Experiment: Laval1267
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03767 and ECD_03768 are separated by 167 nucleotides ECD_03768 and ECD_03769 are separated by 33 nucleotides ECD_03769 and ECD_03770 are separated by 98 nucleotides
ECD_03767: ECD_03767 - 3-sulfolactaldehyde (SLA) reductase, NADH-dependent; gamma-hydroxybutyrate dehydrogenase, NADH-dependent, at 3,979,262 to 3,980,158
_03767
ECD_03768: ECD_03768 - 6-deoxy-6-sulfofructose kinase, at 3,980,326 to 3,981,222
_03768
ECD_03769: ECD_03769 - putative transcriptional regulator for sulfoquinovose utilization, at 3,981,256 to 3,982,041
_03769
ECD_03770: ECD_03770 - alpha-D-glucose-1-phosphate phosphatase, anomer-specific, at 3,982,140 to 3,982,739
_03770
Position (kb)
3980
3981
3982 Strain fitness (log2 ratio)
-2
-1
0
1 at 3979.360 kb on + strand, within ECD_03767 at 3979.360 kb on + strand, within ECD_03767 at 3979.361 kb on - strand, within ECD_03767 at 3979.361 kb on - strand, within ECD_03767 at 3979.362 kb on + strand, within ECD_03767 at 3979.363 kb on - strand, within ECD_03767 at 3979.363 kb on - strand, within ECD_03767 at 3979.442 kb on - strand, within ECD_03767 at 3979.632 kb on + strand, within ECD_03767 at 3979.632 kb on + strand, within ECD_03767 at 3979.632 kb on + strand, within ECD_03767 at 3979.633 kb on - strand, within ECD_03767 at 3979.633 kb on - strand, within ECD_03767 at 3979.633 kb on - strand, within ECD_03767 at 3979.757 kb on + strand, within ECD_03767 at 3979.789 kb on + strand, within ECD_03767 at 3979.789 kb on + strand, within ECD_03767 at 3979.789 kb on + strand, within ECD_03767 at 3979.790 kb on - strand, within ECD_03767 at 3979.850 kb on - strand, within ECD_03767 at 3979.879 kb on + strand, within ECD_03767 at 3979.879 kb on + strand, within ECD_03767 at 3979.879 kb on + strand, within ECD_03767 at 3979.879 kb on + strand, within ECD_03767 at 3979.879 kb on + strand, within ECD_03767 at 3979.879 kb on + strand, within ECD_03767 at 3979.879 kb on + strand, within ECD_03767 at 3979.880 kb on - strand, within ECD_03767 at 3979.880 kb on - strand, within ECD_03767 at 3979.880 kb on - strand, within ECD_03767 at 3979.880 kb on - strand, within ECD_03767 at 3979.880 kb on - strand, within ECD_03767 at 3979.880 kb on - strand, within ECD_03767 at 3979.882 kb on - strand, within ECD_03767 at 3979.901 kb on - strand, within ECD_03767 at 3979.904 kb on + strand, within ECD_03767 at 3979.905 kb on - strand, within ECD_03767 at 3979.973 kb on - strand, within ECD_03767 at 3979.978 kb on + strand, within ECD_03767 at 3980.315 kb on - strand at 3980.349 kb on + strand at 3980.349 kb on + strand at 3980.349 kb on + strand at 3980.350 kb on - strand at 3980.350 kb on - strand at 3980.350 kb on - strand at 3980.350 kb on - strand at 3980.350 kb on - strand at 3980.371 kb on + strand at 3980.371 kb on + strand at 3980.371 kb on + strand at 3980.372 kb on - strand at 3980.372 kb on - strand at 3980.372 kb on - strand at 3980.372 kb on - strand at 3980.374 kb on + strand at 3980.403 kb on + strand at 3980.407 kb on + strand at 3980.507 kb on + strand, within ECD_03768 at 3980.508 kb on - strand, within ECD_03768 at 3980.587 kb on - strand, within ECD_03768 at 3980.587 kb on - strand, within ECD_03768 at 3980.649 kb on + strand, within ECD_03768 at 3980.650 kb on - strand, within ECD_03768 at 3980.653 kb on + strand, within ECD_03768 at 3980.653 kb on + strand, within ECD_03768 at 3980.735 kb on + strand, within ECD_03768 at 3980.735 kb on + strand, within ECD_03768 at 3980.735 kb on + strand, within ECD_03768 at 3980.735 kb on + strand, within ECD_03768 at 3980.735 kb on + strand, within ECD_03768 at 3980.735 kb on + strand, within ECD_03768 at 3980.736 kb on - strand, within ECD_03768 at 3980.736 kb on - strand, within ECD_03768 at 3980.846 kb on + strand, within ECD_03768 at 3980.846 kb on + strand, within ECD_03768 at 3980.847 kb on - strand, within ECD_03768 at 3980.847 kb on - strand, within ECD_03768 at 3981.035 kb on + strand, within ECD_03768 at 3981.036 kb on - strand, within ECD_03768 at 3981.036 kb on - strand, within ECD_03768 at 3981.036 kb on - strand, within ECD_03768 at 3981.036 kb on - strand, within ECD_03768 at 3981.040 kb on - strand, within ECD_03768 at 3981.040 kb on - strand, within ECD_03768 at 3981.104 kb on + strand, within ECD_03768 at 3981.326 kb on - strand at 3981.326 kb on - strand at 3981.326 kb on - strand at 3981.327 kb on + strand at 3981.327 kb on + strand at 3981.327 kb on + strand at 3981.327 kb on + strand at 3981.327 kb on + strand at 3981.327 kb on + strand at 3981.327 kb on + strand at 3981.328 kb on - strand at 3981.333 kb on + strand at 3981.333 kb on + strand at 3981.334 kb on - strand at 3981.417 kb on + strand, within ECD_03769 at 3981.532 kb on + strand, within ECD_03769 at 3981.532 kb on + strand, within ECD_03769 at 3981.532 kb on + strand, within ECD_03769 at 3981.555 kb on - strand, within ECD_03769 at 3981.555 kb on - strand, within ECD_03769 at 3981.558 kb on + strand, within ECD_03769 at 3981.599 kb on + strand, within ECD_03769 at 3981.604 kb on - strand, within ECD_03769 at 3981.610 kb on - strand, within ECD_03769 at 3981.610 kb on - strand, within ECD_03769 at 3981.711 kb on + strand, within ECD_03769 at 3981.715 kb on - strand, within ECD_03769 at 3981.769 kb on + strand, within ECD_03769 at 3981.776 kb on + strand, within ECD_03769 at 3981.777 kb on - strand, within ECD_03769 at 3981.837 kb on + strand, within ECD_03769 at 3981.897 kb on + strand, within ECD_03769 at 3981.898 kb on - strand, within ECD_03769 at 3981.898 kb on - strand, within ECD_03769 at 3981.898 kb on - strand, within ECD_03769 at 3981.898 kb on - strand, within ECD_03769 at 3981.901 kb on + strand, within ECD_03769 at 3981.901 kb on + strand, within ECD_03769 at 3981.901 kb on + strand, within ECD_03769 at 3981.901 kb on + strand, within ECD_03769 at 3981.901 kb on + strand, within ECD_03769 at 3981.902 kb on - strand, within ECD_03769 at 3981.902 kb on - strand, within ECD_03769 at 3981.902 kb on - strand, within ECD_03769 at 3981.902 kb on - strand, within ECD_03769 at 3981.995 kb on + strand at 3982.070 kb on - strand at 3982.070 kb on - strand at 3982.070 kb on - strand at 3982.081 kb on + strand at 3982.081 kb on + strand at 3982.081 kb on + strand at 3982.082 kb on - strand at 3982.111 kb on - strand at 3982.146 kb on + strand at 3982.147 kb on - strand at 3982.147 kb on - strand at 3982.149 kb on - strand at 3982.149 kb on - strand at 3982.160 kb on - strand at 3982.216 kb on + strand, within ECD_03770
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1267 remove 3,979,360 + ECD_03767 0.11 +0.2 3,979,360 + ECD_03767 0.11 -0.1 3,979,361 - ECD_03767 0.11 -0.3 3,979,361 - ECD_03767 0.11 -0.0 3,979,362 + ECD_03767 0.11 +0.3 3,979,363 - ECD_03767 0.11 +1.2 3,979,363 - ECD_03767 0.11 +0.7 3,979,442 - ECD_03767 0.20 -0.9 3,979,632 + ECD_03767 0.41 +0.4 3,979,632 + ECD_03767 0.41 +0.8 3,979,632 + ECD_03767 0.41 -0.2 3,979,633 - ECD_03767 0.41 -0.6 3,979,633 - ECD_03767 0.41 -0.3 3,979,633 - ECD_03767 0.41 +0.0 3,979,757 + ECD_03767 0.55 +0.1 3,979,789 + ECD_03767 0.59 +0.3 3,979,789 + ECD_03767 0.59 +0.2 3,979,789 + ECD_03767 0.59 +0.2 3,979,790 - ECD_03767 0.59 +0.3 3,979,850 - ECD_03767 0.66 -1.4 3,979,879 + ECD_03767 0.69 +0.8 3,979,879 + ECD_03767 0.69 -0.0 3,979,879 + ECD_03767 0.69 -0.2 3,979,879 + ECD_03767 0.69 +1.2 3,979,879 + ECD_03767 0.69 +0.6 3,979,879 + ECD_03767 0.69 -0.1 3,979,879 + ECD_03767 0.69 +0.6 3,979,880 - ECD_03767 0.69 -0.2 3,979,880 - ECD_03767 0.69 -1.3 3,979,880 - ECD_03767 0.69 +0.4 3,979,880 - ECD_03767 0.69 -0.1 3,979,880 - ECD_03767 0.69 +1.3 3,979,880 - ECD_03767 0.69 +0.6 3,979,882 - ECD_03767 0.69 -0.5 3,979,901 - ECD_03767 0.71 +0.6 3,979,904 + ECD_03767 0.72 -1.0 3,979,905 - ECD_03767 0.72 -0.0 3,979,973 - ECD_03767 0.79 +0.1 3,979,978 + ECD_03767 0.80 +0.2 3,980,315 - +0.0 3,980,349 + -1.2 3,980,349 + -0.2 3,980,349 + -0.3 3,980,350 - -1.0 3,980,350 - +0.2 3,980,350 - +0.3 3,980,350 - -0.7 3,980,350 - -0.9 3,980,371 + -0.4 3,980,371 + +0.0 3,980,371 + -0.2 3,980,372 - -2.7 3,980,372 - +0.8 3,980,372 - +0.2 3,980,372 - +0.2 3,980,374 + -0.0 3,980,403 + +1.4 3,980,407 + +0.0 3,980,507 + ECD_03768 0.20 -0.0 3,980,508 - ECD_03768 0.20 -0.3 3,980,587 - ECD_03768 0.29 +1.5 3,980,587 - ECD_03768 0.29 -0.2 3,980,649 + ECD_03768 0.36 +0.8 3,980,650 - ECD_03768 0.36 +0.2 3,980,653 + ECD_03768 0.36 -0.5 3,980,653 + ECD_03768 0.36 +0.1 3,980,735 + ECD_03768 0.46 +0.5 3,980,735 + ECD_03768 0.46 +1.3 3,980,735 + ECD_03768 0.46 +0.8 3,980,735 + ECD_03768 0.46 -0.4 3,980,735 + ECD_03768 0.46 +0.7 3,980,735 + ECD_03768 0.46 +0.3 3,980,736 - ECD_03768 0.46 +0.0 3,980,736 - ECD_03768 0.46 +0.1 3,980,846 + ECD_03768 0.58 +1.0 3,980,846 + ECD_03768 0.58 -0.8 3,980,847 - ECD_03768 0.58 +0.8 3,980,847 - ECD_03768 0.58 +0.1 3,981,035 + ECD_03768 0.79 +0.5 3,981,036 - ECD_03768 0.79 +0.3 3,981,036 - ECD_03768 0.79 -0.1 3,981,036 - ECD_03768 0.79 -1.0 3,981,036 - ECD_03768 0.79 +0.1 3,981,040 - ECD_03768 0.80 +1.6 3,981,040 - ECD_03768 0.80 +0.5 3,981,104 + ECD_03768 0.87 +0.3 3,981,326 - +0.3 3,981,326 - +0.5 3,981,326 - -0.1 3,981,327 + +0.1 3,981,327 + +0.2 3,981,327 + +0.5 3,981,327 + +0.2 3,981,327 + +0.8 3,981,327 + -0.0 3,981,327 + -0.1 3,981,328 - +0.2 3,981,333 + -0.3 3,981,333 + -0.8 3,981,334 - +0.1 3,981,417 + ECD_03769 0.20 +0.3 3,981,532 + ECD_03769 0.35 +0.8 3,981,532 + ECD_03769 0.35 +0.5 3,981,532 + ECD_03769 0.35 -0.2 3,981,555 - ECD_03769 0.38 -0.2 3,981,555 - ECD_03769 0.38 -0.5 3,981,558 + ECD_03769 0.38 +0.9 3,981,599 + ECD_03769 0.44 +0.1 3,981,604 - ECD_03769 0.44 +0.7 3,981,610 - ECD_03769 0.45 +0.0 3,981,610 - ECD_03769 0.45 +0.6 3,981,711 + ECD_03769 0.58 +0.6 3,981,715 - ECD_03769 0.58 +0.5 3,981,769 + ECD_03769 0.65 +0.8 3,981,776 + ECD_03769 0.66 -0.5 3,981,777 - ECD_03769 0.66 -0.2 3,981,837 + ECD_03769 0.74 +1.1 3,981,897 + ECD_03769 0.82 +0.5 3,981,898 - ECD_03769 0.82 +0.6 3,981,898 - ECD_03769 0.82 +0.0 3,981,898 - ECD_03769 0.82 +0.8 3,981,898 - ECD_03769 0.82 -0.0 3,981,901 + ECD_03769 0.82 -1.0 3,981,901 + ECD_03769 0.82 -0.6 3,981,901 + ECD_03769 0.82 -0.3 3,981,901 + ECD_03769 0.82 -2.4 3,981,901 + ECD_03769 0.82 -0.6 3,981,902 - ECD_03769 0.82 -0.7 3,981,902 - ECD_03769 0.82 -0.7 3,981,902 - ECD_03769 0.82 -1.4 3,981,902 - ECD_03769 0.82 -1.2 3,981,995 + +0.4 3,982,070 - -0.7 3,982,070 - +0.5 3,982,070 - +1.4 3,982,081 + +0.7 3,982,081 + +1.4 3,982,081 + +1.0 3,982,082 - +0.2 3,982,111 - -1.0 3,982,146 + +0.2 3,982,147 - -0.8 3,982,147 - +0.3 3,982,149 - -0.1 3,982,149 - -0.2 3,982,160 - +0.4 3,982,216 + ECD_03770 0.13 +0.9
Or see this region's nucleotide sequence