Strain Fitness in Escherichia coli BL21 around ECD_02926

Experiment: EV152

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02924 and ECD_02925 are separated by 241 nucleotidesECD_02925 and ECD_02926 are separated by 63 nucleotidesECD_02926 and ECD_02927 are separated by 162 nucleotides ECD_02924: ECD_02924 - inorganic triphosphatase, at 3,065,763 to 3,067,064 _02924 ECD_02925: ECD_02925 - SH3 domain protein, at 3,067,306 to 3,067,926 _02925 ECD_02926: ECD_02926 - fused tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase and phosphatase, at 3,067,990 to 3,069,228 _02926 ECD_02927: ECD_02927 - undecaprenyl pyrophosphate phosphatase, at 3,069,391 to 3,070,212 _02927 Position (kb) 3067 3068 3069 3070Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 3066.993 kb on - strandat 3067.032 kb on - strandat 3067.038 kb on - strandat 3067.071 kb on + strandat 3067.072 kb on - strandat 3067.091 kb on + strandat 3067.091 kb on + strandat 3067.091 kb on + strandat 3067.092 kb on - strandat 3067.092 kb on - strandat 3067.092 kb on - strandat 3067.092 kb on - strandat 3067.092 kb on - strandat 3067.092 kb on - strandat 3067.092 kb on - strandat 3067.092 kb on - strandat 3067.092 kb on - strandat 3067.135 kb on + strandat 3067.136 kb on - strandat 3067.136 kb on - strandat 3067.136 kb on - strandat 3067.140 kb on - strandat 3067.140 kb on - strandat 3067.142 kb on + strandat 3067.143 kb on - strandat 3067.143 kb on - strandat 3067.185 kb on + strandat 3067.267 kb on + strandat 3067.268 kb on - strandat 3067.332 kb on - strandat 3067.404 kb on + strand, within ECD_02925at 3067.405 kb on - strand, within ECD_02925at 3067.405 kb on - strand, within ECD_02925at 3067.435 kb on + strand, within ECD_02925at 3067.478 kb on + strand, within ECD_02925at 3067.478 kb on + strand, within ECD_02925at 3067.478 kb on + strand, within ECD_02925at 3067.481 kb on + strand, within ECD_02925at 3067.504 kb on + strand, within ECD_02925at 3067.504 kb on + strand, within ECD_02925at 3067.504 kb on + strand, within ECD_02925at 3067.561 kb on - strand, within ECD_02925at 3067.561 kb on - strand, within ECD_02925at 3067.561 kb on - strand, within ECD_02925at 3067.561 kb on - strand, within ECD_02925at 3067.561 kb on - strand, within ECD_02925at 3067.626 kb on + strand, within ECD_02925at 3067.639 kb on - strand, within ECD_02925at 3067.784 kb on + strand, within ECD_02925at 3067.827 kb on + strand, within ECD_02925at 3067.827 kb on + strand, within ECD_02925at 3067.827 kb on + strand, within ECD_02925at 3067.827 kb on + strand, within ECD_02925at 3067.827 kb on + strand, within ECD_02925at 3067.827 kb on + strand, within ECD_02925at 3067.828 kb on - strand, within ECD_02925at 3067.828 kb on - strand, within ECD_02925at 3067.831 kb on + strand, within ECD_02925at 3067.831 kb on + strand, within ECD_02925at 3067.831 kb on + strand, within ECD_02925at 3067.832 kb on - strand, within ECD_02925at 3067.832 kb on - strand, within ECD_02925at 3067.832 kb on - strand, within ECD_02925at 3067.925 kb on - strandat 3067.952 kb on - strandat 3067.952 kb on - strandat 3067.952 kb on - strandat 3067.954 kb on + strandat 3067.957 kb on + strandat 3067.957 kb on + strandat 3067.957 kb on + strandat 3067.968 kb on + strandat 3067.968 kb on + strandat 3069.232 kb on + strandat 3069.232 kb on + strandat 3069.239 kb on - strandat 3069.407 kb on + strandat 3069.408 kb on - strandat 3069.408 kb on - strandat 3069.408 kb on - strandat 3069.427 kb on - strandat 3069.738 kb on + strand, within ECD_02927at 3069.739 kb on - strand, within ECD_02927at 3069.752 kb on + strand, within ECD_02927at 3069.753 kb on - strand, within ECD_02927at 3069.753 kb on - strand, within ECD_02927at 3069.760 kb on - strand, within ECD_02927at 3069.843 kb on - strand, within ECD_02927at 3069.843 kb on - strand, within ECD_02927at 3069.853 kb on + strand, within ECD_02927at 3069.873 kb on + strand, within ECD_02927at 3069.874 kb on - strand, within ECD_02927at 3070.031 kb on - strand, within ECD_02927at 3070.031 kb on - strand, within ECD_02927at 3070.034 kb on - strand, within ECD_02927at 3070.122 kb on + strand, within ECD_02927at 3070.123 kb on - strand, within ECD_02927at 3070.178 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction EV152
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3,066,993 - -0.9
3,067,032 - -0.1
3,067,038 - -0.0
3,067,071 + +0.1
3,067,072 - +1.0
3,067,091 + +0.0
3,067,091 + -1.7
3,067,091 + -0.4
3,067,092 - +0.7
3,067,092 - +0.8
3,067,092 - -0.3
3,067,092 - +0.8
3,067,092 - -0.4
3,067,092 - +0.2
3,067,092 - -1.9
3,067,092 - -0.3
3,067,092 - -0.4
3,067,135 + -0.3
3,067,136 - -0.1
3,067,136 - +0.1
3,067,136 - +0.7
3,067,140 - +0.7
3,067,140 - -1.0
3,067,142 + -0.5
3,067,143 - +1.7
3,067,143 - +0.2
3,067,185 + +0.8
3,067,267 + -1.1
3,067,268 - +0.4
3,067,332 - +0.1
3,067,404 + ECD_02925 0.16 -0.9
3,067,405 - ECD_02925 0.16 +0.3
3,067,405 - ECD_02925 0.16 +0.7
3,067,435 + ECD_02925 0.21 -0.4
3,067,478 + ECD_02925 0.28 -0.0
3,067,478 + ECD_02925 0.28 -0.8
3,067,478 + ECD_02925 0.28 +0.7
3,067,481 + ECD_02925 0.28 -0.5
3,067,504 + ECD_02925 0.32 -0.3
3,067,504 + ECD_02925 0.32 -0.3
3,067,504 + ECD_02925 0.32 +0.6
3,067,561 - ECD_02925 0.41 +0.4
3,067,561 - ECD_02925 0.41 -0.3
3,067,561 - ECD_02925 0.41 +0.4
3,067,561 - ECD_02925 0.41 -0.3
3,067,561 - ECD_02925 0.41 -0.2
3,067,626 + ECD_02925 0.52 +0.7
3,067,639 - ECD_02925 0.54 -0.1
3,067,784 + ECD_02925 0.77 -0.3
3,067,827 + ECD_02925 0.84 +0.4
3,067,827 + ECD_02925 0.84 +1.6
3,067,827 + ECD_02925 0.84 -0.1
3,067,827 + ECD_02925 0.84 +0.3
3,067,827 + ECD_02925 0.84 -0.4
3,067,827 + ECD_02925 0.84 +0.7
3,067,828 - ECD_02925 0.84 -0.0
3,067,828 - ECD_02925 0.84 -0.9
3,067,831 + ECD_02925 0.85 -0.2
3,067,831 + ECD_02925 0.85 +0.1
3,067,831 + ECD_02925 0.85 +0.1
3,067,832 - ECD_02925 0.85 +0.2
3,067,832 - ECD_02925 0.85 -0.6
3,067,832 - ECD_02925 0.85 -0.2
3,067,925 - +0.0
3,067,952 - -1.0
3,067,952 - +1.1
3,067,952 - -0.4
3,067,954 + -0.3
3,067,957 + -0.4
3,067,957 + -0.2
3,067,957 + -0.3
3,067,968 + -0.4
3,067,968 + +1.0
3,069,232 + -0.3
3,069,232 + +0.4
3,069,239 - -0.7
3,069,407 + +0.7
3,069,408 - -1.3
3,069,408 - -4.2
3,069,408 - -2.1
3,069,427 - -3.7
3,069,738 + ECD_02927 0.42 -1.6
3,069,739 - ECD_02927 0.42 +0.1
3,069,752 + ECD_02927 0.44 -0.8
3,069,753 - ECD_02927 0.44 -0.9
3,069,753 - ECD_02927 0.44 -1.3
3,069,760 - ECD_02927 0.45 -2.5
3,069,843 - ECD_02927 0.55 -2.0
3,069,843 - ECD_02927 0.55 -2.2
3,069,853 + ECD_02927 0.56 +0.1
3,069,873 + ECD_02927 0.59 -1.3
3,069,874 - ECD_02927 0.59 -2.2
3,070,031 - ECD_02927 0.78 -2.8
3,070,031 - ECD_02927 0.78 -0.7
3,070,034 - ECD_02927 0.78 -1.9
3,070,122 + ECD_02927 0.89 -3.0
3,070,123 - ECD_02927 0.89 -2.2
3,070,178 - -3.6

Or see this region's nucleotide sequence