Strain Fitness in Escherichia coli BL21 around ECD_03768

Experiment: Laval1267

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03767 and ECD_03768 are separated by 167 nucleotidesECD_03768 and ECD_03769 are separated by 33 nucleotidesECD_03769 and ECD_03770 are separated by 98 nucleotides ECD_03767: ECD_03767 - 3-sulfolactaldehyde (SLA) reductase, NADH-dependent; gamma-hydroxybutyrate dehydrogenase, NADH-dependent, at 3,979,262 to 3,980,158 _03767 ECD_03768: ECD_03768 - 6-deoxy-6-sulfofructose kinase, at 3,980,326 to 3,981,222 _03768 ECD_03769: ECD_03769 - putative transcriptional regulator for sulfoquinovose utilization, at 3,981,256 to 3,982,041 _03769 ECD_03770: ECD_03770 - alpha-D-glucose-1-phosphate phosphatase, anomer-specific, at 3,982,140 to 3,982,739 _03770 Position (kb) 3980 3981 3982Strain fitness (log2 ratio) -2 -1 0 1at 3979.360 kb on + strand, within ECD_03767at 3979.360 kb on + strand, within ECD_03767at 3979.361 kb on - strand, within ECD_03767at 3979.361 kb on - strand, within ECD_03767at 3979.362 kb on + strand, within ECD_03767at 3979.363 kb on - strand, within ECD_03767at 3979.363 kb on - strand, within ECD_03767at 3979.442 kb on - strand, within ECD_03767at 3979.632 kb on + strand, within ECD_03767at 3979.632 kb on + strand, within ECD_03767at 3979.632 kb on + strand, within ECD_03767at 3979.633 kb on - strand, within ECD_03767at 3979.633 kb on - strand, within ECD_03767at 3979.633 kb on - strand, within ECD_03767at 3979.757 kb on + strand, within ECD_03767at 3979.789 kb on + strand, within ECD_03767at 3979.789 kb on + strand, within ECD_03767at 3979.789 kb on + strand, within ECD_03767at 3979.790 kb on - strand, within ECD_03767at 3979.850 kb on - strand, within ECD_03767at 3979.879 kb on + strand, within ECD_03767at 3979.879 kb on + strand, within ECD_03767at 3979.879 kb on + strand, within ECD_03767at 3979.879 kb on + strand, within ECD_03767at 3979.879 kb on + strand, within ECD_03767at 3979.879 kb on + strand, within ECD_03767at 3979.879 kb on + strand, within ECD_03767at 3979.880 kb on - strand, within ECD_03767at 3979.880 kb on - strand, within ECD_03767at 3979.880 kb on - strand, within ECD_03767at 3979.880 kb on - strand, within ECD_03767at 3979.880 kb on - strand, within ECD_03767at 3979.880 kb on - strand, within ECD_03767at 3979.882 kb on - strand, within ECD_03767at 3979.901 kb on - strand, within ECD_03767at 3979.904 kb on + strand, within ECD_03767at 3979.905 kb on - strand, within ECD_03767at 3979.973 kb on - strand, within ECD_03767at 3979.978 kb on + strand, within ECD_03767at 3980.315 kb on - strandat 3980.349 kb on + strandat 3980.349 kb on + strandat 3980.349 kb on + strandat 3980.350 kb on - strandat 3980.350 kb on - strandat 3980.350 kb on - strandat 3980.350 kb on - strandat 3980.350 kb on - strandat 3980.371 kb on + strandat 3980.371 kb on + strandat 3980.371 kb on + strandat 3980.372 kb on - strandat 3980.372 kb on - strandat 3980.372 kb on - strandat 3980.372 kb on - strandat 3980.374 kb on + strandat 3980.403 kb on + strandat 3980.407 kb on + strandat 3980.507 kb on + strand, within ECD_03768at 3980.508 kb on - strand, within ECD_03768at 3980.587 kb on - strand, within ECD_03768at 3980.587 kb on - strand, within ECD_03768at 3980.649 kb on + strand, within ECD_03768at 3980.650 kb on - strand, within ECD_03768at 3980.653 kb on + strand, within ECD_03768at 3980.653 kb on + strand, within ECD_03768at 3980.735 kb on + strand, within ECD_03768at 3980.735 kb on + strand, within ECD_03768at 3980.735 kb on + strand, within ECD_03768at 3980.735 kb on + strand, within ECD_03768at 3980.735 kb on + strand, within ECD_03768at 3980.735 kb on + strand, within ECD_03768at 3980.736 kb on - strand, within ECD_03768at 3980.736 kb on - strand, within ECD_03768at 3980.846 kb on + strand, within ECD_03768at 3980.846 kb on + strand, within ECD_03768at 3980.847 kb on - strand, within ECD_03768at 3980.847 kb on - strand, within ECD_03768at 3981.035 kb on + strand, within ECD_03768at 3981.036 kb on - strand, within ECD_03768at 3981.036 kb on - strand, within ECD_03768at 3981.036 kb on - strand, within ECD_03768at 3981.036 kb on - strand, within ECD_03768at 3981.040 kb on - strand, within ECD_03768at 3981.040 kb on - strand, within ECD_03768at 3981.104 kb on + strand, within ECD_03768at 3981.326 kb on - strandat 3981.326 kb on - strandat 3981.326 kb on - strandat 3981.327 kb on + strandat 3981.327 kb on + strandat 3981.327 kb on + strandat 3981.327 kb on + strandat 3981.327 kb on + strandat 3981.327 kb on + strandat 3981.327 kb on + strandat 3981.328 kb on - strandat 3981.333 kb on + strandat 3981.333 kb on + strandat 3981.334 kb on - strandat 3981.417 kb on + strand, within ECD_03769at 3981.532 kb on + strand, within ECD_03769at 3981.532 kb on + strand, within ECD_03769at 3981.532 kb on + strand, within ECD_03769at 3981.555 kb on - strand, within ECD_03769at 3981.555 kb on - strand, within ECD_03769at 3981.558 kb on + strand, within ECD_03769at 3981.599 kb on + strand, within ECD_03769at 3981.604 kb on - strand, within ECD_03769at 3981.610 kb on - strand, within ECD_03769at 3981.610 kb on - strand, within ECD_03769at 3981.711 kb on + strand, within ECD_03769at 3981.715 kb on - strand, within ECD_03769at 3981.769 kb on + strand, within ECD_03769at 3981.776 kb on + strand, within ECD_03769at 3981.777 kb on - strand, within ECD_03769at 3981.837 kb on + strand, within ECD_03769at 3981.897 kb on + strand, within ECD_03769at 3981.898 kb on - strand, within ECD_03769at 3981.898 kb on - strand, within ECD_03769at 3981.898 kb on - strand, within ECD_03769at 3981.898 kb on - strand, within ECD_03769at 3981.901 kb on + strand, within ECD_03769at 3981.901 kb on + strand, within ECD_03769at 3981.901 kb on + strand, within ECD_03769at 3981.901 kb on + strand, within ECD_03769at 3981.901 kb on + strand, within ECD_03769at 3981.902 kb on - strand, within ECD_03769at 3981.902 kb on - strand, within ECD_03769at 3981.902 kb on - strand, within ECD_03769at 3981.902 kb on - strand, within ECD_03769at 3981.995 kb on + strandat 3982.070 kb on - strandat 3982.070 kb on - strandat 3982.070 kb on - strandat 3982.081 kb on + strandat 3982.081 kb on + strandat 3982.081 kb on + strandat 3982.082 kb on - strandat 3982.111 kb on - strandat 3982.146 kb on + strandat 3982.147 kb on - strandat 3982.147 kb on - strandat 3982.149 kb on - strandat 3982.149 kb on - strandat 3982.160 kb on - strandat 3982.216 kb on + strand, within ECD_03770

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1267
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3,979,360 + ECD_03767 0.11 +0.2
3,979,360 + ECD_03767 0.11 -0.1
3,979,361 - ECD_03767 0.11 -0.3
3,979,361 - ECD_03767 0.11 -0.0
3,979,362 + ECD_03767 0.11 +0.3
3,979,363 - ECD_03767 0.11 +1.2
3,979,363 - ECD_03767 0.11 +0.7
3,979,442 - ECD_03767 0.20 -0.9
3,979,632 + ECD_03767 0.41 +0.4
3,979,632 + ECD_03767 0.41 +0.8
3,979,632 + ECD_03767 0.41 -0.2
3,979,633 - ECD_03767 0.41 -0.6
3,979,633 - ECD_03767 0.41 -0.3
3,979,633 - ECD_03767 0.41 +0.0
3,979,757 + ECD_03767 0.55 +0.1
3,979,789 + ECD_03767 0.59 +0.3
3,979,789 + ECD_03767 0.59 +0.2
3,979,789 + ECD_03767 0.59 +0.2
3,979,790 - ECD_03767 0.59 +0.3
3,979,850 - ECD_03767 0.66 -1.4
3,979,879 + ECD_03767 0.69 +0.8
3,979,879 + ECD_03767 0.69 -0.0
3,979,879 + ECD_03767 0.69 -0.2
3,979,879 + ECD_03767 0.69 +1.2
3,979,879 + ECD_03767 0.69 +0.6
3,979,879 + ECD_03767 0.69 -0.1
3,979,879 + ECD_03767 0.69 +0.6
3,979,880 - ECD_03767 0.69 -0.2
3,979,880 - ECD_03767 0.69 -1.3
3,979,880 - ECD_03767 0.69 +0.4
3,979,880 - ECD_03767 0.69 -0.1
3,979,880 - ECD_03767 0.69 +1.3
3,979,880 - ECD_03767 0.69 +0.6
3,979,882 - ECD_03767 0.69 -0.5
3,979,901 - ECD_03767 0.71 +0.6
3,979,904 + ECD_03767 0.72 -1.0
3,979,905 - ECD_03767 0.72 -0.0
3,979,973 - ECD_03767 0.79 +0.1
3,979,978 + ECD_03767 0.80 +0.2
3,980,315 - +0.0
3,980,349 + -1.2
3,980,349 + -0.2
3,980,349 + -0.3
3,980,350 - -1.0
3,980,350 - +0.2
3,980,350 - +0.3
3,980,350 - -0.7
3,980,350 - -0.9
3,980,371 + -0.4
3,980,371 + +0.0
3,980,371 + -0.2
3,980,372 - -2.7
3,980,372 - +0.8
3,980,372 - +0.2
3,980,372 - +0.2
3,980,374 + -0.0
3,980,403 + +1.4
3,980,407 + +0.0
3,980,507 + ECD_03768 0.20 -0.0
3,980,508 - ECD_03768 0.20 -0.3
3,980,587 - ECD_03768 0.29 +1.5
3,980,587 - ECD_03768 0.29 -0.2
3,980,649 + ECD_03768 0.36 +0.8
3,980,650 - ECD_03768 0.36 +0.2
3,980,653 + ECD_03768 0.36 -0.5
3,980,653 + ECD_03768 0.36 +0.1
3,980,735 + ECD_03768 0.46 +0.5
3,980,735 + ECD_03768 0.46 +1.3
3,980,735 + ECD_03768 0.46 +0.8
3,980,735 + ECD_03768 0.46 -0.4
3,980,735 + ECD_03768 0.46 +0.7
3,980,735 + ECD_03768 0.46 +0.3
3,980,736 - ECD_03768 0.46 +0.0
3,980,736 - ECD_03768 0.46 +0.1
3,980,846 + ECD_03768 0.58 +1.0
3,980,846 + ECD_03768 0.58 -0.8
3,980,847 - ECD_03768 0.58 +0.8
3,980,847 - ECD_03768 0.58 +0.1
3,981,035 + ECD_03768 0.79 +0.5
3,981,036 - ECD_03768 0.79 +0.3
3,981,036 - ECD_03768 0.79 -0.1
3,981,036 - ECD_03768 0.79 -1.0
3,981,036 - ECD_03768 0.79 +0.1
3,981,040 - ECD_03768 0.80 +1.6
3,981,040 - ECD_03768 0.80 +0.5
3,981,104 + ECD_03768 0.87 +0.3
3,981,326 - +0.3
3,981,326 - +0.5
3,981,326 - -0.1
3,981,327 + +0.1
3,981,327 + +0.2
3,981,327 + +0.5
3,981,327 + +0.2
3,981,327 + +0.8
3,981,327 + -0.0
3,981,327 + -0.1
3,981,328 - +0.2
3,981,333 + -0.3
3,981,333 + -0.8
3,981,334 - +0.1
3,981,417 + ECD_03769 0.20 +0.3
3,981,532 + ECD_03769 0.35 +0.8
3,981,532 + ECD_03769 0.35 +0.5
3,981,532 + ECD_03769 0.35 -0.2
3,981,555 - ECD_03769 0.38 -0.2
3,981,555 - ECD_03769 0.38 -0.5
3,981,558 + ECD_03769 0.38 +0.9
3,981,599 + ECD_03769 0.44 +0.1
3,981,604 - ECD_03769 0.44 +0.7
3,981,610 - ECD_03769 0.45 +0.0
3,981,610 - ECD_03769 0.45 +0.6
3,981,711 + ECD_03769 0.58 +0.6
3,981,715 - ECD_03769 0.58 +0.5
3,981,769 + ECD_03769 0.65 +0.8
3,981,776 + ECD_03769 0.66 -0.5
3,981,777 - ECD_03769 0.66 -0.2
3,981,837 + ECD_03769 0.74 +1.1
3,981,897 + ECD_03769 0.82 +0.5
3,981,898 - ECD_03769 0.82 +0.6
3,981,898 - ECD_03769 0.82 +0.0
3,981,898 - ECD_03769 0.82 +0.8
3,981,898 - ECD_03769 0.82 -0.0
3,981,901 + ECD_03769 0.82 -1.0
3,981,901 + ECD_03769 0.82 -0.6
3,981,901 + ECD_03769 0.82 -0.3
3,981,901 + ECD_03769 0.82 -2.4
3,981,901 + ECD_03769 0.82 -0.6
3,981,902 - ECD_03769 0.82 -0.7
3,981,902 - ECD_03769 0.82 -0.7
3,981,902 - ECD_03769 0.82 -1.4
3,981,902 - ECD_03769 0.82 -1.2
3,981,995 + +0.4
3,982,070 - -0.7
3,982,070 - +0.5
3,982,070 - +1.4
3,982,081 + +0.7
3,982,081 + +1.4
3,982,081 + +1.0
3,982,082 - +0.2
3,982,111 - -1.0
3,982,146 + +0.2
3,982,147 - -0.8
3,982,147 - +0.3
3,982,149 - -0.1
3,982,149 - -0.2
3,982,160 - +0.4
3,982,216 + ECD_03770 0.13 +0.9

Or see this region's nucleotide sequence