Strain Fitness in Escherichia coli BL21 around ECD_02325

Experiment: Laval1259

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02323 and ECD_02324 overlap by 1 nucleotidesECD_02324 and ECD_02325 overlap by 1 nucleotidesECD_02325 and ECD_02326 are separated by 303 nucleotides ECD_02323: ECD_02323 - sulfate/thiosulfate ABC transporter permease, at 2,413,207 to 2,414,082 _02323 ECD_02324: ECD_02324 - sulfate/thiosulfate ABC transporter permease, at 2,414,082 to 2,414,915 _02324 ECD_02325: ECD_02325 - thiosulfate-binding protein, at 2,414,915 to 2,415,931 _02325 ECD_02326: ECD_02326 - furfural resistance protein, putative short-chain oxidoreductase, at 2,416,235 to 2,417,026 _02326 Position (kb) 2414 2415 2416Strain fitness (log2 ratio) -2 -1 0 1at 2413.965 kb on - strand, within ECD_02323at 2414.092 kb on - strandat 2414.092 kb on - strandat 2414.127 kb on - strandat 2414.265 kb on - strand, within ECD_02324at 2414.419 kb on - strand, within ECD_02324at 2414.777 kb on - strand, within ECD_02324at 2414.877 kb on - strandat 2414.946 kb on - strandat 2414.946 kb on - strandat 2415.081 kb on + strand, within ECD_02325at 2415.097 kb on + strand, within ECD_02325at 2415.098 kb on - strand, within ECD_02325at 2415.250 kb on - strand, within ECD_02325at 2415.250 kb on - strand, within ECD_02325at 2415.382 kb on + strand, within ECD_02325at 2415.451 kb on + strand, within ECD_02325at 2415.451 kb on + strand, within ECD_02325at 2415.452 kb on - strand, within ECD_02325at 2415.452 kb on - strand, within ECD_02325at 2415.452 kb on - strand, within ECD_02325at 2415.452 kb on - strand, within ECD_02325at 2415.454 kb on - strand, within ECD_02325at 2415.590 kb on - strand, within ECD_02325at 2415.590 kb on - strand, within ECD_02325at 2415.654 kb on - strand, within ECD_02325at 2415.671 kb on - strand, within ECD_02325at 2415.671 kb on - strand, within ECD_02325at 2415.671 kb on - strand, within ECD_02325at 2415.672 kb on + strand, within ECD_02325at 2415.672 kb on + strand, within ECD_02325at 2415.673 kb on - strand, within ECD_02325at 2415.834 kb on + strandat 2415.834 kb on + strandat 2415.864 kb on - strandat 2415.973 kb on + strandat 2416.120 kb on + strandat 2416.121 kb on - strandat 2416.121 kb on - strandat 2416.123 kb on + strandat 2416.123 kb on + strandat 2416.124 kb on - strandat 2416.124 kb on - strandat 2416.124 kb on - strandat 2416.184 kb on + strandat 2416.510 kb on - strand, within ECD_02326at 2416.510 kb on - strand, within ECD_02326at 2416.510 kb on - strand, within ECD_02326at 2416.510 kb on - strand, within ECD_02326at 2416.557 kb on - strand, within ECD_02326at 2416.684 kb on + strand, within ECD_02326at 2416.685 kb on - strand, within ECD_02326at 2416.685 kb on - strand, within ECD_02326at 2416.688 kb on - strand, within ECD_02326at 2416.727 kb on - strand, within ECD_02326at 2416.893 kb on - strand, within ECD_02326at 2416.916 kb on - strand, within ECD_02326at 2416.928 kb on + strand, within ECD_02326at 2416.929 kb on - strand, within ECD_02326

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1259
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2,413,965 - ECD_02323 0.87 -0.2
2,414,092 - -0.7
2,414,092 - -0.3
2,414,127 - -0.5
2,414,265 - ECD_02324 0.22 -1.0
2,414,419 - ECD_02324 0.40 -0.6
2,414,777 - ECD_02324 0.83 +0.0
2,414,877 - +1.2
2,414,946 - -0.7
2,414,946 - -0.2
2,415,081 + ECD_02325 0.16 +0.5
2,415,097 + ECD_02325 0.18 -0.3
2,415,098 - ECD_02325 0.18 +0.4
2,415,250 - ECD_02325 0.33 +0.3
2,415,250 - ECD_02325 0.33 -0.9
2,415,382 + ECD_02325 0.46 -2.4
2,415,451 + ECD_02325 0.53 +1.2
2,415,451 + ECD_02325 0.53 -1.5
2,415,452 - ECD_02325 0.53 -0.1
2,415,452 - ECD_02325 0.53 -1.5
2,415,452 - ECD_02325 0.53 -0.3
2,415,452 - ECD_02325 0.53 -0.0
2,415,454 - ECD_02325 0.53 -0.7
2,415,590 - ECD_02325 0.66 -0.2
2,415,590 - ECD_02325 0.66 -0.7
2,415,654 - ECD_02325 0.73 -0.9
2,415,671 - ECD_02325 0.74 -2.7
2,415,671 - ECD_02325 0.74 -0.2
2,415,671 - ECD_02325 0.74 +0.1
2,415,672 + ECD_02325 0.74 +0.1
2,415,672 + ECD_02325 0.74 +0.5
2,415,673 - ECD_02325 0.75 -0.2
2,415,834 + -0.5
2,415,834 + +0.6
2,415,864 - -0.0
2,415,973 + +0.1
2,416,120 + -0.0
2,416,121 - +1.1
2,416,121 - -1.6
2,416,123 + -0.6
2,416,123 + +0.3
2,416,124 - +0.2
2,416,124 - +0.6
2,416,124 - +0.5
2,416,184 + +0.5
2,416,510 - ECD_02326 0.35 +0.2
2,416,510 - ECD_02326 0.35 +1.6
2,416,510 - ECD_02326 0.35 -0.0
2,416,510 - ECD_02326 0.35 +0.1
2,416,557 - ECD_02326 0.41 -2.1
2,416,684 + ECD_02326 0.57 -0.0
2,416,685 - ECD_02326 0.57 -0.6
2,416,685 - ECD_02326 0.57 -1.3
2,416,688 - ECD_02326 0.57 -0.6
2,416,727 - ECD_02326 0.62 +1.0
2,416,893 - ECD_02326 0.83 -0.7
2,416,916 - ECD_02326 0.86 -1.1
2,416,928 + ECD_02326 0.88 -0.7
2,416,929 - ECD_02326 0.88 +0.3

Or see this region's nucleotide sequence