Experiment: EV152
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_01751 and ECD_01752 are separated by 561 nucleotides ECD_01752 and ECD_01753 are separated by 112 nucleotides
ECD_01751: ECD_01751 - scaffolding protein for murein synthesizing machinery, at 1,810,103 to 1,810,849
_01751
ECD_01752: ECD_01752 - protein kinase, endogenous substrate unidentified; autokinase, at 1,811,411 to 1,813,219
_01752
ECD_01753: ECD_01753 - UPF0229 family protein, at 1,813,332 to 1,814,615
_01753
Position (kb)
1811
1812
1813
1814 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1810.507 kb on - strand, within ECD_01751 at 1810.535 kb on - strand, within ECD_01751 at 1810.535 kb on - strand, within ECD_01751 at 1810.645 kb on - strand, within ECD_01751 at 1810.690 kb on - strand, within ECD_01751 at 1810.735 kb on - strand, within ECD_01751 at 1810.755 kb on - strand, within ECD_01751 at 1810.944 kb on + strand at 1811.112 kb on - strand at 1811.131 kb on + strand at 1811.238 kb on + strand at 1811.707 kb on + strand, within ECD_01752 at 1812.135 kb on - strand, within ECD_01752 at 1812.179 kb on - strand, within ECD_01752 at 1812.179 kb on - strand, within ECD_01752 at 1812.446 kb on + strand, within ECD_01752 at 1812.720 kb on - strand, within ECD_01752 at 1812.800 kb on + strand, within ECD_01752 at 1813.142 kb on - strand at 1813.298 kb on - strand at 1813.317 kb on + strand at 1813.321 kb on - strand at 1813.775 kb on + strand, within ECD_01753
Per-strain Table
Position Strand Gene LocusTag Fraction EV152 remove 1,810,507 - ECD_01751 0.54 +0.9 1,810,535 - ECD_01751 0.58 -0.3 1,810,535 - ECD_01751 0.58 -0.8 1,810,645 - ECD_01751 0.73 +1.0 1,810,690 - ECD_01751 0.79 +0.0 1,810,735 - ECD_01751 0.85 -0.3 1,810,755 - ECD_01751 0.87 +1.8 1,810,944 + -1.0 1,811,112 - -1.9 1,811,131 + +0.3 1,811,238 + -0.6 1,811,707 + ECD_01752 0.16 -1.5 1,812,135 - ECD_01752 0.40 -0.1 1,812,179 - ECD_01752 0.42 -0.7 1,812,179 - ECD_01752 0.42 -0.8 1,812,446 + ECD_01752 0.57 -0.5 1,812,720 - ECD_01752 0.72 -0.7 1,812,800 + ECD_01752 0.77 +0.0 1,813,142 - +0.3 1,813,298 - -0.2 1,813,317 + -0.7 1,813,321 - +0.1 1,813,775 + ECD_01753 0.35 +0.2
Or see this region's nucleotide sequence