Strain Fitness in Escherichia coli BL21 around ECD_04266

Experiment: Laval1259

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_04265 and ECD_04266 are separated by 20 nucleotidesECD_04266 and ECD_04267 are separated by 306 nucleotides ECD_04265: ECD_04265 - DNA repair protein, at 4,543,267 to 4,544,649 _04265 ECD_04266: ECD_04266 - trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor, at 4,544,670 to 4,545,902 _04266 ECD_04267: ECD_04267 - energy-dependent translational throttle A, at 4,546,209 to 4,547,876 _04267 Position (kb) 4544 4545 4546Strain fitness (log2 ratio) -2 -1 0 1 2at 4543.722 kb on + strand, within ECD_04265at 4543.722 kb on + strand, within ECD_04265at 4543.722 kb on + strand, within ECD_04265at 4543.722 kb on + strand, within ECD_04265at 4543.722 kb on + strand, within ECD_04265at 4543.723 kb on - strand, within ECD_04265at 4543.723 kb on - strand, within ECD_04265at 4543.790 kb on + strand, within ECD_04265at 4543.790 kb on + strand, within ECD_04265at 4543.826 kb on + strand, within ECD_04265at 4543.826 kb on + strand, within ECD_04265at 4543.827 kb on - strand, within ECD_04265at 4543.827 kb on - strand, within ECD_04265at 4543.827 kb on - strand, within ECD_04265at 4543.873 kb on + strand, within ECD_04265at 4543.974 kb on + strand, within ECD_04265at 4543.975 kb on - strand, within ECD_04265at 4544.391 kb on - strand, within ECD_04265at 4544.645 kb on + strandat 4544.645 kb on + strandat 4544.645 kb on + strandat 4544.645 kb on + strandat 4544.646 kb on - strandat 4544.647 kb on + strandat 4544.647 kb on + strandat 4544.647 kb on + strandat 4544.648 kb on - strandat 4544.669 kb on + strandat 4544.669 kb on + strandat 4544.669 kb on + strandat 4544.669 kb on + strandat 4544.723 kb on - strandat 4544.723 kb on - strandat 4544.747 kb on + strandat 4544.747 kb on + strandat 4544.764 kb on + strandat 4544.876 kb on - strand, within ECD_04266at 4544.909 kb on + strand, within ECD_04266at 4544.909 kb on + strand, within ECD_04266at 4544.909 kb on + strand, within ECD_04266at 4544.909 kb on + strand, within ECD_04266at 4544.909 kb on + strand, within ECD_04266at 4544.910 kb on - strand, within ECD_04266at 4544.910 kb on - strand, within ECD_04266at 4544.910 kb on - strand, within ECD_04266at 4544.910 kb on - strand, within ECD_04266at 4544.910 kb on - strand, within ECD_04266at 4544.910 kb on - strand, within ECD_04266at 4544.913 kb on + strand, within ECD_04266at 4544.913 kb on + strand, within ECD_04266at 4544.913 kb on + strand, within ECD_04266at 4544.913 kb on + strand, within ECD_04266at 4544.913 kb on + strand, within ECD_04266at 4544.914 kb on - strand, within ECD_04266at 4544.914 kb on - strand, within ECD_04266at 4545.066 kb on + strand, within ECD_04266at 4545.195 kb on + strand, within ECD_04266at 4545.225 kb on + strand, within ECD_04266at 4545.225 kb on + strand, within ECD_04266at 4545.225 kb on + strand, within ECD_04266at 4545.225 kb on + strand, within ECD_04266at 4545.226 kb on - strand, within ECD_04266at 4545.226 kb on - strand, within ECD_04266at 4545.227 kb on + strand, within ECD_04266at 4545.228 kb on - strand, within ECD_04266at 4545.228 kb on - strand, within ECD_04266at 4545.273 kb on - strand, within ECD_04266at 4545.330 kb on + strand, within ECD_04266at 4545.330 kb on + strand, within ECD_04266at 4545.330 kb on + strand, within ECD_04266at 4545.331 kb on - strand, within ECD_04266at 4545.332 kb on + strand, within ECD_04266at 4545.332 kb on + strand, within ECD_04266at 4545.333 kb on - strand, within ECD_04266at 4545.333 kb on - strand, within ECD_04266at 4545.333 kb on - strand, within ECD_04266at 4545.361 kb on + strand, within ECD_04266at 4545.361 kb on + strand, within ECD_04266at 4545.429 kb on - strand, within ECD_04266at 4545.468 kb on + strand, within ECD_04266at 4545.633 kb on + strand, within ECD_04266at 4545.840 kb on + strandat 4546.039 kb on + strandat 4546.039 kb on + strandat 4546.040 kb on - strandat 4546.050 kb on + strandat 4546.122 kb on + strandat 4546.123 kb on - strandat 4546.147 kb on - strandat 4546.210 kb on + strandat 4546.211 kb on - strandat 4546.279 kb on + strandat 4546.280 kb on - strandat 4546.302 kb on - strandat 4546.322 kb on + strandat 4546.359 kb on - strandat 4546.578 kb on - strand, within ECD_04267at 4546.597 kb on + strand, within ECD_04267at 4546.634 kb on + strand, within ECD_04267at 4546.886 kb on + strand, within ECD_04267

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1259
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4,543,722 + ECD_04265 0.33 -0.3
4,543,722 + ECD_04265 0.33 -1.3
4,543,722 + ECD_04265 0.33 -0.9
4,543,722 + ECD_04265 0.33 -1.3
4,543,722 + ECD_04265 0.33 +0.0
4,543,723 - ECD_04265 0.33 +0.7
4,543,723 - ECD_04265 0.33 -2.6
4,543,790 + ECD_04265 0.38 +0.0
4,543,790 + ECD_04265 0.38 +0.1
4,543,826 + ECD_04265 0.40 -0.2
4,543,826 + ECD_04265 0.40 -0.2
4,543,827 - ECD_04265 0.40 +0.4
4,543,827 - ECD_04265 0.40 -2.2
4,543,827 - ECD_04265 0.40 -1.3
4,543,873 + ECD_04265 0.44 -1.6
4,543,974 + ECD_04265 0.51 -0.7
4,543,975 - ECD_04265 0.51 -0.1
4,544,391 - ECD_04265 0.81 +1.0
4,544,645 + +0.9
4,544,645 + -0.3
4,544,645 + +0.5
4,544,645 + +0.4
4,544,646 - -1.9
4,544,647 + +0.7
4,544,647 + +0.4
4,544,647 + -0.6
4,544,648 - +0.2
4,544,669 + +0.0
4,544,669 + -0.1
4,544,669 + -0.3
4,544,669 + -0.5
4,544,723 - -0.8
4,544,723 - -0.4
4,544,747 + -0.7
4,544,747 + -0.6
4,544,764 + +0.4
4,544,876 - ECD_04266 0.17 -0.6
4,544,909 + ECD_04266 0.19 -0.5
4,544,909 + ECD_04266 0.19 -1.8
4,544,909 + ECD_04266 0.19 -0.4
4,544,909 + ECD_04266 0.19 -0.9
4,544,909 + ECD_04266 0.19 -0.8
4,544,910 - ECD_04266 0.19 +0.3
4,544,910 - ECD_04266 0.19 -1.9
4,544,910 - ECD_04266 0.19 -0.9
4,544,910 - ECD_04266 0.19 -0.1
4,544,910 - ECD_04266 0.19 +0.8
4,544,910 - ECD_04266 0.19 -1.1
4,544,913 + ECD_04266 0.20 +1.1
4,544,913 + ECD_04266 0.20 -1.3
4,544,913 + ECD_04266 0.20 -0.1
4,544,913 + ECD_04266 0.20 +0.3
4,544,913 + ECD_04266 0.20 +0.0
4,544,914 - ECD_04266 0.20 -0.6
4,544,914 - ECD_04266 0.20 -1.1
4,545,066 + ECD_04266 0.32 +0.1
4,545,195 + ECD_04266 0.43 -0.3
4,545,225 + ECD_04266 0.45 -0.4
4,545,225 + ECD_04266 0.45 +0.0
4,545,225 + ECD_04266 0.45 -1.1
4,545,225 + ECD_04266 0.45 -0.5
4,545,226 - ECD_04266 0.45 -1.0
4,545,226 - ECD_04266 0.45 -1.5
4,545,227 + ECD_04266 0.45 -0.4
4,545,228 - ECD_04266 0.45 -1.2
4,545,228 - ECD_04266 0.45 -0.6
4,545,273 - ECD_04266 0.49 -0.5
4,545,330 + ECD_04266 0.54 -0.2
4,545,330 + ECD_04266 0.54 -0.6
4,545,330 + ECD_04266 0.54 -0.1
4,545,331 - ECD_04266 0.54 -0.1
4,545,332 + ECD_04266 0.54 +0.0
4,545,332 + ECD_04266 0.54 -0.1
4,545,333 - ECD_04266 0.54 +0.6
4,545,333 - ECD_04266 0.54 +0.1
4,545,333 - ECD_04266 0.54 -0.6
4,545,361 + ECD_04266 0.56 +1.1
4,545,361 + ECD_04266 0.56 +0.1
4,545,429 - ECD_04266 0.62 -0.0
4,545,468 + ECD_04266 0.65 -0.7
4,545,633 + ECD_04266 0.78 +1.4
4,545,840 + -0.6
4,546,039 + +0.7
4,546,039 + -0.5
4,546,040 - -0.5
4,546,050 + +0.3
4,546,122 + -0.4
4,546,123 - +0.4
4,546,147 - +0.4
4,546,210 + +0.7
4,546,211 - +0.7
4,546,279 + +0.3
4,546,280 - +1.5
4,546,302 - +1.5
4,546,322 + +0.6
4,546,359 - +1.8
4,546,578 - ECD_04267 0.22 +1.9
4,546,597 + ECD_04267 0.23 +0.5
4,546,634 + ECD_04267 0.25 +0.5
4,546,886 + ECD_04267 0.41 -1.4

Or see this region's nucleotide sequence