Experiment: Laval1259
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02693 and ECD_02694 are separated by 459 nucleotides ECD_02694 and ECD_02695 are separated by 37 nucleotides ECD_02695 and ECD_02696 are separated by 56 nucleotides
ECD_02693: ECD_02693 - putative transporter, at 2,825,576 to 2,826,805
_02693
ECD_02694: ECD_02694 - putative LuxR family transcriptional regulator, at 2,827,265 to 2,827,834
_02694
ECD_02695: ECD_02695 - putative transposase-related protein, at 2,827,872 to 2,828,180
_02695
ECD_02696: ECD_02696 - putative transposase for IS3, at 2,828,237 to 2,829,043
_02696
Position (kb)
2827
2828 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2826.303 kb on + strand, within ECD_02693 at 2826.303 kb on + strand, within ECD_02693 at 2826.304 kb on - strand, within ECD_02693 at 2826.304 kb on - strand, within ECD_02693 at 2826.353 kb on + strand, within ECD_02693 at 2826.403 kb on + strand, within ECD_02693 at 2826.403 kb on + strand, within ECD_02693 at 2826.445 kb on + strand, within ECD_02693 at 2826.456 kb on + strand, within ECD_02693 at 2826.488 kb on + strand, within ECD_02693 at 2826.534 kb on + strand, within ECD_02693 at 2826.569 kb on - strand, within ECD_02693 at 2826.580 kb on - strand, within ECD_02693 at 2826.586 kb on + strand, within ECD_02693 at 2826.586 kb on + strand, within ECD_02693 at 2826.587 kb on - strand, within ECD_02693 at 2826.587 kb on - strand, within ECD_02693 at 2826.587 kb on - strand, within ECD_02693 at 2826.605 kb on - strand, within ECD_02693 at 2826.651 kb on - strand, within ECD_02693 at 2826.681 kb on + strand, within ECD_02693 at 2826.681 kb on + strand, within ECD_02693 at 2826.698 kb on - strand at 2826.800 kb on - strand at 2826.807 kb on - strand at 2826.807 kb on - strand at 2826.954 kb on - strand at 2826.958 kb on - strand at 2826.958 kb on - strand at 2827.242 kb on - strand at 2827.526 kb on + strand, within ECD_02694 at 2827.815 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1259 remove 2,826,303 + ECD_02693 0.59 +1.8 2,826,303 + ECD_02693 0.59 -0.8 2,826,304 - ECD_02693 0.59 -0.9 2,826,304 - ECD_02693 0.59 +0.5 2,826,353 + ECD_02693 0.63 +0.1 2,826,403 + ECD_02693 0.67 +0.2 2,826,403 + ECD_02693 0.67 -0.1 2,826,445 + ECD_02693 0.71 -0.4 2,826,456 + ECD_02693 0.72 +0.8 2,826,488 + ECD_02693 0.74 -0.5 2,826,534 + ECD_02693 0.78 -0.6 2,826,569 - ECD_02693 0.81 +0.6 2,826,580 - ECD_02693 0.82 -1.2 2,826,586 + ECD_02693 0.82 -1.8 2,826,586 + ECD_02693 0.82 -0.8 2,826,587 - ECD_02693 0.82 -0.8 2,826,587 - ECD_02693 0.82 -2.4 2,826,587 - ECD_02693 0.82 +0.7 2,826,605 - ECD_02693 0.84 -0.4 2,826,651 - ECD_02693 0.87 -2.8 2,826,681 + ECD_02693 0.90 -0.5 2,826,681 + ECD_02693 0.90 -1.0 2,826,698 - +2.2 2,826,800 - -0.6 2,826,807 - +1.9 2,826,807 - +2.5 2,826,954 - -0.7 2,826,958 - +0.5 2,826,958 - -1.2 2,827,242 - -1.3 2,827,526 + ECD_02694 0.46 -0.8 2,827,815 - +0.3
Or see this region's nucleotide sequence