Experiment: EV152
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_01654 and ECD_01655 are separated by 99 nucleotides ECD_01655 and ECD_01656 overlap by 4 nucleotides ECD_01656 and ECD_01657 are separated by 388 nucleotides
ECD_01654: ECD_01654 - uncharacterized protein, at 1,709,349 to 1,709,537
_01654
ECD_01655: ECD_01655 - 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, at 1,709,637 to 1,710,047
_01655
ECD_01656: ECD_01656 - putative FAD-linked oxidoreductase, at 1,710,044 to 1,713,100
_01656
ECD_01657: ECD_01657 - UPF0118 family inner membrane protein, at 1,713,489 to 1,714,601
_01657
Position (kb)
1710
1711
1712
1713
1714 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1709.268 kb on + strand at 1709.537 kb on + strand at 1709.833 kb on - strand, within ECD_01655 at 1709.833 kb on - strand, within ECD_01655 at 1709.833 kb on - strand, within ECD_01655 at 1710.475 kb on - strand, within ECD_01656 at 1710.703 kb on - strand, within ECD_01656 at 1710.706 kb on - strand, within ECD_01656 at 1710.945 kb on + strand, within ECD_01656 at 1711.696 kb on + strand, within ECD_01656 at 1711.753 kb on - strand, within ECD_01656 at 1711.753 kb on - strand, within ECD_01656 at 1711.753 kb on - strand, within ECD_01656 at 1711.906 kb on - strand, within ECD_01656 at 1712.120 kb on - strand, within ECD_01656 at 1712.255 kb on - strand, within ECD_01656 at 1712.803 kb on + strand at 1712.959 kb on - strand at 1712.963 kb on - strand at 1712.963 kb on - strand at 1713.102 kb on - strand at 1713.102 kb on - strand at 1713.166 kb on - strand at 1713.247 kb on - strand at 1713.709 kb on + strand, within ECD_01657 at 1713.828 kb on - strand, within ECD_01657 at 1713.830 kb on + strand, within ECD_01657 at 1713.921 kb on + strand, within ECD_01657
Per-strain Table
Position Strand Gene LocusTag Fraction EV152 remove 1,709,268 + -0.5 1,709,537 + -0.2 1,709,833 - ECD_01655 0.48 -0.9 1,709,833 - ECD_01655 0.48 +0.2 1,709,833 - ECD_01655 0.48 -1.0 1,710,475 - ECD_01656 0.14 -0.2 1,710,703 - ECD_01656 0.22 -2.5 1,710,706 - ECD_01656 0.22 -1.8 1,710,945 + ECD_01656 0.29 -0.8 1,711,696 + ECD_01656 0.54 +1.9 1,711,753 - ECD_01656 0.56 +1.4 1,711,753 - ECD_01656 0.56 -0.6 1,711,753 - ECD_01656 0.56 -1.4 1,711,906 - ECD_01656 0.61 +0.6 1,712,120 - ECD_01656 0.68 -0.3 1,712,255 - ECD_01656 0.72 -0.6 1,712,803 + -1.1 1,712,959 - -0.1 1,712,963 - +1.9 1,712,963 - -0.9 1,713,102 - +0.4 1,713,102 - -0.2 1,713,166 - -0.2 1,713,247 - +0.6 1,713,709 + ECD_01657 0.20 -0.7 1,713,828 - ECD_01657 0.30 -0.1 1,713,830 + ECD_01657 0.31 +0.5 1,713,921 + ECD_01657 0.39 -0.6
Or see this region's nucleotide sequence