Strain Fitness in Escherichia coli BL21 around ECD_01076

Experiment: Laval1259

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01074 and ECD_01075 are separated by 52 nucleotidesECD_01075 and ECD_01076 are separated by 11 nucleotidesECD_01076 and ECD_01077 overlap by 1 nucleotides ECD_01074: ECD_01074 - flagellar component of cell-distal portion of basal-body rod, at 1,137,296 to 1,138,078 _01074 ECD_01075: ECD_01075 - flagellar protein of basal-body outer-membrane L ring, at 1,138,131 to 1,138,829 _01075 ECD_01076: ECD_01076 - putative flagellar basal body protein, at 1,138,841 to 1,139,938 _01076 ECD_01077: ECD_01077 - flagellar rod assembly protein and murein hydrolase; flagellum-specific muramidase, at 1,139,938 to 1,140,879 _01077 Position (kb) 1138 1139 1140Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1137.947 kb on + strand, within ECD_01074at 1138.027 kb on + strandat 1138.151 kb on + strandat 1138.151 kb on + strandat 1138.155 kb on + strandat 1138.155 kb on + strandat 1138.308 kb on + strand, within ECD_01075at 1138.308 kb on + strand, within ECD_01075at 1138.430 kb on + strand, within ECD_01075at 1138.451 kb on + strand, within ECD_01075at 1138.556 kb on + strand, within ECD_01075at 1138.556 kb on + strand, within ECD_01075at 1138.556 kb on + strand, within ECD_01075at 1138.749 kb on + strand, within ECD_01075at 1138.764 kb on + strandat 1138.827 kb on + strandat 1138.863 kb on + strandat 1139.026 kb on + strand, within ECD_01076at 1139.029 kb on + strand, within ECD_01076at 1139.074 kb on + strand, within ECD_01076at 1139.074 kb on + strand, within ECD_01076at 1139.082 kb on + strand, within ECD_01076at 1139.197 kb on + strand, within ECD_01076at 1139.197 kb on + strand, within ECD_01076at 1139.197 kb on + strand, within ECD_01076at 1139.240 kb on + strand, within ECD_01076at 1139.240 kb on + strand, within ECD_01076at 1139.240 kb on + strand, within ECD_01076at 1139.296 kb on + strand, within ECD_01076at 1139.593 kb on + strand, within ECD_01076at 1139.605 kb on + strand, within ECD_01076at 1139.605 kb on + strand, within ECD_01076at 1139.685 kb on + strand, within ECD_01076at 1139.805 kb on + strand, within ECD_01076at 1139.805 kb on + strand, within ECD_01076at 1139.957 kb on + strandat 1139.999 kb on + strandat 1140.033 kb on + strand, within ECD_01077at 1140.145 kb on + strand, within ECD_01077at 1140.145 kb on + strand, within ECD_01077at 1140.147 kb on + strand, within ECD_01077at 1140.153 kb on + strand, within ECD_01077at 1140.153 kb on + strand, within ECD_01077at 1140.153 kb on + strand, within ECD_01077at 1140.153 kb on + strand, within ECD_01077at 1140.153 kb on + strand, within ECD_01077at 1140.153 kb on + strand, within ECD_01077at 1140.153 kb on + strand, within ECD_01077at 1140.157 kb on + strand, within ECD_01077at 1140.157 kb on + strand, within ECD_01077at 1140.157 kb on + strand, within ECD_01077at 1140.354 kb on + strand, within ECD_01077at 1140.358 kb on + strand, within ECD_01077at 1140.358 kb on + strand, within ECD_01077at 1140.359 kb on - strand, within ECD_01077at 1140.529 kb on + strand, within ECD_01077at 1140.673 kb on + strand, within ECD_01077at 1140.850 kb on + strandat 1140.881 kb on + strandat 1140.912 kb on + strandat 1140.912 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1259
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1,137,947 + ECD_01074 0.83 -0.8
1,138,027 + +0.1
1,138,151 + +1.1
1,138,151 + -0.1
1,138,155 + +0.0
1,138,155 + -0.8
1,138,308 + ECD_01075 0.25 +0.4
1,138,308 + ECD_01075 0.25 +0.0
1,138,430 + ECD_01075 0.43 +0.3
1,138,451 + ECD_01075 0.46 -0.6
1,138,556 + ECD_01075 0.61 -0.8
1,138,556 + ECD_01075 0.61 +0.8
1,138,556 + ECD_01075 0.61 -0.1
1,138,749 + ECD_01075 0.88 -0.0
1,138,764 + +0.1
1,138,827 + +1.1
1,138,863 + +0.3
1,139,026 + ECD_01076 0.17 -0.4
1,139,029 + ECD_01076 0.17 +0.1
1,139,074 + ECD_01076 0.21 -0.7
1,139,074 + ECD_01076 0.21 -0.3
1,139,082 + ECD_01076 0.22 +0.1
1,139,197 + ECD_01076 0.32 -1.1
1,139,197 + ECD_01076 0.32 +0.3
1,139,197 + ECD_01076 0.32 +0.1
1,139,240 + ECD_01076 0.36 -0.4
1,139,240 + ECD_01076 0.36 +0.2
1,139,240 + ECD_01076 0.36 -0.3
1,139,296 + ECD_01076 0.41 +0.1
1,139,593 + ECD_01076 0.68 +0.4
1,139,605 + ECD_01076 0.70 -0.6
1,139,605 + ECD_01076 0.70 +0.6
1,139,685 + ECD_01076 0.77 -1.2
1,139,805 + ECD_01076 0.88 +0.5
1,139,805 + ECD_01076 0.88 -0.3
1,139,957 + +0.3
1,139,999 + -0.2
1,140,033 + ECD_01077 0.10 -0.4
1,140,145 + ECD_01077 0.22 +0.3
1,140,145 + ECD_01077 0.22 -0.8
1,140,147 + ECD_01077 0.22 -2.1
1,140,153 + ECD_01077 0.23 +1.2
1,140,153 + ECD_01077 0.23 -1.7
1,140,153 + ECD_01077 0.23 +0.2
1,140,153 + ECD_01077 0.23 +0.1
1,140,153 + ECD_01077 0.23 -0.9
1,140,153 + ECD_01077 0.23 -0.6
1,140,153 + ECD_01077 0.23 +0.1
1,140,157 + ECD_01077 0.23 -0.9
1,140,157 + ECD_01077 0.23 +1.2
1,140,157 + ECD_01077 0.23 -0.1
1,140,354 + ECD_01077 0.44 +0.4
1,140,358 + ECD_01077 0.45 +0.8
1,140,358 + ECD_01077 0.45 +0.0
1,140,359 - ECD_01077 0.45 +3.2
1,140,529 + ECD_01077 0.63 +0.2
1,140,673 + ECD_01077 0.78 +1.3
1,140,850 + -0.9
1,140,881 + +0.3
1,140,912 + +0.6
1,140,912 + -0.1

Or see this region's nucleotide sequence