Experiment: Laval1259
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03294 and ECD_03295 are separated by 449 nucleotides ECD_03295 and ECD_03296 are separated by 37 nucleotides ECD_03296 and ECD_03297 are separated by 119 nucleotides ECD_03297 and ECD_03298 overlap by 14 nucleotides
ECD_03294: ECD_03294 - hypothetical protein, at 3,446,190 to 3,446,681
_03294
ECD_03295: ECD_03295 - stable heat shock chaperone, at 3,447,131 to 3,447,415
_03295
ECD_03296: ECD_03296 - gamma-glutamyltranspeptidase, at 3,447,453 to 3,449,195
_03296
ECD_03297: ECD_03297 - DUF2756 family protein, at 3,449,315 to 3,449,755
_03297
ECD_03298: ECD_03298 - glycerophosphodiester phosphodiesterase, cytosolic, at 3,449,742 to 3,450,485
_03298
Position (kb)
3447
3448
3449
3450 Strain fitness (log2 ratio)
-1
0
1 at 3447.202 kb on + strand, within ECD_03295 at 3447.203 kb on - strand, within ECD_03295 at 3447.207 kb on + strand, within ECD_03295 at 3447.234 kb on - strand, within ECD_03295 at 3447.307 kb on + strand, within ECD_03295 at 3447.380 kb on + strand, within ECD_03295 at 3447.421 kb on + strand at 3447.454 kb on + strand at 3447.539 kb on + strand at 3447.600 kb on - strand at 3447.776 kb on + strand, within ECD_03296 at 3447.912 kb on - strand, within ECD_03296 at 3447.914 kb on + strand, within ECD_03296 at 3447.914 kb on + strand, within ECD_03296 at 3447.971 kb on + strand, within ECD_03296 at 3447.971 kb on + strand, within ECD_03296 at 3447.973 kb on + strand, within ECD_03296 at 3448.015 kb on + strand, within ECD_03296 at 3448.023 kb on - strand, within ECD_03296 at 3448.032 kb on - strand, within ECD_03296 at 3448.032 kb on - strand, within ECD_03296 at 3448.128 kb on - strand, within ECD_03296 at 3448.177 kb on + strand, within ECD_03296 at 3448.202 kb on - strand, within ECD_03296 at 3448.293 kb on + strand, within ECD_03296 at 3448.294 kb on - strand, within ECD_03296 at 3448.334 kb on - strand, within ECD_03296 at 3448.386 kb on - strand, within ECD_03296 at 3448.466 kb on + strand, within ECD_03296 at 3448.468 kb on + strand, within ECD_03296 at 3448.468 kb on + strand, within ECD_03296 at 3448.468 kb on + strand, within ECD_03296 at 3448.580 kb on + strand, within ECD_03296 at 3448.580 kb on + strand, within ECD_03296 at 3448.616 kb on - strand, within ECD_03296 at 3448.616 kb on - strand, within ECD_03296 at 3448.714 kb on + strand, within ECD_03296 at 3448.715 kb on - strand, within ECD_03296 at 3448.715 kb on - strand, within ECD_03296 at 3448.718 kb on + strand, within ECD_03296 at 3448.719 kb on - strand, within ECD_03296 at 3448.823 kb on + strand, within ECD_03296 at 3449.046 kb on + strand at 3449.047 kb on - strand at 3449.095 kb on + strand at 3449.095 kb on + strand at 3449.096 kb on - strand at 3449.230 kb on + strand at 3449.230 kb on + strand at 3449.230 kb on + strand at 3449.231 kb on - strand at 3449.239 kb on + strand at 3449.241 kb on + strand at 3449.241 kb on + strand at 3449.241 kb on + strand at 3449.241 kb on + strand at 3449.241 kb on + strand at 3449.242 kb on - strand at 3449.242 kb on - strand at 3449.243 kb on + strand at 3449.243 kb on + strand at 3449.244 kb on - strand at 3449.244 kb on - strand at 3449.244 kb on - strand at 3449.244 kb on - strand at 3449.254 kb on + strand at 3449.254 kb on + strand at 3449.310 kb on - strand at 3449.374 kb on + strand, within ECD_03297 at 3449.375 kb on - strand, within ECD_03297 at 3449.375 kb on - strand, within ECD_03297 at 3449.377 kb on + strand, within ECD_03297 at 3449.533 kb on - strand, within ECD_03297 at 3449.539 kb on + strand, within ECD_03297 at 3449.540 kb on - strand, within ECD_03297 at 3449.540 kb on - strand, within ECD_03297 at 3449.648 kb on - strand, within ECD_03297 at 3449.668 kb on + strand, within ECD_03297 at 3449.668 kb on + strand, within ECD_03297 at 3449.668 kb on + strand, within ECD_03297 at 3449.669 kb on - strand, within ECD_03297 at 3449.669 kb on - strand, within ECD_03297 at 3449.786 kb on + strand at 3449.846 kb on + strand, within ECD_03298 at 3449.849 kb on - strand, within ECD_03298 at 3449.849 kb on - strand, within ECD_03298 at 3449.909 kb on + strand, within ECD_03298 at 3449.909 kb on + strand, within ECD_03298 at 3449.909 kb on + strand, within ECD_03298 at 3449.909 kb on + strand, within ECD_03298 at 3449.910 kb on - strand, within ECD_03298 at 3449.910 kb on - strand, within ECD_03298 at 3449.910 kb on - strand, within ECD_03298 at 3449.924 kb on + strand, within ECD_03298 at 3449.924 kb on + strand, within ECD_03298 at 3450.069 kb on - strand, within ECD_03298
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1259 remove 3,447,202 + ECD_03295 0.25 -0.7 3,447,203 - ECD_03295 0.25 +0.4 3,447,207 + ECD_03295 0.27 +0.6 3,447,234 - ECD_03295 0.36 +0.5 3,447,307 + ECD_03295 0.62 +0.5 3,447,380 + ECD_03295 0.87 -1.3 3,447,421 + +0.1 3,447,454 + -1.1 3,447,539 + +0.0 3,447,600 - -0.9 3,447,776 + ECD_03296 0.19 +0.5 3,447,912 - ECD_03296 0.26 -0.6 3,447,914 + ECD_03296 0.26 -1.7 3,447,914 + ECD_03296 0.26 +0.0 3,447,971 + ECD_03296 0.30 +0.2 3,447,971 + ECD_03296 0.30 -0.5 3,447,973 + ECD_03296 0.30 +0.1 3,448,015 + ECD_03296 0.32 -0.7 3,448,023 - ECD_03296 0.33 +0.4 3,448,032 - ECD_03296 0.33 +0.0 3,448,032 - ECD_03296 0.33 +0.2 3,448,128 - ECD_03296 0.39 -0.3 3,448,177 + ECD_03296 0.42 +1.2 3,448,202 - ECD_03296 0.43 +0.9 3,448,293 + ECD_03296 0.48 +0.7 3,448,294 - ECD_03296 0.48 +0.4 3,448,334 - ECD_03296 0.51 -1.1 3,448,386 - ECD_03296 0.54 +0.4 3,448,466 + ECD_03296 0.58 +0.5 3,448,468 + ECD_03296 0.58 +0.6 3,448,468 + ECD_03296 0.58 +0.0 3,448,468 + ECD_03296 0.58 +0.1 3,448,580 + ECD_03296 0.65 -0.1 3,448,580 + ECD_03296 0.65 +0.1 3,448,616 - ECD_03296 0.67 +0.0 3,448,616 - ECD_03296 0.67 +0.3 3,448,714 + ECD_03296 0.72 +1.7 3,448,715 - ECD_03296 0.72 +0.6 3,448,715 - ECD_03296 0.72 +1.7 3,448,718 + ECD_03296 0.73 +1.3 3,448,719 - ECD_03296 0.73 -0.1 3,448,823 + ECD_03296 0.79 +0.1 3,449,046 + +0.9 3,449,047 - +0.5 3,449,095 + +0.3 3,449,095 + +0.4 3,449,096 - -0.3 3,449,230 + +0.9 3,449,230 + -0.0 3,449,230 + -0.6 3,449,231 - -0.8 3,449,239 + +1.1 3,449,241 + +1.0 3,449,241 + +0.1 3,449,241 + -0.2 3,449,241 + -0.2 3,449,241 + -0.1 3,449,242 - -0.1 3,449,242 - +0.5 3,449,243 + -0.2 3,449,243 + -1.1 3,449,244 - +0.4 3,449,244 - +0.3 3,449,244 - +0.2 3,449,244 - +0.6 3,449,254 + +0.1 3,449,254 + -0.7 3,449,310 - +0.7 3,449,374 + ECD_03297 0.13 -1.4 3,449,375 - ECD_03297 0.14 +0.2 3,449,375 - ECD_03297 0.14 -0.1 3,449,377 + ECD_03297 0.14 -0.5 3,449,533 - ECD_03297 0.49 -0.7 3,449,539 + ECD_03297 0.51 +1.1 3,449,540 - ECD_03297 0.51 +0.4 3,449,540 - ECD_03297 0.51 -0.8 3,449,648 - ECD_03297 0.76 -0.3 3,449,668 + ECD_03297 0.80 -0.5 3,449,668 + ECD_03297 0.80 -0.7 3,449,668 + ECD_03297 0.80 +0.3 3,449,669 - ECD_03297 0.80 -0.1 3,449,669 - ECD_03297 0.80 -0.1 3,449,786 + -1.3 3,449,846 + ECD_03298 0.14 +0.8 3,449,849 - ECD_03298 0.14 -0.6 3,449,849 - ECD_03298 0.14 +1.4 3,449,909 + ECD_03298 0.22 -1.2 3,449,909 + ECD_03298 0.22 -0.3 3,449,909 + ECD_03298 0.22 +0.9 3,449,909 + ECD_03298 0.22 +0.5 3,449,910 - ECD_03298 0.23 +0.8 3,449,910 - ECD_03298 0.23 -1.2 3,449,910 - ECD_03298 0.23 +0.4 3,449,924 + ECD_03298 0.24 +0.0 3,449,924 + ECD_03298 0.24 -0.1 3,450,069 - ECD_03298 0.44 +0.4
Or see this region's nucleotide sequence