Strain Fitness in Escherichia coli BL21 around ECD_00364

Experiment: EV152

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00362 and ECD_00363 are separated by 88 nucleotidesECD_00363 and ECD_00364 are separated by 19 nucleotidesECD_00364 and ECD_00365 are separated by 77 nucleotides ECD_00362: ECD_00362 - fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase, at 398,856 to 399,959 _00362 ECD_00363: ECD_00363 - riboflavin synthase beta chain, at 400,048 to 400,518 _00363 ECD_00364: ECD_00364 - transcription antitermination protein, at 400,538 to 400,957 _00364 ECD_00365: ECD_00365 - thiamine monophosphate kinase, at 401,035 to 402,012 _00365 Position (kb) 400 401Strain fitness (log2 ratio) -1 0 1at 399.946 kb on + strandat 400.026 kb on + strandat 401.034 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction EV152
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399,946 + +0.3
400,026 + +0.8
401,034 + -0.5

Or see this region's nucleotide sequence