Experiment: Laval1267
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02321 and ECD_02322 are separated by 133 nucleotides ECD_02322 and ECD_02323 overlap by 11 nucleotides ECD_02323 and ECD_02324 overlap by 1 nucleotides
ECD_02321: ECD_02321 - cysteine synthase B (O-acetylserine sulfhydrolase B), at 2,411,075 to 2,411,986
_02321
ECD_02322: ECD_02322 - sulfate/thiosulfate transporter subunit, at 2,412,120 to 2,413,217
_02322
ECD_02323: ECD_02323 - sulfate/thiosulfate ABC transporter permease, at 2,413,207 to 2,414,082
_02323
ECD_02324: ECD_02324 - sulfate/thiosulfate ABC transporter permease, at 2,414,082 to 2,414,915
_02324
Position (kb)
2412
2413
2414 Strain fitness (log2 ratio)
-2
-1
0
1 at 2411.131 kb on - strand at 2411.131 kb on - strand at 2411.159 kb on + strand at 2411.180 kb on - strand, within ECD_02321 at 2411.237 kb on + strand, within ECD_02321 at 2411.528 kb on - strand, within ECD_02321 at 2411.536 kb on - strand, within ECD_02321 at 2411.957 kb on - strand at 2411.957 kb on - strand at 2411.976 kb on - strand at 2411.976 kb on - strand at 2411.976 kb on - strand at 2411.976 kb on - strand at 2411.981 kb on - strand at 2412.000 kb on - strand at 2412.035 kb on - strand at 2412.044 kb on - strand at 2412.118 kb on + strand at 2412.181 kb on + strand at 2412.272 kb on - strand, within ECD_02322 at 2412.304 kb on + strand, within ECD_02322 at 2412.375 kb on - strand, within ECD_02322 at 2412.429 kb on - strand, within ECD_02322 at 2412.547 kb on - strand, within ECD_02322 at 2412.598 kb on - strand, within ECD_02322 at 2412.598 kb on - strand, within ECD_02322 at 2412.954 kb on - strand, within ECD_02322 at 2413.044 kb on - strand, within ECD_02322 at 2413.194 kb on - strand at 2413.194 kb on - strand at 2413.194 kb on - strand at 2413.194 kb on - strand at 2413.197 kb on - strand at 2413.294 kb on - strand at 2413.500 kb on + strand, within ECD_02323 at 2413.573 kb on + strand, within ECD_02323 at 2413.574 kb on - strand, within ECD_02323 at 2413.656 kb on + strand, within ECD_02323 at 2413.668 kb on + strand, within ECD_02323 at 2413.669 kb on - strand, within ECD_02323 at 2413.721 kb on + strand, within ECD_02323 at 2413.721 kb on + strand, within ECD_02323 at 2413.722 kb on - strand, within ECD_02323 at 2413.722 kb on - strand, within ECD_02323 at 2413.965 kb on - strand, within ECD_02323 at 2414.092 kb on - strand at 2414.092 kb on - strand at 2414.127 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1267 remove 2,411,131 - -0.5 2,411,131 - +0.5 2,411,159 + +0.8 2,411,180 - ECD_02321 0.12 -1.7 2,411,237 + ECD_02321 0.18 -0.3 2,411,528 - ECD_02321 0.50 +0.8 2,411,536 - ECD_02321 0.51 -1.0 2,411,957 - +0.2 2,411,957 - +0.1 2,411,976 - -0.8 2,411,976 - -1.8 2,411,976 - +0.9 2,411,976 - +0.8 2,411,981 - +0.2 2,412,000 - +0.5 2,412,035 - +0.5 2,412,044 - +0.1 2,412,118 + +0.3 2,412,181 + -1.3 2,412,272 - ECD_02322 0.14 +0.9 2,412,304 + ECD_02322 0.17 +0.7 2,412,375 - ECD_02322 0.23 +0.9 2,412,429 - ECD_02322 0.28 -0.5 2,412,547 - ECD_02322 0.39 -0.8 2,412,598 - ECD_02322 0.44 +0.1 2,412,598 - ECD_02322 0.44 +0.2 2,412,954 - ECD_02322 0.76 +0.9 2,413,044 - ECD_02322 0.84 +1.7 2,413,194 - +0.5 2,413,194 - +0.1 2,413,194 - +0.1 2,413,194 - -0.1 2,413,197 - -1.1 2,413,294 - +0.1 2,413,500 + ECD_02323 0.33 +0.3 2,413,573 + ECD_02323 0.42 -0.6 2,413,574 - ECD_02323 0.42 -0.1 2,413,656 + ECD_02323 0.51 -0.8 2,413,668 + ECD_02323 0.53 -0.5 2,413,669 - ECD_02323 0.53 -1.1 2,413,721 + ECD_02323 0.59 +0.7 2,413,721 + ECD_02323 0.59 +0.4 2,413,722 - ECD_02323 0.59 -0.2 2,413,722 - ECD_02323 0.59 -0.0 2,413,965 - ECD_02323 0.87 +0.2 2,414,092 - +0.2 2,414,092 - -0.8 2,414,127 - +0.5
Or see this region's nucleotide sequence