Experiment: Laval1267
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00272 and ECD_00273 are separated by 91 nucleotides ECD_00273 and ECD_00274 are separated by 257 nucleotides ECD_00274 and ECD_00275 are separated by 39 nucleotides
ECD_00272: ECD_00272 - putative DNA-bindng transcriptional regulator, at 303,129 to 304,061
_00272
ECD_00273: ECD_00273 - putative inner membrane protein, at 304,153 to 304,650
_00273
ECD_00274: ECD_00274 - ankyrin repeat protein, at 304,908 to 305,513
_00274
ECD_00275: ECD_00275 - DUF2877 family protein, at 305,553 to 306,416
_00275
Position (kb) 304
305 Strain fitness (log2 ratio) -1
0
1 at 303.243 kb on + strand, within ECD_00272 at 303.244 kb on - strand, within ECD_00272 at 303.462 kb on - strand, within ECD_00272 at 303.464 kb on + strand, within ECD_00272 at 303.465 kb on - strand, within ECD_00272 at 303.467 kb on + strand, within ECD_00272 at 303.571 kb on + strand, within ECD_00272 at 303.572 kb on - strand, within ECD_00272 at 303.632 kb on + strand, within ECD_00272 at 303.783 kb on + strand, within ECD_00272 at 303.784 kb on - strand, within ECD_00272 at 303.784 kb on - strand, within ECD_00272 at 303.797 kb on + strand, within ECD_00272 at 303.935 kb on + strand, within ECD_00272 at 303.949 kb on + strand, within ECD_00272 at 303.950 kb on - strand, within ECD_00272 at 303.950 kb on - strand, within ECD_00272 at 303.950 kb on - strand, within ECD_00272 at 303.950 kb on - strand, within ECD_00272 at 304.103 kb on - strand at 304.348 kb on + strand, within ECD_00273 at 304.371 kb on + strand, within ECD_00273 at 304.406 kb on - strand, within ECD_00273 at 304.406 kb on - strand, within ECD_00273 at 304.690 kb on + strand at 304.691 kb on - strand at 304.691 kb on - strand at 304.704 kb on - strand at 304.705 kb on + strand at 304.935 kb on + strand at 305.006 kb on + strand, within ECD_00274 at 305.170 kb on + strand, within ECD_00274 at 305.270 kb on - strand, within ECD_00274 at 305.433 kb on + strand, within ECD_00274 at 305.511 kb on + strand at 305.511 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Laval1267 remove 303,243 + ECD_00272 0.12 +0.1 303,244 - ECD_00272 0.12 +1.1 303,462 - ECD_00272 0.36 +0.2 303,464 + ECD_00272 0.36 +0.8 303,465 - ECD_00272 0.36 -0.5 303,467 + ECD_00272 0.36 +0.9 303,571 + ECD_00272 0.47 +0.6 303,572 - ECD_00272 0.47 -0.4 303,632 + ECD_00272 0.54 -0.1 303,783 + ECD_00272 0.70 +0.4 303,784 - ECD_00272 0.70 +0.6 303,784 - ECD_00272 0.70 -0.5 303,797 + ECD_00272 0.72 -1.0 303,935 + ECD_00272 0.86 +0.7 303,949 + ECD_00272 0.88 +1.0 303,950 - ECD_00272 0.88 +1.0 303,950 - ECD_00272 0.88 +0.4 303,950 - ECD_00272 0.88 +0.2 303,950 - ECD_00272 0.88 +0.3 304,103 - -0.1 304,348 + ECD_00273 0.39 +0.0 304,371 + ECD_00273 0.44 +0.2 304,406 - ECD_00273 0.51 +0.6 304,406 - ECD_00273 0.51 +0.3 304,690 + +0.5 304,691 - -0.3 304,691 - +0.9 304,704 - -0.5 304,705 + -0.2 304,935 + -0.0 305,006 + ECD_00274 0.16 -0.4 305,170 + ECD_00274 0.43 +0.3 305,270 - ECD_00274 0.60 -0.0 305,433 + ECD_00274 0.87 -0.4 305,511 + +0.5 305,511 + -0.8
Or see this region's nucleotide sequence