Strain Fitness in Escherichia coli BL21 around ECD_01753

Experiment: EV152

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01752 and ECD_01753 are separated by 112 nucleotidesECD_01753 and ECD_01754 are separated by 146 nucleotides ECD_01752: ECD_01752 - protein kinase, endogenous substrate unidentified; autokinase, at 1,811,411 to 1,813,219 _01752 ECD_01753: ECD_01753 - UPF0229 family protein, at 1,813,332 to 1,814,615 _01753 ECD_01754: ECD_01754 - putative membrane-anchored diguanylate cyclase, at 1,814,762 to 1,816,237 _01754 Position (kb) 1813 1814 1815Strain fitness (log2 ratio) -1 0 1at 1812.446 kb on + strand, within ECD_01752at 1812.720 kb on - strand, within ECD_01752at 1812.800 kb on + strand, within ECD_01752at 1813.142 kb on - strandat 1813.298 kb on - strandat 1813.317 kb on + strandat 1813.321 kb on - strandat 1813.775 kb on + strand, within ECD_01753at 1814.452 kb on - strand, within ECD_01753

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Per-strain Table

Position Strand Gene LocusTag Fraction EV152
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1,812,446 + ECD_01752 0.57 -0.5
1,812,720 - ECD_01752 0.72 -0.7
1,812,800 + ECD_01752 0.77 +0.0
1,813,142 - +0.3
1,813,298 - -0.2
1,813,317 + -0.7
1,813,321 - +0.1
1,813,775 + ECD_01753 0.35 +0.2
1,814,452 - ECD_01753 0.87 +1.3

Or see this region's nucleotide sequence