Experiment: Laval1267
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02468 and ECD_02469 overlap by 16 nucleotides ECD_02469 and ECD_02470 are separated by 131 nucleotides ECD_02470 and ECD_02471 are separated by 208 nucleotides
ECD_02468: ECD_02468 - quinolinate synthase, L-aspartate oxidase (B protein) subunit, at 2,577,020 to 2,578,642
_02468
ECD_02469: ECD_02469 - tRNA1(Val) (adenine(37)-N6)-methyltransferase, at 2,578,627 to 2,579,364
_02469
ECD_02470: ECD_02470 - ATP-dependent RNA helicase, at 2,579,496 to 2,580,830
_02470
ECD_02471: ECD_02471 - putative DNA-binding transcriptional regulator, at 2,581,039 to 2,581,920
_02471
Position (kb)
2579
2580
2581 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2578.628 kb on + strand at 2578.629 kb on - strand at 2578.629 kb on - strand at 2578.629 kb on - strand at 2578.629 kb on - strand at 2578.629 kb on - strand at 2578.632 kb on + strand at 2578.632 kb on + strand at 2578.633 kb on - strand at 2578.641 kb on - strand at 2578.641 kb on - strand at 2578.801 kb on + strand, within ECD_02469 at 2578.820 kb on - strand, within ECD_02469 at 2578.843 kb on - strand, within ECD_02469 at 2578.933 kb on - strand, within ECD_02469 at 2578.938 kb on + strand, within ECD_02469 at 2578.939 kb on - strand, within ECD_02469 at 2578.939 kb on - strand, within ECD_02469 at 2578.991 kb on + strand, within ECD_02469 at 2578.991 kb on + strand, within ECD_02469 at 2578.992 kb on - strand, within ECD_02469 at 2578.992 kb on - strand, within ECD_02469 at 2578.992 kb on - strand, within ECD_02469 at 2578.992 kb on - strand, within ECD_02469 at 2579.012 kb on - strand, within ECD_02469 at 2579.024 kb on - strand, within ECD_02469 at 2579.230 kb on + strand, within ECD_02469 at 2579.265 kb on + strand, within ECD_02469 at 2579.352 kb on + strand at 2579.353 kb on - strand at 2579.353 kb on - strand at 2579.490 kb on + strand at 2579.801 kb on + strand, within ECD_02470 at 2579.841 kb on + strand, within ECD_02470 at 2579.841 kb on + strand, within ECD_02470 at 2579.841 kb on + strand, within ECD_02470 at 2579.842 kb on - strand, within ECD_02470 at 2579.844 kb on - strand, within ECD_02470 at 2579.913 kb on + strand, within ECD_02470 at 2579.913 kb on + strand, within ECD_02470 at 2579.914 kb on - strand, within ECD_02470 at 2579.914 kb on - strand, within ECD_02470 at 2579.914 kb on - strand, within ECD_02470 at 2579.978 kb on + strand, within ECD_02470 at 2579.979 kb on - strand, within ECD_02470 at 2580.014 kb on + strand, within ECD_02470 at 2580.014 kb on + strand, within ECD_02470 at 2580.324 kb on + strand, within ECD_02470 at 2580.486 kb on - strand, within ECD_02470 at 2580.490 kb on - strand, within ECD_02470 at 2580.631 kb on + strand, within ECD_02470 at 2580.846 kb on + strand at 2581.010 kb on - strand at 2581.265 kb on - strand, within ECD_02471 at 2581.265 kb on - strand, within ECD_02471 at 2581.265 kb on - strand, within ECD_02471 at 2581.265 kb on - strand, within ECD_02471 at 2581.266 kb on + strand, within ECD_02471 at 2581.267 kb on - strand, within ECD_02471 at 2581.267 kb on - strand, within ECD_02471 at 2581.267 kb on - strand, within ECD_02471 at 2581.363 kb on - strand, within ECD_02471 at 2581.372 kb on - strand, within ECD_02471 at 2581.485 kb on - strand, within ECD_02471 at 2581.485 kb on - strand, within ECD_02471 at 2581.536 kb on - strand, within ECD_02471 at 2581.716 kb on - strand, within ECD_02471 at 2581.781 kb on - strand, within ECD_02471
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1267 remove 2,578,628 + -0.9 2,578,629 - +0.1 2,578,629 - +0.2 2,578,629 - +0.5 2,578,629 - +0.8 2,578,629 - +0.2 2,578,632 + -0.1 2,578,632 + +0.9 2,578,633 - -0.3 2,578,641 - +0.8 2,578,641 - +0.2 2,578,801 + ECD_02469 0.24 -0.6 2,578,820 - ECD_02469 0.26 +1.1 2,578,843 - ECD_02469 0.29 +0.2 2,578,933 - ECD_02469 0.41 -0.0 2,578,938 + ECD_02469 0.42 -0.5 2,578,939 - ECD_02469 0.42 -0.0 2,578,939 - ECD_02469 0.42 -0.2 2,578,991 + ECD_02469 0.49 +0.1 2,578,991 + ECD_02469 0.49 -0.9 2,578,992 - ECD_02469 0.49 +0.6 2,578,992 - ECD_02469 0.49 -0.2 2,578,992 - ECD_02469 0.49 +2.7 2,578,992 - ECD_02469 0.49 +0.1 2,579,012 - ECD_02469 0.52 -0.6 2,579,024 - ECD_02469 0.54 +0.6 2,579,230 + ECD_02469 0.82 -0.1 2,579,265 + ECD_02469 0.86 -1.0 2,579,352 + +0.1 2,579,353 - -1.8 2,579,353 - +0.3 2,579,490 + -0.4 2,579,801 + ECD_02470 0.23 -2.2 2,579,841 + ECD_02470 0.26 -0.2 2,579,841 + ECD_02470 0.26 -1.6 2,579,841 + ECD_02470 0.26 -1.9 2,579,842 - ECD_02470 0.26 +0.4 2,579,844 - ECD_02470 0.26 -0.6 2,579,913 + ECD_02470 0.31 -0.6 2,579,913 + ECD_02470 0.31 -1.5 2,579,914 - ECD_02470 0.31 -2.2 2,579,914 - ECD_02470 0.31 -0.9 2,579,914 - ECD_02470 0.31 -2.8 2,579,978 + ECD_02470 0.36 -1.0 2,579,979 - ECD_02470 0.36 -0.6 2,580,014 + ECD_02470 0.39 -0.9 2,580,014 + ECD_02470 0.39 -1.7 2,580,324 + ECD_02470 0.62 -2.1 2,580,486 - ECD_02470 0.74 -1.6 2,580,490 - ECD_02470 0.74 -1.2 2,580,631 + ECD_02470 0.85 -0.0 2,580,846 + -0.5 2,581,010 - +0.8 2,581,265 - ECD_02471 0.26 +0.7 2,581,265 - ECD_02471 0.26 +0.0 2,581,265 - ECD_02471 0.26 -0.1 2,581,265 - ECD_02471 0.26 +0.9 2,581,266 + ECD_02471 0.26 -0.9 2,581,267 - ECD_02471 0.26 -0.6 2,581,267 - ECD_02471 0.26 +0.7 2,581,267 - ECD_02471 0.26 -0.1 2,581,363 - ECD_02471 0.37 -0.2 2,581,372 - ECD_02471 0.38 -1.0 2,581,485 - ECD_02471 0.51 +0.2 2,581,485 - ECD_02471 0.51 +0.1 2,581,536 - ECD_02471 0.56 +0.4 2,581,716 - ECD_02471 0.77 +0.4 2,581,781 - ECD_02471 0.84 -0.5
Or see this region's nucleotide sequence