Experiment: Laval1267
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03230 and ECD_03231 are separated by 10 nucleotides ECD_03231 and ECD_03232 overlap by 4 nucleotides ECD_03232 and ECD_03233 overlap by 1 nucleotides
ECD_03230: ECD_03230 - DUF2620 family protein, at 3,367,726 to 3,368,079
_03230
ECD_03231: ECD_03231 - phosphotriesterase homology protein, at 3,368,090 to 3,368,968
_03231
ECD_03232: ECD_03232 - phosphopentomutase-related metalloenzyme superfamily protein, at 3,368,965 to 3,370,191
_03232
ECD_03233: ECD_03233 - putative pyridoxal 5'-phosphate binding protein, at 3,370,191 to 3,371,354
_03233
Position (kb)
3368
3369
3370
3371 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3368.054 kb on - strand at 3368.120 kb on + strand at 3368.120 kb on + strand at 3368.173 kb on + strand at 3368.186 kb on + strand, within ECD_03231 at 3368.190 kb on + strand, within ECD_03231 at 3368.191 kb on - strand, within ECD_03231 at 3368.202 kb on + strand, within ECD_03231 at 3368.240 kb on - strand, within ECD_03231 at 3368.240 kb on - strand, within ECD_03231 at 3368.240 kb on - strand, within ECD_03231 at 3368.303 kb on - strand, within ECD_03231 at 3368.319 kb on + strand, within ECD_03231 at 3368.322 kb on + strand, within ECD_03231 at 3368.322 kb on + strand, within ECD_03231 at 3368.323 kb on - strand, within ECD_03231 at 3368.323 kb on - strand, within ECD_03231 at 3368.356 kb on - strand, within ECD_03231 at 3368.453 kb on + strand, within ECD_03231 at 3368.454 kb on - strand, within ECD_03231 at 3368.454 kb on - strand, within ECD_03231 at 3368.494 kb on + strand, within ECD_03231 at 3368.545 kb on + strand, within ECD_03231 at 3368.546 kb on - strand, within ECD_03231 at 3368.546 kb on - strand, within ECD_03231 at 3368.549 kb on + strand, within ECD_03231 at 3368.549 kb on + strand, within ECD_03231 at 3368.549 kb on + strand, within ECD_03231 at 3368.550 kb on - strand, within ECD_03231 at 3368.550 kb on - strand, within ECD_03231 at 3368.550 kb on - strand, within ECD_03231 at 3368.718 kb on + strand, within ECD_03231 at 3368.762 kb on + strand, within ECD_03231 at 3368.762 kb on + strand, within ECD_03231 at 3368.762 kb on + strand, within ECD_03231 at 3368.763 kb on - strand, within ECD_03231 at 3368.774 kb on - strand, within ECD_03231 at 3368.774 kb on - strand, within ECD_03231 at 3368.797 kb on - strand, within ECD_03231 at 3368.821 kb on + strand, within ECD_03231 at 3368.821 kb on + strand, within ECD_03231 at 3368.871 kb on + strand, within ECD_03231 at 3368.920 kb on + strand at 3368.920 kb on + strand at 3368.921 kb on - strand at 3368.968 kb on + strand at 3368.969 kb on - strand at 3369.267 kb on - strand, within ECD_03232 at 3369.370 kb on - strand, within ECD_03232 at 3369.542 kb on + strand, within ECD_03232 at 3369.543 kb on - strand, within ECD_03232 at 3369.543 kb on - strand, within ECD_03232 at 3369.543 kb on - strand, within ECD_03232 at 3369.573 kb on + strand, within ECD_03232 at 3369.573 kb on + strand, within ECD_03232 at 3369.573 kb on + strand, within ECD_03232 at 3369.574 kb on - strand, within ECD_03232 at 3369.642 kb on + strand, within ECD_03232 at 3369.643 kb on - strand, within ECD_03232 at 3369.661 kb on + strand, within ECD_03232 at 3369.679 kb on - strand, within ECD_03232 at 3370.099 kb on - strand at 3370.099 kb on - strand at 3370.162 kb on - strand at 3370.172 kb on - strand at 3370.172 kb on - strand at 3370.192 kb on + strand at 3370.330 kb on - strand, within ECD_03233 at 3370.360 kb on + strand, within ECD_03233 at 3370.460 kb on - strand, within ECD_03233 at 3370.460 kb on - strand, within ECD_03233 at 3370.480 kb on + strand, within ECD_03233 at 3370.480 kb on + strand, within ECD_03233 at 3370.480 kb on + strand, within ECD_03233 at 3370.481 kb on - strand, within ECD_03233 at 3370.515 kb on + strand, within ECD_03233 at 3370.516 kb on - strand, within ECD_03233 at 3370.532 kb on + strand, within ECD_03233 at 3370.568 kb on + strand, within ECD_03233 at 3370.851 kb on + strand, within ECD_03233 at 3370.851 kb on + strand, within ECD_03233 at 3370.852 kb on - strand, within ECD_03233 at 3370.973 kb on + strand, within ECD_03233 at 3370.973 kb on + strand, within ECD_03233 at 3371.038 kb on - strand, within ECD_03233 at 3371.038 kb on - strand, within ECD_03233 at 3371.098 kb on + strand, within ECD_03233 at 3371.160 kb on - strand, within ECD_03233
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1267 remove 3,368,054 - +0.9 3,368,120 + +0.4 3,368,120 + -0.5 3,368,173 + -1.4 3,368,186 + ECD_03231 0.11 +0.1 3,368,190 + ECD_03231 0.11 +0.2 3,368,191 - ECD_03231 0.11 +0.5 3,368,202 + ECD_03231 0.13 -0.6 3,368,240 - ECD_03231 0.17 -0.2 3,368,240 - ECD_03231 0.17 +0.2 3,368,240 - ECD_03231 0.17 +0.4 3,368,303 - ECD_03231 0.24 -0.2 3,368,319 + ECD_03231 0.26 +0.2 3,368,322 + ECD_03231 0.26 -0.9 3,368,322 + ECD_03231 0.26 -1.6 3,368,323 - ECD_03231 0.27 +0.3 3,368,323 - ECD_03231 0.27 +0.2 3,368,356 - ECD_03231 0.30 -0.9 3,368,453 + ECD_03231 0.41 -0.5 3,368,454 - ECD_03231 0.41 -0.1 3,368,454 - ECD_03231 0.41 +0.5 3,368,494 + ECD_03231 0.46 -0.3 3,368,545 + ECD_03231 0.52 -0.6 3,368,546 - ECD_03231 0.52 -0.2 3,368,546 - ECD_03231 0.52 +0.5 3,368,549 + ECD_03231 0.52 +1.0 3,368,549 + ECD_03231 0.52 +0.9 3,368,549 + ECD_03231 0.52 -0.4 3,368,550 - ECD_03231 0.52 +0.1 3,368,550 - ECD_03231 0.52 -0.5 3,368,550 - ECD_03231 0.52 -0.2 3,368,718 + ECD_03231 0.71 +0.1 3,368,762 + ECD_03231 0.76 +0.6 3,368,762 + ECD_03231 0.76 -0.7 3,368,762 + ECD_03231 0.76 -1.2 3,368,763 - ECD_03231 0.77 -0.5 3,368,774 - ECD_03231 0.78 +0.5 3,368,774 - ECD_03231 0.78 +1.3 3,368,797 - ECD_03231 0.80 -0.6 3,368,821 + ECD_03231 0.83 +0.3 3,368,821 + ECD_03231 0.83 -0.3 3,368,871 + ECD_03231 0.89 +0.2 3,368,920 + +0.9 3,368,920 + +0.2 3,368,921 - +0.5 3,368,968 + -0.2 3,368,969 - -0.2 3,369,267 - ECD_03232 0.25 -0.9 3,369,370 - ECD_03232 0.33 -1.2 3,369,542 + ECD_03232 0.47 +0.0 3,369,543 - ECD_03232 0.47 +0.4 3,369,543 - ECD_03232 0.47 -1.5 3,369,543 - ECD_03232 0.47 -1.5 3,369,573 + ECD_03232 0.50 -0.6 3,369,573 + ECD_03232 0.50 -2.1 3,369,573 + ECD_03232 0.50 +0.3 3,369,574 - ECD_03232 0.50 +0.9 3,369,642 + ECD_03232 0.55 +0.7 3,369,643 - ECD_03232 0.55 -0.8 3,369,661 + ECD_03232 0.57 +1.7 3,369,679 - ECD_03232 0.58 +0.4 3,370,099 - -0.4 3,370,099 - -0.4 3,370,162 - +1.7 3,370,172 - +2.7 3,370,172 - -0.1 3,370,192 + +0.6 3,370,330 - ECD_03233 0.12 +0.2 3,370,360 + ECD_03233 0.15 -0.3 3,370,460 - ECD_03233 0.23 -0.6 3,370,460 - ECD_03233 0.23 -0.2 3,370,480 + ECD_03233 0.25 -0.1 3,370,480 + ECD_03233 0.25 +0.4 3,370,480 + ECD_03233 0.25 +0.7 3,370,481 - ECD_03233 0.25 -0.4 3,370,515 + ECD_03233 0.28 +0.8 3,370,516 - ECD_03233 0.28 -0.3 3,370,532 + ECD_03233 0.29 -0.2 3,370,568 + ECD_03233 0.32 +0.6 3,370,851 + ECD_03233 0.57 -0.1 3,370,851 + ECD_03233 0.57 -0.3 3,370,852 - ECD_03233 0.57 +0.4 3,370,973 + ECD_03233 0.67 -1.1 3,370,973 + ECD_03233 0.67 +2.1 3,371,038 - ECD_03233 0.73 -2.1 3,371,038 - ECD_03233 0.73 +1.0 3,371,098 + ECD_03233 0.78 +0.4 3,371,160 - ECD_03233 0.83 +0.6
Or see this region's nucleotide sequence