Strain Fitness in Escherichia coli BL21 around ECD_03909

Experiment: EV152

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03908 and ECD_03909 are separated by 242 nucleotidesECD_03909 and ECD_03910 are separated by 480 nucleotides ECD_03908: ECD_03908 - maltose outer membrane porin (maltoporin), at 4,155,343 to 4,156,683 _03908 ECD_03909: ECD_03909 - maltose regulon periplasmic protein, at 4,156,926 to 4,157,846 _03909 ECD_03910: ECD_03910 - hypothetical protein, at 4,158,327 to 4,159,655 _03910 Position (kb) 4156 4157 4158Strain fitness (log2 ratio) -2 -1 0 1at 4155.977 kb on + strand, within ECD_03908at 4155.977 kb on + strand, within ECD_03908at 4155.977 kb on + strand, within ECD_03908at 4155.978 kb on - strand, within ECD_03908at 4155.978 kb on - strand, within ECD_03908at 4156.022 kb on - strand, within ECD_03908at 4156.074 kb on + strand, within ECD_03908at 4156.117 kb on + strand, within ECD_03908at 4156.279 kb on + strand, within ECD_03908at 4156.279 kb on + strand, within ECD_03908at 4156.279 kb on + strand, within ECD_03908at 4156.280 kb on - strand, within ECD_03908at 4156.280 kb on - strand, within ECD_03908at 4156.280 kb on - strand, within ECD_03908at 4156.280 kb on - strand, within ECD_03908at 4156.280 kb on - strand, within ECD_03908at 4156.280 kb on - strand, within ECD_03908at 4156.287 kb on + strand, within ECD_03908at 4156.288 kb on - strand, within ECD_03908at 4156.288 kb on - strand, within ECD_03908at 4156.291 kb on + strand, within ECD_03908at 4156.291 kb on + strand, within ECD_03908at 4156.291 kb on + strand, within ECD_03908at 4156.292 kb on - strand, within ECD_03908at 4156.292 kb on - strand, within ECD_03908at 4156.292 kb on - strand, within ECD_03908at 4156.292 kb on - strand, within ECD_03908at 4156.357 kb on + strand, within ECD_03908at 4156.358 kb on - strand, within ECD_03908at 4156.522 kb on + strand, within ECD_03908at 4156.555 kb on + strandat 4156.556 kb on - strandat 4156.572 kb on + strandat 4156.573 kb on - strandat 4156.681 kb on + strandat 4156.684 kb on + strandat 4156.758 kb on + strandat 4156.767 kb on + strandat 4156.768 kb on - strandat 4156.768 kb on - strandat 4156.804 kb on - strandat 4156.994 kb on + strandat 4157.009 kb on + strandat 4157.010 kb on - strandat 4157.010 kb on - strandat 4157.010 kb on - strandat 4157.013 kb on + strandat 4157.013 kb on + strandat 4157.013 kb on + strandat 4157.014 kb on - strandat 4157.014 kb on - strandat 4157.014 kb on - strandat 4157.172 kb on + strand, within ECD_03909at 4157.466 kb on + strand, within ECD_03909at 4157.466 kb on + strand, within ECD_03909at 4157.466 kb on + strand, within ECD_03909at 4157.522 kb on + strand, within ECD_03909at 4157.522 kb on + strand, within ECD_03909at 4157.581 kb on + strand, within ECD_03909at 4157.590 kb on + strand, within ECD_03909at 4157.591 kb on - strand, within ECD_03909at 4157.715 kb on - strand, within ECD_03909at 4157.715 kb on - strand, within ECD_03909at 4157.717 kb on + strand, within ECD_03909at 4157.756 kb on + strandat 4157.844 kb on + strandat 4157.943 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction EV152
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4,155,977 + ECD_03908 0.47 -0.7
4,155,977 + ECD_03908 0.47 -0.6
4,155,977 + ECD_03908 0.47 +0.0
4,155,978 - ECD_03908 0.47 +0.4
4,155,978 - ECD_03908 0.47 +0.2
4,156,022 - ECD_03908 0.51 -1.4
4,156,074 + ECD_03908 0.55 +0.4
4,156,117 + ECD_03908 0.58 +0.4
4,156,279 + ECD_03908 0.70 -1.5
4,156,279 + ECD_03908 0.70 -0.6
4,156,279 + ECD_03908 0.70 -0.2
4,156,280 - ECD_03908 0.70 +1.2
4,156,280 - ECD_03908 0.70 +0.9
4,156,280 - ECD_03908 0.70 -0.8
4,156,280 - ECD_03908 0.70 +1.2
4,156,280 - ECD_03908 0.70 -0.7
4,156,280 - ECD_03908 0.70 +0.4
4,156,287 + ECD_03908 0.70 +1.2
4,156,288 - ECD_03908 0.70 +0.6
4,156,288 - ECD_03908 0.70 +0.6
4,156,291 + ECD_03908 0.71 +0.6
4,156,291 + ECD_03908 0.71 -1.4
4,156,291 + ECD_03908 0.71 +0.5
4,156,292 - ECD_03908 0.71 +0.0
4,156,292 - ECD_03908 0.71 -0.0
4,156,292 - ECD_03908 0.71 -0.2
4,156,292 - ECD_03908 0.71 +0.6
4,156,357 + ECD_03908 0.76 +0.7
4,156,358 - ECD_03908 0.76 +0.2
4,156,522 + ECD_03908 0.88 +1.4
4,156,555 + -0.1
4,156,556 - +0.0
4,156,572 + +0.7
4,156,573 - -0.1
4,156,681 + +0.0
4,156,684 + +0.5
4,156,758 + +0.8
4,156,767 + -0.5
4,156,768 - +1.2
4,156,768 - -0.2
4,156,804 - +1.2
4,156,994 + +1.4
4,157,009 + -0.3
4,157,010 - -1.0
4,157,010 - +0.8
4,157,010 - -0.4
4,157,013 + -0.9
4,157,013 + -1.1
4,157,013 + -0.2
4,157,014 - +0.7
4,157,014 - +0.3
4,157,014 - +0.7
4,157,172 + ECD_03909 0.27 -0.7
4,157,466 + ECD_03909 0.59 +0.2
4,157,466 + ECD_03909 0.59 +1.2
4,157,466 + ECD_03909 0.59 -2.1
4,157,522 + ECD_03909 0.65 -0.2
4,157,522 + ECD_03909 0.65 +0.1
4,157,581 + ECD_03909 0.71 +0.6
4,157,590 + ECD_03909 0.72 +0.5
4,157,591 - ECD_03909 0.72 +1.2
4,157,715 - ECD_03909 0.86 +0.2
4,157,715 - ECD_03909 0.86 +0.6
4,157,717 + ECD_03909 0.86 -0.2
4,157,756 + -0.1
4,157,844 + +0.9
4,157,943 - -0.2

Or see this region's nucleotide sequence