Strain Fitness in Escherichia coli BL21 around ECD_02322

Experiment: Laval1267

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02321 and ECD_02322 are separated by 133 nucleotidesECD_02322 and ECD_02323 overlap by 11 nucleotidesECD_02323 and ECD_02324 overlap by 1 nucleotides ECD_02321: ECD_02321 - cysteine synthase B (O-acetylserine sulfhydrolase B), at 2,411,075 to 2,411,986 _02321 ECD_02322: ECD_02322 - sulfate/thiosulfate transporter subunit, at 2,412,120 to 2,413,217 _02322 ECD_02323: ECD_02323 - sulfate/thiosulfate ABC transporter permease, at 2,413,207 to 2,414,082 _02323 ECD_02324: ECD_02324 - sulfate/thiosulfate ABC transporter permease, at 2,414,082 to 2,414,915 _02324 Position (kb) 2412 2413 2414Strain fitness (log2 ratio) -2 -1 0 1at 2411.131 kb on - strandat 2411.131 kb on - strandat 2411.159 kb on + strandat 2411.180 kb on - strand, within ECD_02321at 2411.237 kb on + strand, within ECD_02321at 2411.528 kb on - strand, within ECD_02321at 2411.536 kb on - strand, within ECD_02321at 2411.957 kb on - strandat 2411.957 kb on - strandat 2411.976 kb on - strandat 2411.976 kb on - strandat 2411.976 kb on - strandat 2411.976 kb on - strandat 2411.981 kb on - strandat 2412.000 kb on - strandat 2412.035 kb on - strandat 2412.044 kb on - strandat 2412.118 kb on + strandat 2412.181 kb on + strandat 2412.272 kb on - strand, within ECD_02322at 2412.304 kb on + strand, within ECD_02322at 2412.375 kb on - strand, within ECD_02322at 2412.429 kb on - strand, within ECD_02322at 2412.547 kb on - strand, within ECD_02322at 2412.598 kb on - strand, within ECD_02322at 2412.598 kb on - strand, within ECD_02322at 2412.954 kb on - strand, within ECD_02322at 2413.044 kb on - strand, within ECD_02322at 2413.194 kb on - strandat 2413.194 kb on - strandat 2413.194 kb on - strandat 2413.194 kb on - strandat 2413.197 kb on - strandat 2413.294 kb on - strandat 2413.500 kb on + strand, within ECD_02323at 2413.573 kb on + strand, within ECD_02323at 2413.574 kb on - strand, within ECD_02323at 2413.656 kb on + strand, within ECD_02323at 2413.668 kb on + strand, within ECD_02323at 2413.669 kb on - strand, within ECD_02323at 2413.721 kb on + strand, within ECD_02323at 2413.721 kb on + strand, within ECD_02323at 2413.722 kb on - strand, within ECD_02323at 2413.722 kb on - strand, within ECD_02323at 2413.965 kb on - strand, within ECD_02323at 2414.092 kb on - strandat 2414.092 kb on - strandat 2414.127 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1267
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2,411,131 - -0.5
2,411,131 - +0.5
2,411,159 + +0.8
2,411,180 - ECD_02321 0.12 -1.7
2,411,237 + ECD_02321 0.18 -0.3
2,411,528 - ECD_02321 0.50 +0.8
2,411,536 - ECD_02321 0.51 -1.0
2,411,957 - +0.2
2,411,957 - +0.1
2,411,976 - -0.8
2,411,976 - -1.8
2,411,976 - +0.9
2,411,976 - +0.8
2,411,981 - +0.2
2,412,000 - +0.5
2,412,035 - +0.5
2,412,044 - +0.1
2,412,118 + +0.3
2,412,181 + -1.3
2,412,272 - ECD_02322 0.14 +0.9
2,412,304 + ECD_02322 0.17 +0.7
2,412,375 - ECD_02322 0.23 +0.9
2,412,429 - ECD_02322 0.28 -0.5
2,412,547 - ECD_02322 0.39 -0.8
2,412,598 - ECD_02322 0.44 +0.1
2,412,598 - ECD_02322 0.44 +0.2
2,412,954 - ECD_02322 0.76 +0.9
2,413,044 - ECD_02322 0.84 +1.7
2,413,194 - +0.5
2,413,194 - +0.1
2,413,194 - +0.1
2,413,194 - -0.1
2,413,197 - -1.1
2,413,294 - +0.1
2,413,500 + ECD_02323 0.33 +0.3
2,413,573 + ECD_02323 0.42 -0.6
2,413,574 - ECD_02323 0.42 -0.1
2,413,656 + ECD_02323 0.51 -0.8
2,413,668 + ECD_02323 0.53 -0.5
2,413,669 - ECD_02323 0.53 -1.1
2,413,721 + ECD_02323 0.59 +0.7
2,413,721 + ECD_02323 0.59 +0.4
2,413,722 - ECD_02323 0.59 -0.2
2,413,722 - ECD_02323 0.59 -0.0
2,413,965 - ECD_02323 0.87 +0.2
2,414,092 - +0.2
2,414,092 - -0.8
2,414,127 - +0.5

Or see this region's nucleotide sequence