Strain Fitness in Escherichia coli BL21 around ECD_02731

Experiment: Laval1259

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02730 and ECD_02731 are separated by 195 nucleotidesECD_02731 and ECD_02732 are separated by 163 nucleotidesECD_02732 and ECD_02733 are separated by 38 nucleotides ECD_02730: ECD_02730 - iron-sulfur cluster repair protein, plumbagin resistance, at 2,872,173 to 2,873,153 _02730 ECD_02731: ECD_02731 - hemolysin III family HylIII inner membrane protein, at 2,873,349 to 2,874,008 _02731 ECD_02732: ECD_02732 - UPF0267 family protein, at 2,874,172 to 2,874,483 _02732 ECD_02733: ECD_02733 - 6-phospho-beta-glucosidase A, at 2,874,522 to 2,875,961 _02733 Position (kb) 2873 2874 2875Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2873.111 kb on + strandat 2873.111 kb on + strandat 2873.112 kb on - strandat 2873.112 kb on - strandat 2873.151 kb on + strandat 2873.205 kb on + strandat 2873.205 kb on + strandat 2873.205 kb on + strandat 2873.205 kb on + strandat 2873.206 kb on - strandat 2873.206 kb on - strandat 2873.230 kb on + strandat 2873.254 kb on - strandat 2873.324 kb on + strandat 2873.343 kb on + strandat 2873.365 kb on + strandat 2873.365 kb on + strandat 2873.365 kb on + strandat 2873.365 kb on + strandat 2873.366 kb on - strandat 2873.366 kb on - strandat 2873.366 kb on - strandat 2873.366 kb on - strandat 2873.371 kb on + strandat 2873.371 kb on + strandat 2873.371 kb on + strandat 2873.371 kb on + strandat 2873.371 kb on + strandat 2873.371 kb on + strandat 2873.371 kb on + strandat 2873.372 kb on - strandat 2873.372 kb on - strandat 2873.372 kb on - strandat 2873.434 kb on + strand, within ECD_02731at 2873.435 kb on - strand, within ECD_02731at 2873.435 kb on - strand, within ECD_02731at 2873.435 kb on - strand, within ECD_02731at 2873.456 kb on - strand, within ECD_02731at 2873.456 kb on - strand, within ECD_02731at 2873.504 kb on + strand, within ECD_02731at 2873.504 kb on + strand, within ECD_02731at 2873.505 kb on - strand, within ECD_02731at 2873.539 kb on + strand, within ECD_02731at 2873.539 kb on + strand, within ECD_02731at 2873.540 kb on - strand, within ECD_02731at 2873.575 kb on + strand, within ECD_02731at 2873.575 kb on + strand, within ECD_02731at 2873.575 kb on + strand, within ECD_02731at 2873.576 kb on - strand, within ECD_02731at 2873.655 kb on - strand, within ECD_02731at 2873.713 kb on + strand, within ECD_02731at 2873.714 kb on - strand, within ECD_02731at 2873.714 kb on - strand, within ECD_02731at 2873.714 kb on - strand, within ECD_02731at 2873.734 kb on + strand, within ECD_02731at 2873.735 kb on - strand, within ECD_02731at 2873.739 kb on - strand, within ECD_02731at 2873.798 kb on - strand, within ECD_02731at 2873.828 kb on + strand, within ECD_02731at 2873.828 kb on + strand, within ECD_02731at 2873.828 kb on + strand, within ECD_02731at 2873.829 kb on - strand, within ECD_02731at 2873.829 kb on - strand, within ECD_02731at 2873.829 kb on - strand, within ECD_02731at 2873.849 kb on - strand, within ECD_02731at 2873.876 kb on + strand, within ECD_02731at 2873.898 kb on + strand, within ECD_02731at 2873.959 kb on - strandat 2873.959 kb on - strandat 2873.978 kb on - strandat 2874.009 kb on - strandat 2874.013 kb on + strandat 2874.014 kb on - strandat 2874.014 kb on - strandat 2874.029 kb on - strandat 2874.040 kb on + strandat 2874.040 kb on + strandat 2874.040 kb on + strandat 2874.040 kb on + strandat 2874.041 kb on - strandat 2874.041 kb on - strandat 2874.041 kb on - strandat 2874.041 kb on - strandat 2874.041 kb on - strandat 2874.041 kb on - strandat 2874.041 kb on - strandat 2874.041 kb on - strandat 2874.041 kb on - strandat 2874.041 kb on - strandat 2874.041 kb on - strandat 2874.041 kb on - strandat 2874.041 kb on - strandat 2874.041 kb on - strandat 2874.041 kb on - strandat 2874.041 kb on - strandat 2874.041 kb on - strandat 2874.041 kb on - strandat 2874.041 kb on - strandat 2874.041 kb on - strandat 2874.041 kb on - strandat 2874.041 kb on - strandat 2874.041 kb on - strandat 2874.041 kb on - strandat 2874.042 kb on + strandat 2874.042 kb on + strandat 2874.042 kb on + strandat 2874.042 kb on + strandat 2874.043 kb on - strandat 2874.043 kb on - strandat 2874.043 kb on - strandat 2874.043 kb on - strandat 2874.043 kb on - strandat 2874.043 kb on - strandat 2874.218 kb on + strand, within ECD_02732at 2874.239 kb on - strand, within ECD_02732at 2874.423 kb on + strand, within ECD_02732at 2874.487 kb on - strandat 2874.487 kb on - strandat 2874.489 kb on + strandat 2874.489 kb on + strandat 2874.489 kb on + strandat 2874.490 kb on - strandat 2874.521 kb on + strandat 2874.521 kb on + strandat 2874.522 kb on - strandat 2874.522 kb on - strandat 2874.527 kb on - strandat 2874.559 kb on + strandat 2874.738 kb on + strand, within ECD_02733at 2874.739 kb on - strand, within ECD_02733at 2874.758 kb on - strand, within ECD_02733at 2874.861 kb on + strand, within ECD_02733at 2874.861 kb on + strand, within ECD_02733at 2874.861 kb on + strand, within ECD_02733at 2874.862 kb on - strand, within ECD_02733at 2874.869 kb on + strand, within ECD_02733at 2874.869 kb on + strand, within ECD_02733at 2874.869 kb on + strand, within ECD_02733at 2874.869 kb on + strand, within ECD_02733at 2874.869 kb on + strand, within ECD_02733at 2874.870 kb on - strand, within ECD_02733at 2874.870 kb on - strand, within ECD_02733at 2874.870 kb on - strand, within ECD_02733at 2874.892 kb on - strand, within ECD_02733at 2874.954 kb on + strand, within ECD_02733at 2874.954 kb on + strand, within ECD_02733at 2874.954 kb on + strand, within ECD_02733at 2874.974 kb on + strand, within ECD_02733

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1259
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2,873,111 + -0.9
2,873,111 + -1.7
2,873,112 - +1.8
2,873,112 - -0.0
2,873,151 + -0.3
2,873,205 + -1.8
2,873,205 + -1.8
2,873,205 + +0.1
2,873,205 + +0.7
2,873,206 - -0.8
2,873,206 - +1.0
2,873,230 + +0.4
2,873,254 - +0.6
2,873,324 + +0.2
2,873,343 + +1.5
2,873,365 + -0.2
2,873,365 + +0.1
2,873,365 + +1.4
2,873,365 + +1.2
2,873,366 - +1.9
2,873,366 - -2.1
2,873,366 - +0.2
2,873,366 - -0.4
2,873,371 + -1.6
2,873,371 + -0.2
2,873,371 + -1.3
2,873,371 + -2.1
2,873,371 + +2.2
2,873,371 + -0.6
2,873,371 + -1.0
2,873,372 - -0.9
2,873,372 - -0.9
2,873,372 - -1.2
2,873,434 + ECD_02731 0.13 +2.1
2,873,435 - ECD_02731 0.13 -0.1
2,873,435 - ECD_02731 0.13 -0.9
2,873,435 - ECD_02731 0.13 +0.4
2,873,456 - ECD_02731 0.16 +1.6
2,873,456 - ECD_02731 0.16 -1.1
2,873,504 + ECD_02731 0.23 +2.2
2,873,504 + ECD_02731 0.23 +0.3
2,873,505 - ECD_02731 0.24 -0.2
2,873,539 + ECD_02731 0.29 -0.4
2,873,539 + ECD_02731 0.29 +0.1
2,873,540 - ECD_02731 0.29 -0.5
2,873,575 + ECD_02731 0.34 +2.0
2,873,575 + ECD_02731 0.34 -1.4
2,873,575 + ECD_02731 0.34 -0.1
2,873,576 - ECD_02731 0.34 +2.5
2,873,655 - ECD_02731 0.46 +1.8
2,873,713 + ECD_02731 0.55 +3.1
2,873,714 - ECD_02731 0.55 +2.4
2,873,714 - ECD_02731 0.55 +0.1
2,873,714 - ECD_02731 0.55 -1.4
2,873,734 + ECD_02731 0.58 -0.8
2,873,735 - ECD_02731 0.58 +0.2
2,873,739 - ECD_02731 0.59 -0.7
2,873,798 - ECD_02731 0.68 +0.6
2,873,828 + ECD_02731 0.73 +1.7
2,873,828 + ECD_02731 0.73 -1.8
2,873,828 + ECD_02731 0.73 +0.2
2,873,829 - ECD_02731 0.73 -0.3
2,873,829 - ECD_02731 0.73 +1.8
2,873,829 - ECD_02731 0.73 +0.6
2,873,849 - ECD_02731 0.76 -0.3
2,873,876 + ECD_02731 0.80 -0.3
2,873,898 + ECD_02731 0.83 -2.3
2,873,959 - +1.5
2,873,959 - -0.5
2,873,978 - +0.4
2,874,009 - +0.0
2,874,013 + -1.3
2,874,014 - -2.2
2,874,014 - -1.2
2,874,029 - -0.8
2,874,040 + +0.1
2,874,040 + +0.0
2,874,040 + -0.4
2,874,040 + -0.8
2,874,041 - -0.3
2,874,041 - +0.2
2,874,041 - -0.8
2,874,041 - -0.5
2,874,041 - +1.5
2,874,041 - -1.4
2,874,041 - +0.1
2,874,041 - -0.5
2,874,041 - -1.1
2,874,041 - -0.6
2,874,041 - -1.1
2,874,041 - -0.2
2,874,041 - -0.8
2,874,041 - -1.3
2,874,041 - -0.2
2,874,041 - -1.7
2,874,041 - +2.7
2,874,041 - -0.6
2,874,041 - +1.2
2,874,041 - -1.1
2,874,041 - -0.5
2,874,041 - +0.7
2,874,041 - -1.1
2,874,041 - -0.3
2,874,042 + -1.4
2,874,042 + +0.2
2,874,042 + +1.3
2,874,042 + -1.7
2,874,043 - -1.0
2,874,043 - -1.2
2,874,043 - +0.0
2,874,043 - -0.8
2,874,043 - +0.1
2,874,043 - +1.4
2,874,218 + ECD_02732 0.15 -0.2
2,874,239 - ECD_02732 0.21 -0.3
2,874,423 + ECD_02732 0.80 +0.0
2,874,487 - +0.2
2,874,487 - -0.8
2,874,489 + -2.1
2,874,489 + +0.2
2,874,489 + -0.4
2,874,490 - -1.0
2,874,521 + -1.9
2,874,521 + -0.9
2,874,522 - -0.3
2,874,522 - -1.7
2,874,527 - -0.2
2,874,559 + -0.7
2,874,738 + ECD_02733 0.15 +1.6
2,874,739 - ECD_02733 0.15 -0.7
2,874,758 - ECD_02733 0.16 +0.1
2,874,861 + ECD_02733 0.24 +2.2
2,874,861 + ECD_02733 0.24 +0.9
2,874,861 + ECD_02733 0.24 -0.5
2,874,862 - ECD_02733 0.24 -1.6
2,874,869 + ECD_02733 0.24 -1.0
2,874,869 + ECD_02733 0.24 -1.2
2,874,869 + ECD_02733 0.24 -0.3
2,874,869 + ECD_02733 0.24 -0.9
2,874,869 + ECD_02733 0.24 -0.9
2,874,870 - ECD_02733 0.24 -2.0
2,874,870 - ECD_02733 0.24 -2.6
2,874,870 - ECD_02733 0.24 +0.0
2,874,892 - ECD_02733 0.26 +2.1
2,874,954 + ECD_02733 0.30 -0.2
2,874,954 + ECD_02733 0.30 -0.2
2,874,954 + ECD_02733 0.30 -0.2
2,874,974 + ECD_02733 0.31 -0.3

Or see this region's nucleotide sequence