Experiment: Laval1259
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03806 and ECD_03807 are separated by 211 nucleotides ECD_03807 and ECD_03808 are separated by 26 nucleotides ECD_03808 and ECD_03809 are separated by 4 nucleotides ECD_03809 and ECD_03810 are separated by 96 nucleotides
ECD_03806: ECD_03806 - DUF805 family putative inner membrane protein, at 4,020,237 to 4,020,677
_03806
ECD_03807: ECD_03807 - UPF0381 family protein, at 4,020,889 to 4,021,188
_03807
ECD_03808: ECD_03808 - stress-induced protein, at 4,021,215 to 4,021,643
_03808
ECD_03809: ECD_03809 - ferredoxin-NADP reductase; flavodoxin reductase, at 4,021,648 to 4,022,394
_03809
ECD_03810: ECD_03810 - fructose 1,6-bisphosphatase II, at 4,022,491 to 4,023,501
_03810
Position (kb)
4021
4022
4023 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4020.694 kb on + strand at 4020.719 kb on + strand at 4020.811 kb on + strand at 4020.812 kb on - strand at 4020.875 kb on + strand at 4020.875 kb on + strand at 4020.875 kb on + strand at 4020.876 kb on - strand at 4020.888 kb on + strand at 4020.902 kb on + strand at 4020.915 kb on + strand at 4020.919 kb on - strand, within ECD_03807 at 4020.966 kb on + strand, within ECD_03807 at 4020.966 kb on + strand, within ECD_03807 at 4020.967 kb on - strand, within ECD_03807 at 4021.081 kb on + strand, within ECD_03807 at 4021.082 kb on - strand, within ECD_03807 at 4021.084 kb on - strand, within ECD_03807 at 4021.156 kb on - strand, within ECD_03807 at 4021.156 kb on - strand, within ECD_03807 at 4021.166 kb on + strand at 4021.210 kb on + strand at 4021.210 kb on + strand at 4021.210 kb on + strand at 4021.211 kb on - strand at 4021.221 kb on + strand at 4021.221 kb on + strand at 4021.222 kb on - strand at 4021.222 kb on - strand at 4021.223 kb on + strand at 4021.277 kb on + strand, within ECD_03808 at 4021.322 kb on - strand, within ECD_03808 at 4021.329 kb on - strand, within ECD_03808 at 4021.342 kb on + strand, within ECD_03808 at 4021.385 kb on + strand, within ECD_03808 at 4021.386 kb on - strand, within ECD_03808 at 4021.425 kb on + strand, within ECD_03808 at 4021.426 kb on - strand, within ECD_03808 at 4021.428 kb on - strand, within ECD_03808 at 4021.428 kb on - strand, within ECD_03808 at 4021.560 kb on - strand, within ECD_03808 at 4021.598 kb on + strand, within ECD_03808 at 4021.598 kb on + strand, within ECD_03808 at 4021.598 kb on + strand, within ECD_03808 at 4021.637 kb on + strand at 4021.642 kb on - strand at 4021.656 kb on - strand at 4021.691 kb on - strand at 4021.734 kb on + strand, within ECD_03809 at 4021.734 kb on + strand, within ECD_03809 at 4021.785 kb on + strand, within ECD_03809 at 4021.943 kb on + strand, within ECD_03809 at 4021.948 kb on + strand, within ECD_03809 at 4021.948 kb on + strand, within ECD_03809 at 4021.949 kb on - strand, within ECD_03809 at 4021.949 kb on - strand, within ECD_03809 at 4021.949 kb on - strand, within ECD_03809 at 4021.962 kb on - strand, within ECD_03809 at 4022.002 kb on + strand, within ECD_03809 at 4022.014 kb on + strand, within ECD_03809 at 4022.015 kb on - strand, within ECD_03809 at 4022.033 kb on + strand, within ECD_03809 at 4022.034 kb on - strand, within ECD_03809 at 4022.034 kb on - strand, within ECD_03809 at 4022.050 kb on - strand, within ECD_03809 at 4022.069 kb on - strand, within ECD_03809 at 4022.069 kb on - strand, within ECD_03809 at 4022.087 kb on - strand, within ECD_03809 at 4022.122 kb on - strand, within ECD_03809 at 4022.171 kb on - strand, within ECD_03809 at 4022.171 kb on - strand, within ECD_03809 at 4022.230 kb on - strand, within ECD_03809 at 4022.230 kb on - strand, within ECD_03809 at 4022.230 kb on - strand, within ECD_03809 at 4022.234 kb on + strand, within ECD_03809 at 4022.234 kb on + strand, within ECD_03809 at 4022.235 kb on - strand, within ECD_03809 at 4022.235 kb on - strand, within ECD_03809 at 4022.235 kb on - strand, within ECD_03809 at 4022.240 kb on + strand, within ECD_03809 at 4022.240 kb on + strand, within ECD_03809 at 4022.335 kb on - strand at 4022.364 kb on + strand at 4022.424 kb on + strand at 4022.425 kb on - strand at 4022.534 kb on + strand at 4022.534 kb on + strand at 4022.534 kb on + strand at 4022.534 kb on + strand at 4022.646 kb on + strand, within ECD_03810 at 4022.704 kb on + strand, within ECD_03810 at 4022.705 kb on - strand, within ECD_03810 at 4022.705 kb on - strand, within ECD_03810 at 4022.705 kb on - strand, within ECD_03810 at 4022.770 kb on - strand, within ECD_03810 at 4022.830 kb on + strand, within ECD_03810 at 4022.830 kb on + strand, within ECD_03810 at 4022.831 kb on - strand, within ECD_03810 at 4022.831 kb on - strand, within ECD_03810 at 4022.831 kb on - strand, within ECD_03810 at 4022.831 kb on - strand, within ECD_03810 at 4022.831 kb on - strand, within ECD_03810 at 4022.886 kb on - strand, within ECD_03810 at 4022.913 kb on + strand, within ECD_03810 at 4022.953 kb on - strand, within ECD_03810 at 4022.959 kb on + strand, within ECD_03810 at 4022.960 kb on - strand, within ECD_03810 at 4022.965 kb on + strand, within ECD_03810 at 4023.012 kb on + strand, within ECD_03810 at 4023.144 kb on + strand, within ECD_03810 at 4023.145 kb on - strand, within ECD_03810 at 4023.145 kb on - strand, within ECD_03810 at 4023.145 kb on - strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.150 kb on + strand, within ECD_03810 at 4023.151 kb on - strand, within ECD_03810 at 4023.151 kb on - strand, within ECD_03810 at 4023.151 kb on - strand, within ECD_03810 at 4023.151 kb on - strand, within ECD_03810 at 4023.258 kb on + strand, within ECD_03810 at 4023.258 kb on + strand, within ECD_03810 at 4023.259 kb on - strand, within ECD_03810 at 4023.259 kb on - strand, within ECD_03810 at 4023.259 kb on - strand, within ECD_03810 at 4023.259 kb on - strand, within ECD_03810 at 4023.263 kb on - strand, within ECD_03810 at 4023.302 kb on + strand, within ECD_03810 at 4023.302 kb on + strand, within ECD_03810 at 4023.302 kb on + strand, within ECD_03810 at 4023.302 kb on + strand, within ECD_03810 at 4023.302 kb on + strand, within ECD_03810 at 4023.303 kb on - strand, within ECD_03810 at 4023.303 kb on - strand, within ECD_03810 at 4023.303 kb on - strand, within ECD_03810 at 4023.303 kb on - strand, within ECD_03810 at 4023.303 kb on - strand, within ECD_03810 at 4023.378 kb on + strand, within ECD_03810 at 4023.378 kb on + strand, within ECD_03810 at 4023.378 kb on + strand, within ECD_03810 at 4023.378 kb on + strand, within ECD_03810 at 4023.378 kb on + strand, within ECD_03810 at 4023.378 kb on + strand, within ECD_03810 at 4023.378 kb on + strand, within ECD_03810 at 4023.379 kb on - strand, within ECD_03810 at 4023.379 kb on - strand, within ECD_03810 at 4023.379 kb on - strand, within ECD_03810 at 4023.379 kb on - strand, within ECD_03810
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1259 remove 4,020,694 + +0.1 4,020,719 + -0.4 4,020,811 + -0.0 4,020,812 - +0.8 4,020,875 + +0.7 4,020,875 + -0.4 4,020,875 + -0.7 4,020,876 - -0.5 4,020,888 + -1.0 4,020,902 + -0.3 4,020,915 + +0.3 4,020,919 - ECD_03807 0.10 +0.5 4,020,966 + ECD_03807 0.26 +0.2 4,020,966 + ECD_03807 0.26 -1.4 4,020,967 - ECD_03807 0.26 +0.8 4,021,081 + ECD_03807 0.64 +0.1 4,021,082 - ECD_03807 0.64 -0.7 4,021,084 - ECD_03807 0.65 +1.3 4,021,156 - ECD_03807 0.89 +0.2 4,021,156 - ECD_03807 0.89 +0.2 4,021,166 + +0.8 4,021,210 + -1.0 4,021,210 + +0.3 4,021,210 + +0.4 4,021,211 - +0.6 4,021,221 + +0.0 4,021,221 + -0.0 4,021,222 - +0.1 4,021,222 - +0.4 4,021,223 + -0.4 4,021,277 + ECD_03808 0.14 +0.4 4,021,322 - ECD_03808 0.25 -0.3 4,021,329 - ECD_03808 0.27 +0.4 4,021,342 + ECD_03808 0.30 -0.7 4,021,385 + ECD_03808 0.40 +0.4 4,021,386 - ECD_03808 0.40 -0.2 4,021,425 + ECD_03808 0.49 -0.2 4,021,426 - ECD_03808 0.49 +1.1 4,021,428 - ECD_03808 0.50 +0.2 4,021,428 - ECD_03808 0.50 +0.2 4,021,560 - ECD_03808 0.80 -1.2 4,021,598 + ECD_03808 0.89 -0.7 4,021,598 + ECD_03808 0.89 +0.8 4,021,598 + ECD_03808 0.89 +0.1 4,021,637 + -0.7 4,021,642 - +0.5 4,021,656 - +0.3 4,021,691 - +0.5 4,021,734 + ECD_03809 0.12 +0.2 4,021,734 + ECD_03809 0.12 +0.8 4,021,785 + ECD_03809 0.18 +3.7 4,021,943 + ECD_03809 0.39 +0.6 4,021,948 + ECD_03809 0.40 -0.2 4,021,948 + ECD_03809 0.40 -0.4 4,021,949 - ECD_03809 0.40 -0.2 4,021,949 - ECD_03809 0.40 +0.1 4,021,949 - ECD_03809 0.40 -0.7 4,021,962 - ECD_03809 0.42 -0.1 4,022,002 + ECD_03809 0.47 +0.8 4,022,014 + ECD_03809 0.49 +0.4 4,022,015 - ECD_03809 0.49 +0.4 4,022,033 + ECD_03809 0.52 +0.7 4,022,034 - ECD_03809 0.52 -0.5 4,022,034 - ECD_03809 0.52 +0.3 4,022,050 - ECD_03809 0.54 +0.3 4,022,069 - ECD_03809 0.56 +1.7 4,022,069 - ECD_03809 0.56 +0.4 4,022,087 - ECD_03809 0.59 +0.2 4,022,122 - ECD_03809 0.63 +0.8 4,022,171 - ECD_03809 0.70 +1.0 4,022,171 - ECD_03809 0.70 +1.4 4,022,230 - ECD_03809 0.78 -1.0 4,022,230 - ECD_03809 0.78 +1.7 4,022,230 - ECD_03809 0.78 -0.3 4,022,234 + ECD_03809 0.78 -0.9 4,022,234 + ECD_03809 0.78 +0.2 4,022,235 - ECD_03809 0.79 +0.2 4,022,235 - ECD_03809 0.79 +1.0 4,022,235 - ECD_03809 0.79 -1.0 4,022,240 + ECD_03809 0.79 -0.9 4,022,240 + ECD_03809 0.79 -0.2 4,022,335 - +1.3 4,022,364 + +0.3 4,022,424 + -0.2 4,022,425 - -0.8 4,022,534 + +0.1 4,022,534 + +0.7 4,022,534 + +1.6 4,022,534 + -0.1 4,022,646 + ECD_03810 0.15 +0.5 4,022,704 + ECD_03810 0.21 -0.3 4,022,705 - ECD_03810 0.21 +1.0 4,022,705 - ECD_03810 0.21 -0.0 4,022,705 - ECD_03810 0.21 +0.0 4,022,770 - ECD_03810 0.28 -0.2 4,022,830 + ECD_03810 0.34 -0.1 4,022,830 + ECD_03810 0.34 +0.8 4,022,831 - ECD_03810 0.34 +0.4 4,022,831 - ECD_03810 0.34 -0.4 4,022,831 - ECD_03810 0.34 +0.1 4,022,831 - ECD_03810 0.34 +0.3 4,022,831 - ECD_03810 0.34 -0.1 4,022,886 - ECD_03810 0.39 -1.1 4,022,913 + ECD_03810 0.42 -0.1 4,022,953 - ECD_03810 0.46 -1.6 4,022,959 + ECD_03810 0.46 +1.2 4,022,960 - ECD_03810 0.46 -3.2 4,022,965 + ECD_03810 0.47 +0.5 4,023,012 + ECD_03810 0.52 -0.4 4,023,144 + ECD_03810 0.65 -0.2 4,023,145 - ECD_03810 0.65 +0.5 4,023,145 - ECD_03810 0.65 -2.4 4,023,145 - ECD_03810 0.65 +0.7 4,023,146 + ECD_03810 0.65 +0.1 4,023,146 + ECD_03810 0.65 -0.2 4,023,146 + ECD_03810 0.65 -0.4 4,023,146 + ECD_03810 0.65 +0.9 4,023,146 + ECD_03810 0.65 +0.4 4,023,146 + ECD_03810 0.65 +1.5 4,023,146 + ECD_03810 0.65 +0.6 4,023,146 + ECD_03810 0.65 -1.2 4,023,146 + ECD_03810 0.65 +0.2 4,023,146 + ECD_03810 0.65 +0.9 4,023,146 + ECD_03810 0.65 +0.1 4,023,146 + ECD_03810 0.65 -0.9 4,023,146 + ECD_03810 0.65 +1.3 4,023,146 + ECD_03810 0.65 -0.4 4,023,146 + ECD_03810 0.65 -0.7 4,023,146 + ECD_03810 0.65 +1.0 4,023,146 + ECD_03810 0.65 -0.2 4,023,146 + ECD_03810 0.65 +0.7 4,023,147 - ECD_03810 0.65 +0.5 4,023,147 - ECD_03810 0.65 +0.1 4,023,147 - ECD_03810 0.65 -0.0 4,023,147 - ECD_03810 0.65 +0.3 4,023,147 - ECD_03810 0.65 +0.4 4,023,147 - ECD_03810 0.65 +0.2 4,023,147 - ECD_03810 0.65 +0.4 4,023,147 - ECD_03810 0.65 -1.0 4,023,147 - ECD_03810 0.65 +0.2 4,023,147 - ECD_03810 0.65 +0.6 4,023,147 - ECD_03810 0.65 -0.4 4,023,147 - ECD_03810 0.65 -0.4 4,023,147 - ECD_03810 0.65 -0.2 4,023,147 - ECD_03810 0.65 -0.1 4,023,147 - ECD_03810 0.65 -0.3 4,023,147 - ECD_03810 0.65 +0.1 4,023,147 - ECD_03810 0.65 +1.0 4,023,147 - ECD_03810 0.65 +0.6 4,023,147 - ECD_03810 0.65 +1.1 4,023,147 - ECD_03810 0.65 +0.4 4,023,147 - ECD_03810 0.65 +0.4 4,023,150 + ECD_03810 0.65 +0.5 4,023,151 - ECD_03810 0.65 -0.5 4,023,151 - ECD_03810 0.65 -0.1 4,023,151 - ECD_03810 0.65 -0.0 4,023,151 - ECD_03810 0.65 +0.6 4,023,258 + ECD_03810 0.76 +0.0 4,023,258 + ECD_03810 0.76 +1.7 4,023,259 - ECD_03810 0.76 +0.8 4,023,259 - ECD_03810 0.76 +1.1 4,023,259 - ECD_03810 0.76 -0.9 4,023,259 - ECD_03810 0.76 +0.9 4,023,263 - ECD_03810 0.76 +0.3 4,023,302 + ECD_03810 0.80 +1.0 4,023,302 + ECD_03810 0.80 +0.4 4,023,302 + ECD_03810 0.80 -0.0 4,023,302 + ECD_03810 0.80 -0.0 4,023,302 + ECD_03810 0.80 +0.3 4,023,303 - ECD_03810 0.80 -0.4 4,023,303 - ECD_03810 0.80 +0.2 4,023,303 - ECD_03810 0.80 -0.3 4,023,303 - ECD_03810 0.80 -1.5 4,023,303 - ECD_03810 0.80 +0.1 4,023,378 + ECD_03810 0.88 +0.0 4,023,378 + ECD_03810 0.88 -0.1 4,023,378 + ECD_03810 0.88 +0.6 4,023,378 + ECD_03810 0.88 -0.1 4,023,378 + ECD_03810 0.88 +1.2 4,023,378 + ECD_03810 0.88 +0.0 4,023,378 + ECD_03810 0.88 +0.6 4,023,379 - ECD_03810 0.88 -2.4 4,023,379 - ECD_03810 0.88 -0.7 4,023,379 - ECD_03810 0.88 +0.5 4,023,379 - ECD_03810 0.88 +0.8
Or see this region's nucleotide sequence