Experiment: Laval1259
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_04265 and ECD_04266 are separated by 20 nucleotides ECD_04266 and ECD_04267 are separated by 306 nucleotides
ECD_04265: ECD_04265 - DNA repair protein, at 4,543,267 to 4,544,649
_04265
ECD_04266: ECD_04266 - trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor, at 4,544,670 to 4,545,902
_04266
ECD_04267: ECD_04267 - energy-dependent translational throttle A, at 4,546,209 to 4,547,876
_04267
Position (kb)
4544
4545
4546 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4543.722 kb on + strand, within ECD_04265 at 4543.722 kb on + strand, within ECD_04265 at 4543.722 kb on + strand, within ECD_04265 at 4543.722 kb on + strand, within ECD_04265 at 4543.722 kb on + strand, within ECD_04265 at 4543.723 kb on - strand, within ECD_04265 at 4543.723 kb on - strand, within ECD_04265 at 4543.790 kb on + strand, within ECD_04265 at 4543.790 kb on + strand, within ECD_04265 at 4543.826 kb on + strand, within ECD_04265 at 4543.826 kb on + strand, within ECD_04265 at 4543.827 kb on - strand, within ECD_04265 at 4543.827 kb on - strand, within ECD_04265 at 4543.827 kb on - strand, within ECD_04265 at 4543.873 kb on + strand, within ECD_04265 at 4543.974 kb on + strand, within ECD_04265 at 4543.975 kb on - strand, within ECD_04265 at 4544.391 kb on - strand, within ECD_04265 at 4544.645 kb on + strand at 4544.645 kb on + strand at 4544.645 kb on + strand at 4544.645 kb on + strand at 4544.646 kb on - strand at 4544.647 kb on + strand at 4544.647 kb on + strand at 4544.647 kb on + strand at 4544.648 kb on - strand at 4544.669 kb on + strand at 4544.669 kb on + strand at 4544.669 kb on + strand at 4544.669 kb on + strand at 4544.723 kb on - strand at 4544.723 kb on - strand at 4544.747 kb on + strand at 4544.747 kb on + strand at 4544.764 kb on + strand at 4544.876 kb on - strand, within ECD_04266 at 4544.909 kb on + strand, within ECD_04266 at 4544.909 kb on + strand, within ECD_04266 at 4544.909 kb on + strand, within ECD_04266 at 4544.909 kb on + strand, within ECD_04266 at 4544.909 kb on + strand, within ECD_04266 at 4544.910 kb on - strand, within ECD_04266 at 4544.910 kb on - strand, within ECD_04266 at 4544.910 kb on - strand, within ECD_04266 at 4544.910 kb on - strand, within ECD_04266 at 4544.910 kb on - strand, within ECD_04266 at 4544.910 kb on - strand, within ECD_04266 at 4544.913 kb on + strand, within ECD_04266 at 4544.913 kb on + strand, within ECD_04266 at 4544.913 kb on + strand, within ECD_04266 at 4544.913 kb on + strand, within ECD_04266 at 4544.913 kb on + strand, within ECD_04266 at 4544.914 kb on - strand, within ECD_04266 at 4544.914 kb on - strand, within ECD_04266 at 4545.066 kb on + strand, within ECD_04266 at 4545.195 kb on + strand, within ECD_04266 at 4545.225 kb on + strand, within ECD_04266 at 4545.225 kb on + strand, within ECD_04266 at 4545.225 kb on + strand, within ECD_04266 at 4545.225 kb on + strand, within ECD_04266 at 4545.226 kb on - strand, within ECD_04266 at 4545.226 kb on - strand, within ECD_04266 at 4545.227 kb on + strand, within ECD_04266 at 4545.228 kb on - strand, within ECD_04266 at 4545.228 kb on - strand, within ECD_04266 at 4545.273 kb on - strand, within ECD_04266 at 4545.330 kb on + strand, within ECD_04266 at 4545.330 kb on + strand, within ECD_04266 at 4545.330 kb on + strand, within ECD_04266 at 4545.331 kb on - strand, within ECD_04266 at 4545.332 kb on + strand, within ECD_04266 at 4545.332 kb on + strand, within ECD_04266 at 4545.333 kb on - strand, within ECD_04266 at 4545.333 kb on - strand, within ECD_04266 at 4545.333 kb on - strand, within ECD_04266 at 4545.361 kb on + strand, within ECD_04266 at 4545.361 kb on + strand, within ECD_04266 at 4545.429 kb on - strand, within ECD_04266 at 4545.468 kb on + strand, within ECD_04266 at 4545.633 kb on + strand, within ECD_04266 at 4545.840 kb on + strand at 4546.039 kb on + strand at 4546.039 kb on + strand at 4546.040 kb on - strand at 4546.050 kb on + strand at 4546.122 kb on + strand at 4546.123 kb on - strand at 4546.147 kb on - strand at 4546.210 kb on + strand at 4546.211 kb on - strand at 4546.279 kb on + strand at 4546.280 kb on - strand at 4546.302 kb on - strand at 4546.322 kb on + strand at 4546.359 kb on - strand at 4546.578 kb on - strand, within ECD_04267 at 4546.597 kb on + strand, within ECD_04267 at 4546.634 kb on + strand, within ECD_04267 at 4546.886 kb on + strand, within ECD_04267
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1259 remove 4,543,722 + ECD_04265 0.33 -0.3 4,543,722 + ECD_04265 0.33 -1.3 4,543,722 + ECD_04265 0.33 -0.9 4,543,722 + ECD_04265 0.33 -1.3 4,543,722 + ECD_04265 0.33 +0.0 4,543,723 - ECD_04265 0.33 +0.7 4,543,723 - ECD_04265 0.33 -2.6 4,543,790 + ECD_04265 0.38 +0.0 4,543,790 + ECD_04265 0.38 +0.1 4,543,826 + ECD_04265 0.40 -0.2 4,543,826 + ECD_04265 0.40 -0.2 4,543,827 - ECD_04265 0.40 +0.4 4,543,827 - ECD_04265 0.40 -2.2 4,543,827 - ECD_04265 0.40 -1.3 4,543,873 + ECD_04265 0.44 -1.6 4,543,974 + ECD_04265 0.51 -0.7 4,543,975 - ECD_04265 0.51 -0.1 4,544,391 - ECD_04265 0.81 +1.0 4,544,645 + +0.9 4,544,645 + -0.3 4,544,645 + +0.5 4,544,645 + +0.4 4,544,646 - -1.9 4,544,647 + +0.7 4,544,647 + +0.4 4,544,647 + -0.6 4,544,648 - +0.2 4,544,669 + +0.0 4,544,669 + -0.1 4,544,669 + -0.3 4,544,669 + -0.5 4,544,723 - -0.8 4,544,723 - -0.4 4,544,747 + -0.7 4,544,747 + -0.6 4,544,764 + +0.4 4,544,876 - ECD_04266 0.17 -0.6 4,544,909 + ECD_04266 0.19 -0.5 4,544,909 + ECD_04266 0.19 -1.8 4,544,909 + ECD_04266 0.19 -0.4 4,544,909 + ECD_04266 0.19 -0.9 4,544,909 + ECD_04266 0.19 -0.8 4,544,910 - ECD_04266 0.19 +0.3 4,544,910 - ECD_04266 0.19 -1.9 4,544,910 - ECD_04266 0.19 -0.9 4,544,910 - ECD_04266 0.19 -0.1 4,544,910 - ECD_04266 0.19 +0.8 4,544,910 - ECD_04266 0.19 -1.1 4,544,913 + ECD_04266 0.20 +1.1 4,544,913 + ECD_04266 0.20 -1.3 4,544,913 + ECD_04266 0.20 -0.1 4,544,913 + ECD_04266 0.20 +0.3 4,544,913 + ECD_04266 0.20 +0.0 4,544,914 - ECD_04266 0.20 -0.6 4,544,914 - ECD_04266 0.20 -1.1 4,545,066 + ECD_04266 0.32 +0.1 4,545,195 + ECD_04266 0.43 -0.3 4,545,225 + ECD_04266 0.45 -0.4 4,545,225 + ECD_04266 0.45 +0.0 4,545,225 + ECD_04266 0.45 -1.1 4,545,225 + ECD_04266 0.45 -0.5 4,545,226 - ECD_04266 0.45 -1.0 4,545,226 - ECD_04266 0.45 -1.5 4,545,227 + ECD_04266 0.45 -0.4 4,545,228 - ECD_04266 0.45 -1.2 4,545,228 - ECD_04266 0.45 -0.6 4,545,273 - ECD_04266 0.49 -0.5 4,545,330 + ECD_04266 0.54 -0.2 4,545,330 + ECD_04266 0.54 -0.6 4,545,330 + ECD_04266 0.54 -0.1 4,545,331 - ECD_04266 0.54 -0.1 4,545,332 + ECD_04266 0.54 +0.0 4,545,332 + ECD_04266 0.54 -0.1 4,545,333 - ECD_04266 0.54 +0.6 4,545,333 - ECD_04266 0.54 +0.1 4,545,333 - ECD_04266 0.54 -0.6 4,545,361 + ECD_04266 0.56 +1.1 4,545,361 + ECD_04266 0.56 +0.1 4,545,429 - ECD_04266 0.62 -0.0 4,545,468 + ECD_04266 0.65 -0.7 4,545,633 + ECD_04266 0.78 +1.4 4,545,840 + -0.6 4,546,039 + +0.7 4,546,039 + -0.5 4,546,040 - -0.5 4,546,050 + +0.3 4,546,122 + -0.4 4,546,123 - +0.4 4,546,147 - +0.4 4,546,210 + +0.7 4,546,211 - +0.7 4,546,279 + +0.3 4,546,280 - +1.5 4,546,302 - +1.5 4,546,322 + +0.6 4,546,359 - +1.8 4,546,578 - ECD_04267 0.22 +1.9 4,546,597 + ECD_04267 0.23 +0.5 4,546,634 + ECD_04267 0.25 +0.5 4,546,886 + ECD_04267 0.41 -1.4
Or see this region's nucleotide sequence