Experiment: Laval1259
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02730 and ECD_02731 are separated by 195 nucleotides ECD_02731 and ECD_02732 are separated by 163 nucleotides ECD_02732 and ECD_02733 are separated by 38 nucleotides
ECD_02730: ECD_02730 - iron-sulfur cluster repair protein, plumbagin resistance, at 2,872,173 to 2,873,153
_02730
ECD_02731: ECD_02731 - hemolysin III family HylIII inner membrane protein, at 2,873,349 to 2,874,008
_02731
ECD_02732: ECD_02732 - UPF0267 family protein, at 2,874,172 to 2,874,483
_02732
ECD_02733: ECD_02733 - 6-phospho-beta-glucosidase A, at 2,874,522 to 2,875,961
_02733
Position (kb)
2873
2874
2875 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2873.111 kb on + strand at 2873.111 kb on + strand at 2873.112 kb on - strand at 2873.112 kb on - strand at 2873.151 kb on + strand at 2873.205 kb on + strand at 2873.205 kb on + strand at 2873.205 kb on + strand at 2873.205 kb on + strand at 2873.206 kb on - strand at 2873.206 kb on - strand at 2873.230 kb on + strand at 2873.254 kb on - strand at 2873.324 kb on + strand at 2873.343 kb on + strand at 2873.365 kb on + strand at 2873.365 kb on + strand at 2873.365 kb on + strand at 2873.365 kb on + strand at 2873.366 kb on - strand at 2873.366 kb on - strand at 2873.366 kb on - strand at 2873.366 kb on - strand at 2873.371 kb on + strand at 2873.371 kb on + strand at 2873.371 kb on + strand at 2873.371 kb on + strand at 2873.371 kb on + strand at 2873.371 kb on + strand at 2873.371 kb on + strand at 2873.372 kb on - strand at 2873.372 kb on - strand at 2873.372 kb on - strand at 2873.434 kb on + strand, within ECD_02731 at 2873.435 kb on - strand, within ECD_02731 at 2873.435 kb on - strand, within ECD_02731 at 2873.435 kb on - strand, within ECD_02731 at 2873.456 kb on - strand, within ECD_02731 at 2873.456 kb on - strand, within ECD_02731 at 2873.504 kb on + strand, within ECD_02731 at 2873.504 kb on + strand, within ECD_02731 at 2873.505 kb on - strand, within ECD_02731 at 2873.539 kb on + strand, within ECD_02731 at 2873.539 kb on + strand, within ECD_02731 at 2873.540 kb on - strand, within ECD_02731 at 2873.575 kb on + strand, within ECD_02731 at 2873.575 kb on + strand, within ECD_02731 at 2873.575 kb on + strand, within ECD_02731 at 2873.576 kb on - strand, within ECD_02731 at 2873.655 kb on - strand, within ECD_02731 at 2873.713 kb on + strand, within ECD_02731 at 2873.714 kb on - strand, within ECD_02731 at 2873.714 kb on - strand, within ECD_02731 at 2873.714 kb on - strand, within ECD_02731 at 2873.734 kb on + strand, within ECD_02731 at 2873.735 kb on - strand, within ECD_02731 at 2873.739 kb on - strand, within ECD_02731 at 2873.798 kb on - strand, within ECD_02731 at 2873.828 kb on + strand, within ECD_02731 at 2873.828 kb on + strand, within ECD_02731 at 2873.828 kb on + strand, within ECD_02731 at 2873.829 kb on - strand, within ECD_02731 at 2873.829 kb on - strand, within ECD_02731 at 2873.829 kb on - strand, within ECD_02731 at 2873.849 kb on - strand, within ECD_02731 at 2873.876 kb on + strand, within ECD_02731 at 2873.898 kb on + strand, within ECD_02731 at 2873.959 kb on - strand at 2873.959 kb on - strand at 2873.978 kb on - strand at 2874.009 kb on - strand at 2874.013 kb on + strand at 2874.014 kb on - strand at 2874.014 kb on - strand at 2874.029 kb on - strand at 2874.040 kb on + strand at 2874.040 kb on + strand at 2874.040 kb on + strand at 2874.040 kb on + strand at 2874.041 kb on - strand at 2874.041 kb on - strand at 2874.041 kb on - strand at 2874.041 kb on - strand at 2874.041 kb on - strand at 2874.041 kb on - strand at 2874.041 kb on - strand at 2874.041 kb on - strand at 2874.041 kb on - strand at 2874.041 kb on - strand at 2874.041 kb on - strand at 2874.041 kb on - strand at 2874.041 kb on - strand at 2874.041 kb on - strand at 2874.041 kb on - strand at 2874.041 kb on - strand at 2874.041 kb on - strand at 2874.041 kb on - strand at 2874.041 kb on - strand at 2874.041 kb on - strand at 2874.041 kb on - strand at 2874.041 kb on - strand at 2874.041 kb on - strand at 2874.041 kb on - strand at 2874.042 kb on + strand at 2874.042 kb on + strand at 2874.042 kb on + strand at 2874.042 kb on + strand at 2874.043 kb on - strand at 2874.043 kb on - strand at 2874.043 kb on - strand at 2874.043 kb on - strand at 2874.043 kb on - strand at 2874.043 kb on - strand at 2874.218 kb on + strand, within ECD_02732 at 2874.239 kb on - strand, within ECD_02732 at 2874.423 kb on + strand, within ECD_02732 at 2874.487 kb on - strand at 2874.487 kb on - strand at 2874.489 kb on + strand at 2874.489 kb on + strand at 2874.489 kb on + strand at 2874.490 kb on - strand at 2874.521 kb on + strand at 2874.521 kb on + strand at 2874.522 kb on - strand at 2874.522 kb on - strand at 2874.527 kb on - strand at 2874.559 kb on + strand at 2874.738 kb on + strand, within ECD_02733 at 2874.739 kb on - strand, within ECD_02733 at 2874.758 kb on - strand, within ECD_02733 at 2874.861 kb on + strand, within ECD_02733 at 2874.861 kb on + strand, within ECD_02733 at 2874.861 kb on + strand, within ECD_02733 at 2874.862 kb on - strand, within ECD_02733 at 2874.869 kb on + strand, within ECD_02733 at 2874.869 kb on + strand, within ECD_02733 at 2874.869 kb on + strand, within ECD_02733 at 2874.869 kb on + strand, within ECD_02733 at 2874.869 kb on + strand, within ECD_02733 at 2874.870 kb on - strand, within ECD_02733 at 2874.870 kb on - strand, within ECD_02733 at 2874.870 kb on - strand, within ECD_02733 at 2874.892 kb on - strand, within ECD_02733 at 2874.954 kb on + strand, within ECD_02733 at 2874.954 kb on + strand, within ECD_02733 at 2874.954 kb on + strand, within ECD_02733 at 2874.974 kb on + strand, within ECD_02733
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1259 remove 2,873,111 + -0.9 2,873,111 + -1.7 2,873,112 - +1.8 2,873,112 - -0.0 2,873,151 + -0.3 2,873,205 + -1.8 2,873,205 + -1.8 2,873,205 + +0.1 2,873,205 + +0.7 2,873,206 - -0.8 2,873,206 - +1.0 2,873,230 + +0.4 2,873,254 - +0.6 2,873,324 + +0.2 2,873,343 + +1.5 2,873,365 + -0.2 2,873,365 + +0.1 2,873,365 + +1.4 2,873,365 + +1.2 2,873,366 - +1.9 2,873,366 - -2.1 2,873,366 - +0.2 2,873,366 - -0.4 2,873,371 + -1.6 2,873,371 + -0.2 2,873,371 + -1.3 2,873,371 + -2.1 2,873,371 + +2.2 2,873,371 + -0.6 2,873,371 + -1.0 2,873,372 - -0.9 2,873,372 - -0.9 2,873,372 - -1.2 2,873,434 + ECD_02731 0.13 +2.1 2,873,435 - ECD_02731 0.13 -0.1 2,873,435 - ECD_02731 0.13 -0.9 2,873,435 - ECD_02731 0.13 +0.4 2,873,456 - ECD_02731 0.16 +1.6 2,873,456 - ECD_02731 0.16 -1.1 2,873,504 + ECD_02731 0.23 +2.2 2,873,504 + ECD_02731 0.23 +0.3 2,873,505 - ECD_02731 0.24 -0.2 2,873,539 + ECD_02731 0.29 -0.4 2,873,539 + ECD_02731 0.29 +0.1 2,873,540 - ECD_02731 0.29 -0.5 2,873,575 + ECD_02731 0.34 +2.0 2,873,575 + ECD_02731 0.34 -1.4 2,873,575 + ECD_02731 0.34 -0.1 2,873,576 - ECD_02731 0.34 +2.5 2,873,655 - ECD_02731 0.46 +1.8 2,873,713 + ECD_02731 0.55 +3.1 2,873,714 - ECD_02731 0.55 +2.4 2,873,714 - ECD_02731 0.55 +0.1 2,873,714 - ECD_02731 0.55 -1.4 2,873,734 + ECD_02731 0.58 -0.8 2,873,735 - ECD_02731 0.58 +0.2 2,873,739 - ECD_02731 0.59 -0.7 2,873,798 - ECD_02731 0.68 +0.6 2,873,828 + ECD_02731 0.73 +1.7 2,873,828 + ECD_02731 0.73 -1.8 2,873,828 + ECD_02731 0.73 +0.2 2,873,829 - ECD_02731 0.73 -0.3 2,873,829 - ECD_02731 0.73 +1.8 2,873,829 - ECD_02731 0.73 +0.6 2,873,849 - ECD_02731 0.76 -0.3 2,873,876 + ECD_02731 0.80 -0.3 2,873,898 + ECD_02731 0.83 -2.3 2,873,959 - +1.5 2,873,959 - -0.5 2,873,978 - +0.4 2,874,009 - +0.0 2,874,013 + -1.3 2,874,014 - -2.2 2,874,014 - -1.2 2,874,029 - -0.8 2,874,040 + +0.1 2,874,040 + +0.0 2,874,040 + -0.4 2,874,040 + -0.8 2,874,041 - -0.3 2,874,041 - +0.2 2,874,041 - -0.8 2,874,041 - -0.5 2,874,041 - +1.5 2,874,041 - -1.4 2,874,041 - +0.1 2,874,041 - -0.5 2,874,041 - -1.1 2,874,041 - -0.6 2,874,041 - -1.1 2,874,041 - -0.2 2,874,041 - -0.8 2,874,041 - -1.3 2,874,041 - -0.2 2,874,041 - -1.7 2,874,041 - +2.7 2,874,041 - -0.6 2,874,041 - +1.2 2,874,041 - -1.1 2,874,041 - -0.5 2,874,041 - +0.7 2,874,041 - -1.1 2,874,041 - -0.3 2,874,042 + -1.4 2,874,042 + +0.2 2,874,042 + +1.3 2,874,042 + -1.7 2,874,043 - -1.0 2,874,043 - -1.2 2,874,043 - +0.0 2,874,043 - -0.8 2,874,043 - +0.1 2,874,043 - +1.4 2,874,218 + ECD_02732 0.15 -0.2 2,874,239 - ECD_02732 0.21 -0.3 2,874,423 + ECD_02732 0.80 +0.0 2,874,487 - +0.2 2,874,487 - -0.8 2,874,489 + -2.1 2,874,489 + +0.2 2,874,489 + -0.4 2,874,490 - -1.0 2,874,521 + -1.9 2,874,521 + -0.9 2,874,522 - -0.3 2,874,522 - -1.7 2,874,527 - -0.2 2,874,559 + -0.7 2,874,738 + ECD_02733 0.15 +1.6 2,874,739 - ECD_02733 0.15 -0.7 2,874,758 - ECD_02733 0.16 +0.1 2,874,861 + ECD_02733 0.24 +2.2 2,874,861 + ECD_02733 0.24 +0.9 2,874,861 + ECD_02733 0.24 -0.5 2,874,862 - ECD_02733 0.24 -1.6 2,874,869 + ECD_02733 0.24 -1.0 2,874,869 + ECD_02733 0.24 -1.2 2,874,869 + ECD_02733 0.24 -0.3 2,874,869 + ECD_02733 0.24 -0.9 2,874,869 + ECD_02733 0.24 -0.9 2,874,870 - ECD_02733 0.24 -2.0 2,874,870 - ECD_02733 0.24 -2.6 2,874,870 - ECD_02733 0.24 +0.0 2,874,892 - ECD_02733 0.26 +2.1 2,874,954 + ECD_02733 0.30 -0.2 2,874,954 + ECD_02733 0.30 -0.2 2,874,954 + ECD_02733 0.30 -0.2 2,874,974 + ECD_02733 0.31 -0.3
Or see this region's nucleotide sequence