Experiment: Laval1267
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02733 and ECD_02734 are separated by 56 nucleotides ECD_02734 and ECD_02735 are separated by 265 nucleotides
ECD_02733: ECD_02733 - 6-phospho-beta-glucosidase A, at 2,874,522 to 2,875,961
_02733
ECD_02734: ECD_02734 - putative NAD(P)-dependent oxidoreductase, at 2,876,018 to 2,876,761
_02734
ECD_02735: ECD_02735 - glycine decarboxylase, PLP-dependent, subunit P of glycine cleavage complex, at 2,877,027 to 2,879,900
_02735
Position (kb)
2876
2877 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2875.023 kb on + strand, within ECD_02733 at 2875.023 kb on + strand, within ECD_02733 at 2875.024 kb on - strand, within ECD_02733 at 2875.041 kb on + strand, within ECD_02733 at 2875.041 kb on + strand, within ECD_02733 at 2875.041 kb on + strand, within ECD_02733 at 2875.122 kb on + strand, within ECD_02733 at 2875.122 kb on + strand, within ECD_02733 at 2875.122 kb on + strand, within ECD_02733 at 2875.122 kb on + strand, within ECD_02733 at 2875.122 kb on + strand, within ECD_02733 at 2875.122 kb on + strand, within ECD_02733 at 2875.123 kb on - strand, within ECD_02733 at 2875.123 kb on - strand, within ECD_02733 at 2875.123 kb on - strand, within ECD_02733 at 2875.155 kb on + strand, within ECD_02733 at 2875.155 kb on + strand, within ECD_02733 at 2875.155 kb on + strand, within ECD_02733 at 2875.155 kb on + strand, within ECD_02733 at 2875.155 kb on + strand, within ECD_02733 at 2875.155 kb on + strand, within ECD_02733 at 2875.155 kb on + strand, within ECD_02733 at 2875.156 kb on - strand, within ECD_02733 at 2875.156 kb on - strand, within ECD_02733 at 2875.156 kb on - strand, within ECD_02733 at 2875.156 kb on - strand, within ECD_02733 at 2875.156 kb on - strand, within ECD_02733 at 2875.156 kb on - strand, within ECD_02733 at 2875.241 kb on + strand, within ECD_02733 at 2875.241 kb on + strand, within ECD_02733 at 2875.263 kb on + strand, within ECD_02733 at 2875.269 kb on + strand, within ECD_02733 at 2875.269 kb on + strand, within ECD_02733 at 2875.323 kb on + strand, within ECD_02733 at 2875.324 kb on - strand, within ECD_02733 at 2875.353 kb on + strand, within ECD_02733 at 2875.365 kb on + strand, within ECD_02733 at 2875.366 kb on - strand, within ECD_02733 at 2875.366 kb on - strand, within ECD_02733 at 2875.397 kb on + strand, within ECD_02733 at 2875.397 kb on + strand, within ECD_02733 at 2875.397 kb on + strand, within ECD_02733 at 2875.397 kb on + strand, within ECD_02733 at 2875.429 kb on + strand, within ECD_02733 at 2875.430 kb on - strand, within ECD_02733 at 2875.467 kb on + strand, within ECD_02733 at 2875.470 kb on + strand, within ECD_02733 at 2875.470 kb on + strand, within ECD_02733 at 2875.470 kb on + strand, within ECD_02733 at 2875.470 kb on + strand, within ECD_02733 at 2875.470 kb on + strand, within ECD_02733 at 2875.471 kb on - strand, within ECD_02733 at 2875.471 kb on - strand, within ECD_02733 at 2875.548 kb on + strand, within ECD_02733 at 2875.549 kb on - strand, within ECD_02733 at 2875.553 kb on + strand, within ECD_02733 at 2875.553 kb on + strand, within ECD_02733 at 2875.554 kb on - strand, within ECD_02733 at 2875.617 kb on + strand, within ECD_02733 at 2875.618 kb on - strand, within ECD_02733 at 2875.618 kb on - strand, within ECD_02733 at 2875.618 kb on - strand, within ECD_02733 at 2875.626 kb on + strand, within ECD_02733 at 2875.643 kb on + strand, within ECD_02733 at 2875.644 kb on - strand, within ECD_02733 at 2875.668 kb on + strand, within ECD_02733 at 2875.669 kb on - strand, within ECD_02733 at 2875.719 kb on + strand, within ECD_02733 at 2875.719 kb on + strand, within ECD_02733 at 2875.720 kb on - strand, within ECD_02733 at 2875.761 kb on + strand, within ECD_02733 at 2875.761 kb on + strand, within ECD_02733 at 2875.762 kb on - strand, within ECD_02733 at 2875.762 kb on - strand, within ECD_02733 at 2875.785 kb on + strand, within ECD_02733 at 2875.786 kb on - strand, within ECD_02733 at 2875.834 kb on - strand at 2875.853 kb on + strand at 2875.853 kb on + strand at 2875.853 kb on + strand at 2875.854 kb on - strand at 2875.854 kb on - strand at 2875.857 kb on + strand at 2875.857 kb on + strand at 2875.857 kb on + strand at 2875.857 kb on + strand at 2875.857 kb on + strand at 2875.857 kb on + strand at 2875.857 kb on + strand at 2875.858 kb on - strand at 2875.858 kb on - strand at 2875.858 kb on - strand at 2875.866 kb on - strand at 2875.889 kb on + strand at 2875.889 kb on + strand at 2875.889 kb on + strand at 2875.890 kb on - strand at 2875.904 kb on + strand at 2875.904 kb on + strand at 2875.904 kb on + strand at 2875.904 kb on + strand at 2875.916 kb on + strand at 2875.916 kb on + strand at 2875.916 kb on + strand at 2875.916 kb on + strand at 2875.916 kb on + strand at 2875.917 kb on - strand at 2875.917 kb on - strand at 2875.959 kb on + strand at 2875.959 kb on + strand at 2876.058 kb on + strand at 2876.059 kb on - strand at 2876.059 kb on - strand at 2876.059 kb on - strand at 2876.059 kb on - strand at 2876.059 kb on - strand at 2876.068 kb on + strand at 2876.075 kb on + strand at 2876.075 kb on + strand at 2876.075 kb on + strand at 2876.075 kb on + strand at 2876.075 kb on + strand at 2876.076 kb on - strand at 2876.076 kb on - strand at 2876.076 kb on - strand at 2876.193 kb on + strand, within ECD_02734 at 2876.193 kb on + strand, within ECD_02734 at 2876.194 kb on - strand, within ECD_02734 at 2876.194 kb on - strand, within ECD_02734 at 2876.194 kb on - strand, within ECD_02734 at 2876.197 kb on + strand, within ECD_02734 at 2876.198 kb on - strand, within ECD_02734 at 2876.198 kb on - strand, within ECD_02734 at 2876.198 kb on - strand, within ECD_02734 at 2876.198 kb on - strand, within ECD_02734 at 2876.198 kb on - strand, within ECD_02734 at 2876.269 kb on + strand, within ECD_02734 at 2876.269 kb on + strand, within ECD_02734 at 2876.304 kb on + strand, within ECD_02734 at 2876.304 kb on + strand, within ECD_02734 at 2876.304 kb on + strand, within ECD_02734 at 2876.305 kb on - strand, within ECD_02734 at 2876.305 kb on - strand, within ECD_02734 at 2876.305 kb on - strand, within ECD_02734 at 2876.305 kb on - strand, within ECD_02734 at 2876.305 kb on - strand, within ECD_02734 at 2876.305 kb on - strand, within ECD_02734 at 2876.305 kb on - strand, within ECD_02734 at 2876.442 kb on - strand, within ECD_02734 at 2876.625 kb on - strand, within ECD_02734 at 2876.628 kb on - strand, within ECD_02734 at 2876.668 kb on - strand, within ECD_02734 at 2876.684 kb on - strand, within ECD_02734 at 2876.686 kb on - strand, within ECD_02734 at 2876.795 kb on - strand at 2876.795 kb on - strand at 2876.883 kb on + strand at 2876.884 kb on - strand at 2876.888 kb on - strand at 2877.011 kb on + strand at 2877.028 kb on + strand at 2877.028 kb on + strand at 2877.029 kb on - strand at 2877.029 kb on - strand at 2877.035 kb on - strand at 2877.041 kb on + strand at 2877.069 kb on - strand at 2877.079 kb on + strand at 2877.112 kb on + strand at 2877.113 kb on - strand at 2877.138 kb on + strand at 2877.139 kb on - strand at 2877.157 kb on + strand at 2877.158 kb on - strand at 2877.455 kb on + strand, within ECD_02735 at 2877.456 kb on - strand, within ECD_02735 at 2877.489 kb on - strand, within ECD_02735 at 2877.490 kb on + strand, within ECD_02735 at 2877.490 kb on + strand, within ECD_02735 at 2877.490 kb on + strand, within ECD_02735 at 2877.490 kb on + strand, within ECD_02735 at 2877.490 kb on + strand, within ECD_02735 at 2877.490 kb on + strand, within ECD_02735 at 2877.490 kb on + strand, within ECD_02735 at 2877.491 kb on - strand, within ECD_02735 at 2877.491 kb on - strand, within ECD_02735 at 2877.491 kb on - strand, within ECD_02735 at 2877.491 kb on - strand, within ECD_02735 at 2877.527 kb on + strand, within ECD_02735 at 2877.528 kb on - strand, within ECD_02735 at 2877.528 kb on - strand, within ECD_02735 at 2877.528 kb on - strand, within ECD_02735 at 2877.528 kb on - strand, within ECD_02735 at 2877.529 kb on + strand, within ECD_02735 at 2877.529 kb on + strand, within ECD_02735 at 2877.529 kb on + strand, within ECD_02735 at 2877.529 kb on + strand, within ECD_02735 at 2877.529 kb on + strand, within ECD_02735 at 2877.530 kb on - strand, within ECD_02735 at 2877.530 kb on - strand, within ECD_02735 at 2877.530 kb on - strand, within ECD_02735 at 2877.530 kb on - strand, within ECD_02735 at 2877.530 kb on - strand, within ECD_02735 at 2877.530 kb on - strand, within ECD_02735 at 2877.530 kb on - strand, within ECD_02735 at 2877.530 kb on - strand, within ECD_02735 at 2877.530 kb on - strand, within ECD_02735 at 2877.530 kb on - strand, within ECD_02735 at 2877.595 kb on + strand, within ECD_02735 at 2877.596 kb on - strand, within ECD_02735 at 2877.596 kb on - strand, within ECD_02735 at 2877.596 kb on - strand, within ECD_02735 at 2877.596 kb on - strand, within ECD_02735 at 2877.596 kb on - strand, within ECD_02735 at 2877.596 kb on - strand, within ECD_02735 at 2877.690 kb on - strand, within ECD_02735
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1267 remove 2,875,023 + ECD_02733 0.35 +0.5 2,875,023 + ECD_02733 0.35 -0.2 2,875,024 - ECD_02733 0.35 +0.3 2,875,041 + ECD_02733 0.36 -0.1 2,875,041 + ECD_02733 0.36 +0.7 2,875,041 + ECD_02733 0.36 -0.7 2,875,122 + ECD_02733 0.42 -0.9 2,875,122 + ECD_02733 0.42 -0.3 2,875,122 + ECD_02733 0.42 -0.4 2,875,122 + ECD_02733 0.42 -0.1 2,875,122 + ECD_02733 0.42 +0.5 2,875,122 + ECD_02733 0.42 +0.7 2,875,123 - ECD_02733 0.42 -0.2 2,875,123 - ECD_02733 0.42 -0.3 2,875,123 - ECD_02733 0.42 +0.5 2,875,155 + ECD_02733 0.44 -0.6 2,875,155 + ECD_02733 0.44 -0.2 2,875,155 + ECD_02733 0.44 +1.2 2,875,155 + ECD_02733 0.44 +1.4 2,875,155 + ECD_02733 0.44 +0.2 2,875,155 + ECD_02733 0.44 +1.2 2,875,155 + ECD_02733 0.44 +0.6 2,875,156 - ECD_02733 0.44 +0.2 2,875,156 - ECD_02733 0.44 -0.4 2,875,156 - ECD_02733 0.44 +0.4 2,875,156 - ECD_02733 0.44 +0.6 2,875,156 - ECD_02733 0.44 +1.2 2,875,156 - ECD_02733 0.44 -0.3 2,875,241 + ECD_02733 0.50 +1.4 2,875,241 + ECD_02733 0.50 +0.1 2,875,263 + ECD_02733 0.51 -0.7 2,875,269 + ECD_02733 0.52 +0.4 2,875,269 + ECD_02733 0.52 -0.7 2,875,323 + ECD_02733 0.56 +0.8 2,875,324 - ECD_02733 0.56 -2.2 2,875,353 + ECD_02733 0.58 -0.3 2,875,365 + ECD_02733 0.59 +1.1 2,875,366 - ECD_02733 0.59 +0.3 2,875,366 - ECD_02733 0.59 +0.8 2,875,397 + ECD_02733 0.61 +0.1 2,875,397 + ECD_02733 0.61 -0.7 2,875,397 + ECD_02733 0.61 -0.5 2,875,397 + ECD_02733 0.61 -0.3 2,875,429 + ECD_02733 0.63 -1.2 2,875,430 - ECD_02733 0.63 -0.3 2,875,467 + ECD_02733 0.66 +1.0 2,875,470 + ECD_02733 0.66 -0.1 2,875,470 + ECD_02733 0.66 +0.3 2,875,470 + ECD_02733 0.66 +0.3 2,875,470 + ECD_02733 0.66 -0.4 2,875,470 + ECD_02733 0.66 -0.0 2,875,471 - ECD_02733 0.66 -0.2 2,875,471 - ECD_02733 0.66 -0.1 2,875,548 + ECD_02733 0.71 +0.3 2,875,549 - ECD_02733 0.71 -1.3 2,875,553 + ECD_02733 0.72 -0.5 2,875,553 + ECD_02733 0.72 -1.9 2,875,554 - ECD_02733 0.72 -1.6 2,875,617 + ECD_02733 0.76 +1.4 2,875,618 - ECD_02733 0.76 +0.1 2,875,618 - ECD_02733 0.76 +0.1 2,875,618 - ECD_02733 0.76 +1.2 2,875,626 + ECD_02733 0.77 +0.8 2,875,643 + ECD_02733 0.78 +0.0 2,875,644 - ECD_02733 0.78 -1.2 2,875,668 + ECD_02733 0.80 -0.8 2,875,669 - ECD_02733 0.80 +0.9 2,875,719 + ECD_02733 0.83 -1.9 2,875,719 + ECD_02733 0.83 -1.9 2,875,720 - ECD_02733 0.83 -1.0 2,875,761 + ECD_02733 0.86 +0.2 2,875,761 + ECD_02733 0.86 +0.8 2,875,762 - ECD_02733 0.86 -1.3 2,875,762 - ECD_02733 0.86 +0.2 2,875,785 + ECD_02733 0.88 +0.5 2,875,786 - ECD_02733 0.88 +0.0 2,875,834 - -0.5 2,875,853 + -0.9 2,875,853 + +0.4 2,875,853 + -0.2 2,875,854 - +0.0 2,875,854 - +0.5 2,875,857 + +1.3 2,875,857 + -0.0 2,875,857 + -0.6 2,875,857 + +2.3 2,875,857 + -0.4 2,875,857 + +0.3 2,875,857 + -0.1 2,875,858 - +0.3 2,875,858 - -0.3 2,875,858 - +0.1 2,875,866 - -0.3 2,875,889 + +0.2 2,875,889 + -0.6 2,875,889 + +0.2 2,875,890 - +0.4 2,875,904 + -0.8 2,875,904 + -0.6 2,875,904 + +0.1 2,875,904 + +2.2 2,875,916 + +0.6 2,875,916 + +0.1 2,875,916 + +0.7 2,875,916 + +0.3 2,875,916 + +0.6 2,875,917 - +0.6 2,875,917 - -1.6 2,875,959 + -0.4 2,875,959 + +0.8 2,876,058 + -1.1 2,876,059 - -0.4 2,876,059 - -0.1 2,876,059 - +2.0 2,876,059 - +1.7 2,876,059 - +0.4 2,876,068 + +1.2 2,876,075 + +1.4 2,876,075 + +0.1 2,876,075 + -0.5 2,876,075 + -1.2 2,876,075 + +0.1 2,876,076 - -2.8 2,876,076 - +0.4 2,876,076 - +0.2 2,876,193 + ECD_02734 0.24 -1.2 2,876,193 + ECD_02734 0.24 -0.9 2,876,194 - ECD_02734 0.24 -0.7 2,876,194 - ECD_02734 0.24 -0.6 2,876,194 - ECD_02734 0.24 -0.2 2,876,197 + ECD_02734 0.24 -0.2 2,876,198 - ECD_02734 0.24 -1.5 2,876,198 - ECD_02734 0.24 -0.3 2,876,198 - ECD_02734 0.24 +0.0 2,876,198 - ECD_02734 0.24 +0.4 2,876,198 - ECD_02734 0.24 -1.0 2,876,269 + ECD_02734 0.34 -0.3 2,876,269 + ECD_02734 0.34 +1.0 2,876,304 + ECD_02734 0.38 +0.4 2,876,304 + ECD_02734 0.38 +0.1 2,876,304 + ECD_02734 0.38 -0.6 2,876,305 - ECD_02734 0.39 +0.1 2,876,305 - ECD_02734 0.39 +0.0 2,876,305 - ECD_02734 0.39 +0.7 2,876,305 - ECD_02734 0.39 +0.4 2,876,305 - ECD_02734 0.39 +0.2 2,876,305 - ECD_02734 0.39 -1.4 2,876,305 - ECD_02734 0.39 -0.8 2,876,442 - ECD_02734 0.57 -0.1 2,876,625 - ECD_02734 0.82 +0.8 2,876,628 - ECD_02734 0.82 -0.6 2,876,668 - ECD_02734 0.87 -0.7 2,876,684 - ECD_02734 0.90 -1.0 2,876,686 - ECD_02734 0.90 +0.6 2,876,795 - +0.3 2,876,795 - -0.2 2,876,883 + -0.5 2,876,884 - -0.1 2,876,888 - +0.4 2,877,011 + -0.4 2,877,028 + -0.2 2,877,028 + +0.0 2,877,029 - -0.6 2,877,029 - +0.6 2,877,035 - +0.2 2,877,041 + +0.0 2,877,069 - -0.1 2,877,079 + -0.6 2,877,112 + -1.2 2,877,113 - -1.5 2,877,138 + -0.4 2,877,139 - -1.6 2,877,157 + -0.5 2,877,158 - -0.3 2,877,455 + ECD_02735 0.15 -0.4 2,877,456 - ECD_02735 0.15 +0.4 2,877,489 - ECD_02735 0.16 +0.5 2,877,490 + ECD_02735 0.16 +1.1 2,877,490 + ECD_02735 0.16 -0.5 2,877,490 + ECD_02735 0.16 -0.4 2,877,490 + ECD_02735 0.16 -0.3 2,877,490 + ECD_02735 0.16 +0.4 2,877,490 + ECD_02735 0.16 +0.4 2,877,490 + ECD_02735 0.16 -1.2 2,877,491 - ECD_02735 0.16 +0.1 2,877,491 - ECD_02735 0.16 -1.2 2,877,491 - ECD_02735 0.16 -1.9 2,877,491 - ECD_02735 0.16 +0.2 2,877,527 + ECD_02735 0.17 -0.7 2,877,528 - ECD_02735 0.17 +0.4 2,877,528 - ECD_02735 0.17 +1.4 2,877,528 - ECD_02735 0.17 +0.4 2,877,528 - ECD_02735 0.17 -0.3 2,877,529 + ECD_02735 0.17 +1.6 2,877,529 + ECD_02735 0.17 -0.8 2,877,529 + ECD_02735 0.17 +0.0 2,877,529 + ECD_02735 0.17 +0.4 2,877,529 + ECD_02735 0.17 +0.1 2,877,530 - ECD_02735 0.18 +0.4 2,877,530 - ECD_02735 0.18 +0.2 2,877,530 - ECD_02735 0.18 -0.4 2,877,530 - ECD_02735 0.18 +1.2 2,877,530 - ECD_02735 0.18 +0.0 2,877,530 - ECD_02735 0.18 -0.2 2,877,530 - ECD_02735 0.18 -0.9 2,877,530 - ECD_02735 0.18 -0.2 2,877,530 - ECD_02735 0.18 -0.3 2,877,530 - ECD_02735 0.18 -1.0 2,877,595 + ECD_02735 0.20 -0.8 2,877,596 - ECD_02735 0.20 +0.1 2,877,596 - ECD_02735 0.20 -0.6 2,877,596 - ECD_02735 0.20 +0.4 2,877,596 - ECD_02735 0.20 -1.6 2,877,596 - ECD_02735 0.20 -0.6 2,877,596 - ECD_02735 0.20 +0.0 2,877,690 - ECD_02735 0.23 -0.4
Or see this region's nucleotide sequence