Experiment: Laval1259
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03672 and ECD_03673 are separated by 2 nucleotides ECD_03673 and ECD_03674 are separated by 190 nucleotides
ECD_03672: ECD_03672 - putative ECA polysaccharide chain elongation protein, at 3,868,841 to 3,870,193
_03672
ECD_03673: ECD_03673 - UDP-N-acetyl-D-mannosaminuronic acid transferase, at 3,870,196 to 3,870,936
_03673
ECD_03674: ECD_03674 - putative APC family amino acid transporter, at 3,871,127 to 3,872,512
_03674
Position (kb)
3870
3871 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3870.120 kb on - strand at 3870.120 kb on - strand at 3870.151 kb on + strand at 3870.151 kb on + strand at 3870.151 kb on + strand at 3870.201 kb on + strand at 3870.223 kb on + strand at 3870.224 kb on - strand at 3870.224 kb on - strand at 3870.226 kb on - strand at 3870.239 kb on + strand at 3870.281 kb on - strand, within ECD_03673 at 3870.281 kb on - strand, within ECD_03673 at 3870.281 kb on - strand, within ECD_03673 at 3870.303 kb on + strand, within ECD_03673 at 3870.377 kb on + strand, within ECD_03673 at 3870.382 kb on - strand, within ECD_03673 at 3870.397 kb on - strand, within ECD_03673 at 3870.400 kb on + strand, within ECD_03673 at 3870.401 kb on - strand, within ECD_03673 at 3870.423 kb on - strand, within ECD_03673 at 3870.435 kb on + strand, within ECD_03673 at 3870.573 kb on + strand, within ECD_03673 at 3870.600 kb on + strand, within ECD_03673 at 3870.622 kb on + strand, within ECD_03673 at 3870.628 kb on - strand, within ECD_03673 at 3870.628 kb on - strand, within ECD_03673 at 3870.628 kb on - strand, within ECD_03673 at 3870.760 kb on + strand, within ECD_03673 at 3870.760 kb on + strand, within ECD_03673 at 3870.760 kb on + strand, within ECD_03673 at 3870.761 kb on - strand, within ECD_03673 at 3870.761 kb on - strand, within ECD_03673 at 3870.761 kb on - strand, within ECD_03673 at 3870.761 kb on - strand, within ECD_03673 at 3870.781 kb on + strand, within ECD_03673 at 3870.782 kb on - strand, within ECD_03673 at 3870.782 kb on - strand, within ECD_03673 at 3870.850 kb on + strand, within ECD_03673 at 3870.995 kb on + strand at 3871.016 kb on + strand at 3871.024 kb on + strand at 3871.024 kb on + strand at 3871.072 kb on - strand at 3871.072 kb on - strand at 3871.072 kb on - strand at 3871.136 kb on - strand at 3871.150 kb on - strand at 3871.174 kb on + strand at 3871.174 kb on + strand at 3871.220 kb on - strand at 3871.220 kb on - strand at 3871.260 kb on + strand at 3871.272 kb on - strand, within ECD_03674 at 3871.272 kb on - strand, within ECD_03674 at 3871.274 kb on - strand, within ECD_03674 at 3871.274 kb on - strand, within ECD_03674 at 3871.274 kb on - strand, within ECD_03674 at 3871.287 kb on + strand, within ECD_03674 at 3871.374 kb on - strand, within ECD_03674 at 3871.375 kb on + strand, within ECD_03674 at 3871.375 kb on + strand, within ECD_03674 at 3871.376 kb on - strand, within ECD_03674 at 3871.376 kb on - strand, within ECD_03674 at 3871.376 kb on - strand, within ECD_03674 at 3871.376 kb on - strand, within ECD_03674 at 3871.376 kb on - strand, within ECD_03674 at 3871.413 kb on - strand, within ECD_03674 at 3871.420 kb on + strand, within ECD_03674 at 3871.420 kb on + strand, within ECD_03674 at 3871.467 kb on - strand, within ECD_03674 at 3871.563 kb on - strand, within ECD_03674 at 3871.682 kb on - strand, within ECD_03674 at 3871.747 kb on + strand, within ECD_03674 at 3871.747 kb on + strand, within ECD_03674 at 3871.748 kb on - strand, within ECD_03674 at 3871.748 kb on - strand, within ECD_03674 at 3871.763 kb on + strand, within ECD_03674 at 3871.789 kb on + strand, within ECD_03674 at 3871.837 kb on - strand, within ECD_03674 at 3871.869 kb on - strand, within ECD_03674 at 3871.872 kb on + strand, within ECD_03674 at 3871.872 kb on + strand, within ECD_03674 at 3871.873 kb on - strand, within ECD_03674 at 3871.873 kb on - strand, within ECD_03674 at 3871.917 kb on + strand, within ECD_03674 at 3871.918 kb on - strand, within ECD_03674 at 3871.918 kb on - strand, within ECD_03674
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1259 remove 3,870,120 - +0.5 3,870,120 - +1.5 3,870,151 + +1.3 3,870,151 + -0.3 3,870,151 + -0.4 3,870,201 + +0.3 3,870,223 + +1.2 3,870,224 - +0.6 3,870,224 - +0.4 3,870,226 - -0.1 3,870,239 + +0.7 3,870,281 - ECD_03673 0.11 +2.0 3,870,281 - ECD_03673 0.11 +1.8 3,870,281 - ECD_03673 0.11 +0.6 3,870,303 + ECD_03673 0.14 -0.4 3,870,377 + ECD_03673 0.24 -1.1 3,870,382 - ECD_03673 0.25 +0.9 3,870,397 - ECD_03673 0.27 +0.4 3,870,400 + ECD_03673 0.28 +1.2 3,870,401 - ECD_03673 0.28 +1.6 3,870,423 - ECD_03673 0.31 +0.7 3,870,435 + ECD_03673 0.32 +0.5 3,870,573 + ECD_03673 0.51 +2.5 3,870,600 + ECD_03673 0.55 +0.9 3,870,622 + ECD_03673 0.57 +1.2 3,870,628 - ECD_03673 0.58 +0.6 3,870,628 - ECD_03673 0.58 +0.8 3,870,628 - ECD_03673 0.58 +1.3 3,870,760 + ECD_03673 0.76 +0.7 3,870,760 + ECD_03673 0.76 +0.2 3,870,760 + ECD_03673 0.76 +0.7 3,870,761 - ECD_03673 0.76 +0.6 3,870,761 - ECD_03673 0.76 +0.9 3,870,761 - ECD_03673 0.76 +0.9 3,870,761 - ECD_03673 0.76 +1.5 3,870,781 + ECD_03673 0.79 +0.5 3,870,782 - ECD_03673 0.79 +0.9 3,870,782 - ECD_03673 0.79 +0.1 3,870,850 + ECD_03673 0.88 -3.0 3,870,995 + +0.4 3,871,016 + +1.7 3,871,024 + +0.5 3,871,024 + +0.7 3,871,072 - +0.3 3,871,072 - -1.3 3,871,072 - -0.2 3,871,136 - +0.7 3,871,150 - -0.7 3,871,174 + +1.1 3,871,174 + -0.1 3,871,220 - +0.0 3,871,220 - +0.2 3,871,260 + +0.6 3,871,272 - ECD_03674 0.10 -0.3 3,871,272 - ECD_03674 0.10 +0.1 3,871,274 - ECD_03674 0.11 -0.2 3,871,274 - ECD_03674 0.11 -0.3 3,871,274 - ECD_03674 0.11 -0.1 3,871,287 + ECD_03674 0.12 +0.9 3,871,374 - ECD_03674 0.18 -0.5 3,871,375 + ECD_03674 0.18 +0.2 3,871,375 + ECD_03674 0.18 +0.1 3,871,376 - ECD_03674 0.18 +0.2 3,871,376 - ECD_03674 0.18 +0.3 3,871,376 - ECD_03674 0.18 +0.4 3,871,376 - ECD_03674 0.18 +0.2 3,871,376 - ECD_03674 0.18 +0.3 3,871,413 - ECD_03674 0.21 -0.1 3,871,420 + ECD_03674 0.21 -0.2 3,871,420 + ECD_03674 0.21 +0.4 3,871,467 - ECD_03674 0.25 -0.3 3,871,563 - ECD_03674 0.31 +0.9 3,871,682 - ECD_03674 0.40 -0.5 3,871,747 + ECD_03674 0.45 -0.6 3,871,747 + ECD_03674 0.45 -0.3 3,871,748 - ECD_03674 0.45 -2.1 3,871,748 - ECD_03674 0.45 +1.0 3,871,763 + ECD_03674 0.46 -0.1 3,871,789 + ECD_03674 0.48 -0.1 3,871,837 - ECD_03674 0.51 -0.8 3,871,869 - ECD_03674 0.54 -0.6 3,871,872 + ECD_03674 0.54 -0.1 3,871,872 + ECD_03674 0.54 -0.4 3,871,873 - ECD_03674 0.54 -0.4 3,871,873 - ECD_03674 0.54 +2.1 3,871,917 + ECD_03674 0.57 +0.3 3,871,918 - ECD_03674 0.57 +0.6 3,871,918 - ECD_03674 0.57 -0.9
Or see this region's nucleotide sequence