at 1025.848 kb on - strand, within ECD_00962at 1025.863 kb on - strand, within ECD_00962at 1025.863 kb on - strand, within ECD_00962at 1025.863 kb on - strand, within ECD_00962at 1025.863 kb on - strand, within ECD_00962at 1025.913 kb on - strand, within ECD_00962at 1026.004 kb on + strandat 1026.005 kb on - strandat 1026.005 kb on - strandat 1026.008 kb on + strandat 1026.008 kb on + strandat 1026.008 kb on + strandat 1026.008 kb on + strandat 1026.008 kb on + strandat 1026.008 kb on + strandat 1026.008 kb on + strandat 1026.009 kb on - strandat 1026.045 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1261
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1,023,668 + ECD_00960 0.21 -0.4
1,023,668 + ECD_00960 0.21 -0.9
1,023,837 + ECD_00960 0.58 -0.6
1,024,246 - ECD_00961 0.14 -1.7
1,024,365 - ECD_00961 0.25 -1.1
1,024,419 - ECD_00961 0.30 +0.0
1,024,783 - ECD_00961 0.65 -0.2
1,024,800 - ECD_00961 0.67 -0.3
1,024,800 - ECD_00961 0.67 -0.4
1,024,800 - ECD_00961 0.67 -0.8
1,024,800 - ECD_00961 0.67 -0.5
1,024,800 - ECD_00961 0.67 -1.0
1,024,866 - ECD_00961 0.73 -1.2
1,024,866 - ECD_00961 0.73 -0.8
1,024,866 - ECD_00961 0.73 -0.6
1,024,866 - ECD_00961 0.73 -0.7
1,024,866 - ECD_00961 0.73 -0.5
1,024,866 - ECD_00961 0.73 -1.0
1,024,866 - ECD_00961 0.73 -1.1
1,024,893 - ECD_00961 0.76 +0.2
1,024,900 - ECD_00961 0.77 -0.5
1,024,938 - ECD_00961 0.80 -0.2
1,024,938 - ECD_00961 0.80 -0.1
1,024,938 - ECD_00961 0.80 +0.5
1,024,938 - ECD_00961 0.80 +1.7
1,025,058 - -2.9
1,025,090 - -1.4
1,025,195 - +0.0
1,025,235 - -1.2
1,025,235 - -0.4
1,025,281 - -0.5
1,025,295 - -1.1
1,025,513 + -0.7
1,025,579 + ECD_00962 0.16 +0.3
1,025,580 - ECD_00962 0.16 +0.7
1,025,674 + ECD_00962 0.34 +0.4
1,025,675 - ECD_00962 0.35 +0.6
1,025,675 - ECD_00962 0.35 +2.2
1,025,675 - ECD_00962 0.35 +0.1
1,025,745 + ECD_00962 0.48 +0.5
1,025,745 + ECD_00962 0.48 +0.2
1,025,746 - ECD_00962 0.48 +0.1
1,025,746 - ECD_00962 0.48 +0.8
1,025,746 - ECD_00962 0.48 -0.1
1,025,848 - ECD_00962 0.68 -0.1
1,025,863 - ECD_00962 0.71 +1.2
1,025,863 - ECD_00962 0.71 +0.8
1,025,863 - ECD_00962 0.71 +1.2
1,025,863 - ECD_00962 0.71 +1.0
1,025,913 - ECD_00962 0.81 +0.4
1,026,004 + -1.5
1,026,005 - -0.4
1,026,005 - +0.4
1,026,008 + -0.2
1,026,008 + -0.3
1,026,008 + +0.3
1,026,008 + +0.9
1,026,008 + +0.5
1,026,008 + -0.4
1,026,008 + -0.3
1,026,009 - +0.5
1,026,045 - +0.7

Or see this region's nucleotide sequence