Experiment: Laval1259
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02768 and ECD_02769 are separated by 8 nucleotides ECD_02769 and ECD_02770 are separated by 135 nucleotides ECD_02770 and ECD_02771 overlap by 4 nucleotides ECD_02771 and ECD_02772 are separated by 55 nucleotides
ECD_02768: ECD_02768 - biosynthetic arginine decarboxylase, PLP-binding, at 2,914,793 to 2,916,769
_02768
ECD_02769: ECD_02769 - uncharacterized protein, at 2,916,778 to 2,916,909
_02769
ECD_02770: ECD_02770 - uncharacterized protein, at 2,917,045 to 2,917,260
_02770
ECD_02771: ECD_02771 - putative inner membrane protein, at 2,917,257 to 2,917,508
_02771
ECD_02772: ECD_02772 - S-adenosylmethionine synthetase, at 2,917,564 to 2,918,718
_02772
Position (kb)
2917
2918 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 2916.399 kb on + strand, within ECD_02768 at 2916.411 kb on + strand, within ECD_02768 at 2916.546 kb on - strand, within ECD_02768 at 2916.546 kb on - strand, within ECD_02768 at 2916.546 kb on - strand, within ECD_02768 at 2916.599 kb on - strand at 2916.627 kb on + strand at 2916.627 kb on + strand at 2916.627 kb on + strand at 2916.627 kb on + strand at 2916.628 kb on - strand at 2916.628 kb on - strand at 2916.628 kb on - strand at 2916.628 kb on - strand at 2916.628 kb on - strand at 2916.628 kb on - strand at 2916.628 kb on - strand at 2916.628 kb on - strand at 2916.628 kb on - strand at 2916.628 kb on - strand at 2916.628 kb on - strand at 2916.631 kb on + strand at 2916.632 kb on - strand at 2916.632 kb on - strand at 2916.650 kb on - strand at 2916.654 kb on + strand at 2916.655 kb on - strand at 2916.655 kb on - strand at 2916.655 kb on - strand at 2916.655 kb on - strand at 2916.714 kb on - strand at 2916.714 kb on - strand at 2916.714 kb on - strand at 2916.717 kb on - strand at 2916.717 kb on - strand at 2916.770 kb on - strand at 2916.785 kb on - strand at 2916.793 kb on - strand, within ECD_02769 at 2916.793 kb on - strand, within ECD_02769 at 2916.799 kb on - strand, within ECD_02769 at 2916.937 kb on - strand at 2916.937 kb on - strand at 2916.937 kb on - strand at 2916.980 kb on - strand at 2916.980 kb on - strand at 2917.013 kb on + strand at 2917.014 kb on - strand at 2917.050 kb on + strand at 2917.050 kb on + strand at 2917.051 kb on - strand at 2917.051 kb on - strand at 2917.051 kb on - strand at 2917.065 kb on + strand at 2917.147 kb on + strand, within ECD_02770 at 2917.148 kb on - strand, within ECD_02770 at 2917.148 kb on - strand, within ECD_02770 at 2917.148 kb on - strand, within ECD_02770 at 2917.155 kb on - strand, within ECD_02770 at 2917.155 kb on - strand, within ECD_02770 at 2917.177 kb on - strand, within ECD_02770 at 2917.278 kb on - strand at 2917.278 kb on - strand at 2917.278 kb on - strand at 2917.278 kb on - strand at 2917.278 kb on - strand at 2917.280 kb on - strand at 2917.309 kb on + strand, within ECD_02771 at 2917.310 kb on - strand, within ECD_02771 at 2917.395 kb on + strand, within ECD_02771 at 2917.395 kb on + strand, within ECD_02771 at 2917.451 kb on + strand, within ECD_02771 at 2917.493 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1259 remove 2,916,399 + ECD_02768 0.81 +0.9 2,916,411 + ECD_02768 0.82 +0.9 2,916,546 - ECD_02768 0.89 +2.1 2,916,546 - ECD_02768 0.89 +2.3 2,916,546 - ECD_02768 0.89 -0.1 2,916,599 - +1.6 2,916,627 + +0.3 2,916,627 + +1.7 2,916,627 + +0.8 2,916,627 + +1.4 2,916,628 - +1.8 2,916,628 - +1.6 2,916,628 - +2.4 2,916,628 - +1.9 2,916,628 - +0.9 2,916,628 - +1.4 2,916,628 - +2.0 2,916,628 - +1.3 2,916,628 - +1.5 2,916,628 - +2.3 2,916,628 - +1.5 2,916,631 + +1.4 2,916,632 - +1.2 2,916,632 - +0.3 2,916,650 - +0.6 2,916,654 + +4.4 2,916,655 - +1.4 2,916,655 - +1.6 2,916,655 - -1.6 2,916,655 - +1.2 2,916,714 - +1.5 2,916,714 - +2.2 2,916,714 - +2.0 2,916,717 - +0.7 2,916,717 - +1.0 2,916,770 - +0.9 2,916,785 - +0.4 2,916,793 - ECD_02769 0.11 -1.1 2,916,793 - ECD_02769 0.11 +2.2 2,916,799 - ECD_02769 0.16 -0.1 2,916,937 - -0.5 2,916,937 - +1.9 2,916,937 - -0.2 2,916,980 - +0.0 2,916,980 - +1.7 2,917,013 + +0.6 2,917,014 - +0.1 2,917,050 + +2.8 2,917,050 + -0.4 2,917,051 - +2.0 2,917,051 - -0.2 2,917,051 - -1.2 2,917,065 + +0.9 2,917,147 + ECD_02770 0.47 -0.3 2,917,148 - ECD_02770 0.48 +2.4 2,917,148 - ECD_02770 0.48 -0.1 2,917,148 - ECD_02770 0.48 +2.0 2,917,155 - ECD_02770 0.51 +2.2 2,917,155 - ECD_02770 0.51 -0.8 2,917,177 - ECD_02770 0.61 +1.0 2,917,278 - -0.1 2,917,278 - +1.2 2,917,278 - -1.3 2,917,278 - +1.4 2,917,278 - +0.2 2,917,280 - +0.4 2,917,309 + ECD_02771 0.21 +0.0 2,917,310 - ECD_02771 0.21 +0.2 2,917,395 + ECD_02771 0.55 -0.5 2,917,395 + ECD_02771 0.55 +2.1 2,917,451 + ECD_02771 0.77 -1.2 2,917,493 + +2.0
Or see this region's nucleotide sequence