Strain Fitness in Escherichia coli BL21 around ECD_03058

Experiment: EV152

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03056 and ECD_03057 overlap by 1 nucleotidesECD_03057 and ECD_03058 are separated by 18 nucleotidesECD_03058 and ECD_03059 are separated by 4 nucleotidesECD_03059 and ECD_03060 are separated by 7 nucleotides ECD_03056: ECD_03056 - ABC transporter maintaining OM lipid asymmetry, cytoplasmic STAS component, at 3,205,463 to 3,205,756 _03056 ECD_03057: ECD_03057 - ABC transporter maintaining OM lipid asymmetry, periplasmic binding protein, at 3,205,756 to 3,206,391 _03057 ECD_03058: ECD_03058 - OM lipid asymmetry maintenance protein; membrane-anchored ABC family periplasmic binding protein, at 3,206,410 to 3,206,961 _03058 ECD_03059: ECD_03059 - ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein, at 3,206,966 to 3,207,748 _03059 ECD_03060: ECD_03060 - ABC transporter maintaining OM lipid asymmetry, ATP-binding protein, at 3,207,756 to 3,208,565 _03060 Position (kb) 3206 3207Strain fitness (log2 ratio) -2 -1 0 1 2at 3205.512 kb on + strand, within ECD_03056at 3205.512 kb on + strand, within ECD_03056at 3205.512 kb on + strand, within ECD_03056at 3205.513 kb on - strand, within ECD_03056at 3205.513 kb on - strand, within ECD_03056at 3205.574 kb on - strand, within ECD_03056at 3205.640 kb on - strand, within ECD_03056at 3205.833 kb on + strand, within ECD_03057at 3205.901 kb on + strand, within ECD_03057at 3205.901 kb on + strand, within ECD_03057at 3205.902 kb on - strand, within ECD_03057at 3206.043 kb on - strand, within ECD_03057at 3206.043 kb on - strand, within ECD_03057at 3206.043 kb on - strand, within ECD_03057at 3206.057 kb on + strand, within ECD_03057at 3206.057 kb on + strand, within ECD_03057at 3206.058 kb on - strand, within ECD_03057at 3206.058 kb on - strand, within ECD_03057at 3206.058 kb on - strand, within ECD_03057at 3206.058 kb on - strand, within ECD_03057at 3206.058 kb on - strand, within ECD_03057at 3206.078 kb on + strand, within ECD_03057at 3206.078 kb on + strand, within ECD_03057at 3206.079 kb on - strand, within ECD_03057at 3206.115 kb on - strand, within ECD_03057at 3206.115 kb on - strand, within ECD_03057at 3206.115 kb on - strand, within ECD_03057at 3206.147 kb on + strand, within ECD_03057at 3206.148 kb on - strand, within ECD_03057at 3206.148 kb on - strand, within ECD_03057at 3206.189 kb on - strand, within ECD_03057at 3206.189 kb on - strand, within ECD_03057at 3206.189 kb on - strand, within ECD_03057at 3206.192 kb on + strand, within ECD_03057at 3206.192 kb on + strand, within ECD_03057at 3206.193 kb on - strand, within ECD_03057at 3206.193 kb on - strand, within ECD_03057at 3206.221 kb on - strand, within ECD_03057at 3206.228 kb on + strand, within ECD_03057at 3206.229 kb on - strand, within ECD_03057at 3206.307 kb on + strand, within ECD_03057at 3206.307 kb on + strand, within ECD_03057at 3206.308 kb on - strand, within ECD_03057at 3206.310 kb on - strand, within ECD_03057at 3206.310 kb on - strand, within ECD_03057at 3206.378 kb on - strandat 3206.446 kb on - strandat 3206.484 kb on + strand, within ECD_03058at 3206.485 kb on - strand, within ECD_03058at 3206.499 kb on + strand, within ECD_03058at 3206.503 kb on - strand, within ECD_03058at 3206.507 kb on + strand, within ECD_03058at 3206.550 kb on + strand, within ECD_03058at 3206.551 kb on - strand, within ECD_03058at 3206.551 kb on - strand, within ECD_03058at 3206.551 kb on - strand, within ECD_03058at 3206.551 kb on - strand, within ECD_03058at 3206.566 kb on - strand, within ECD_03058at 3206.566 kb on - strand, within ECD_03058at 3206.620 kb on + strand, within ECD_03058at 3206.621 kb on - strand, within ECD_03058at 3206.630 kb on + strand, within ECD_03058at 3206.631 kb on - strand, within ECD_03058at 3206.631 kb on - strand, within ECD_03058at 3206.655 kb on + strand, within ECD_03058at 3206.656 kb on - strand, within ECD_03058at 3206.691 kb on + strand, within ECD_03058at 3206.693 kb on + strand, within ECD_03058at 3206.694 kb on - strand, within ECD_03058at 3206.694 kb on - strand, within ECD_03058at 3206.694 kb on - strand, within ECD_03058at 3206.694 kb on - strand, within ECD_03058at 3206.749 kb on - strand, within ECD_03058at 3206.749 kb on - strand, within ECD_03058at 3206.785 kb on - strand, within ECD_03058at 3206.785 kb on - strand, within ECD_03058at 3206.856 kb on + strand, within ECD_03058at 3206.857 kb on - strand, within ECD_03058at 3206.861 kb on - strand, within ECD_03058at 3206.861 kb on - strand, within ECD_03058at 3206.861 kb on - strand, within ECD_03058at 3206.861 kb on - strand, within ECD_03058at 3206.861 kb on - strand, within ECD_03058at 3206.861 kb on - strand, within ECD_03058at 3206.918 kb on - strandat 3207.137 kb on - strand, within ECD_03059at 3207.161 kb on - strand, within ECD_03059at 3207.285 kb on - strand, within ECD_03059at 3207.293 kb on - strand, within ECD_03059at 3207.505 kb on + strand, within ECD_03059at 3207.505 kb on + strand, within ECD_03059at 3207.505 kb on + strand, within ECD_03059at 3207.507 kb on + strand, within ECD_03059at 3207.507 kb on + strand, within ECD_03059at 3207.507 kb on + strand, within ECD_03059at 3207.507 kb on + strand, within ECD_03059at 3207.507 kb on + strand, within ECD_03059at 3207.507 kb on + strand, within ECD_03059at 3207.508 kb on - strand, within ECD_03059at 3207.508 kb on - strand, within ECD_03059at 3207.508 kb on - strand, within ECD_03059at 3207.575 kb on - strand, within ECD_03059at 3207.575 kb on - strand, within ECD_03059at 3207.601 kb on + strand, within ECD_03059at 3207.601 kb on + strand, within ECD_03059at 3207.603 kb on + strand, within ECD_03059at 3207.604 kb on - strand, within ECD_03059at 3207.604 kb on - strand, within ECD_03059at 3207.668 kb on + strand, within ECD_03059at 3207.669 kb on - strand, within ECD_03059at 3207.707 kb on - strandat 3207.715 kb on + strandat 3207.741 kb on - strandat 3207.768 kb on + strandat 3207.847 kb on - strand, within ECD_03060at 3207.847 kb on - strand, within ECD_03060at 3207.935 kb on + strand, within ECD_03060at 3207.936 kb on - strand, within ECD_03060at 3207.936 kb on - strand, within ECD_03060at 3207.936 kb on - strand, within ECD_03060

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Per-strain Table

Position Strand Gene LocusTag Fraction EV152
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3,205,512 + ECD_03056 0.17 -0.4
3,205,512 + ECD_03056 0.17 -0.1
3,205,512 + ECD_03056 0.17 +1.1
3,205,513 - ECD_03056 0.17 +0.4
3,205,513 - ECD_03056 0.17 +0.4
3,205,574 - ECD_03056 0.38 +0.2
3,205,640 - ECD_03056 0.60 -0.3
3,205,833 + ECD_03057 0.12 -1.2
3,205,901 + ECD_03057 0.23 +0.2
3,205,901 + ECD_03057 0.23 -0.4
3,205,902 - ECD_03057 0.23 +0.2
3,206,043 - ECD_03057 0.45 +0.0
3,206,043 - ECD_03057 0.45 +1.3
3,206,043 - ECD_03057 0.45 -0.1
3,206,057 + ECD_03057 0.47 +0.7
3,206,057 + ECD_03057 0.47 +1.1
3,206,058 - ECD_03057 0.47 +0.4
3,206,058 - ECD_03057 0.47 -0.2
3,206,058 - ECD_03057 0.47 +1.2
3,206,058 - ECD_03057 0.47 +0.8
3,206,058 - ECD_03057 0.47 -0.8
3,206,078 + ECD_03057 0.51 -0.7
3,206,078 + ECD_03057 0.51 +2.2
3,206,079 - ECD_03057 0.51 +0.7
3,206,115 - ECD_03057 0.56 -0.4
3,206,115 - ECD_03057 0.56 +0.1
3,206,115 - ECD_03057 0.56 -0.4
3,206,147 + ECD_03057 0.61 +0.9
3,206,148 - ECD_03057 0.62 +1.2
3,206,148 - ECD_03057 0.62 +0.1
3,206,189 - ECD_03057 0.68 -0.3
3,206,189 - ECD_03057 0.68 +0.6
3,206,189 - ECD_03057 0.68 +0.2
3,206,192 + ECD_03057 0.69 +1.0
3,206,192 + ECD_03057 0.69 -0.2
3,206,193 - ECD_03057 0.69 -0.1
3,206,193 - ECD_03057 0.69 +0.4
3,206,221 - ECD_03057 0.73 +0.6
3,206,228 + ECD_03057 0.74 +0.5
3,206,229 - ECD_03057 0.74 +0.5
3,206,307 + ECD_03057 0.87 +1.2
3,206,307 + ECD_03057 0.87 +0.8
3,206,308 - ECD_03057 0.87 +1.9
3,206,310 - ECD_03057 0.87 -1.0
3,206,310 - ECD_03057 0.87 -1.0
3,206,378 - +0.8
3,206,446 - -1.8
3,206,484 + ECD_03058 0.13 -0.1
3,206,485 - ECD_03058 0.14 -0.0
3,206,499 + ECD_03058 0.16 +1.2
3,206,503 - ECD_03058 0.17 -0.2
3,206,507 + ECD_03058 0.18 -1.0
3,206,550 + ECD_03058 0.25 +0.7
3,206,551 - ECD_03058 0.26 +1.1
3,206,551 - ECD_03058 0.26 +0.5
3,206,551 - ECD_03058 0.26 +0.4
3,206,551 - ECD_03058 0.26 +0.5
3,206,566 - ECD_03058 0.28 +2.5
3,206,566 - ECD_03058 0.28 +0.7
3,206,620 + ECD_03058 0.38 +0.5
3,206,621 - ECD_03058 0.38 +0.3
3,206,630 + ECD_03058 0.40 +0.7
3,206,631 - ECD_03058 0.40 +1.2
3,206,631 - ECD_03058 0.40 +1.0
3,206,655 + ECD_03058 0.44 -1.2
3,206,656 - ECD_03058 0.45 +0.2
3,206,691 + ECD_03058 0.51 +1.3
3,206,693 + ECD_03058 0.51 +0.4
3,206,694 - ECD_03058 0.51 +1.6
3,206,694 - ECD_03058 0.51 +0.8
3,206,694 - ECD_03058 0.51 +1.2
3,206,694 - ECD_03058 0.51 +0.5
3,206,749 - ECD_03058 0.61 -0.7
3,206,749 - ECD_03058 0.61 +0.1
3,206,785 - ECD_03058 0.68 +0.7
3,206,785 - ECD_03058 0.68 +1.4
3,206,856 + ECD_03058 0.81 +0.2
3,206,857 - ECD_03058 0.81 +1.4
3,206,861 - ECD_03058 0.82 +0.2
3,206,861 - ECD_03058 0.82 +1.2
3,206,861 - ECD_03058 0.82 +0.7
3,206,861 - ECD_03058 0.82 +1.2
3,206,861 - ECD_03058 0.82 +0.9
3,206,861 - ECD_03058 0.82 +0.3
3,206,918 - +0.4
3,207,137 - ECD_03059 0.22 +0.9
3,207,161 - ECD_03059 0.25 +1.4
3,207,285 - ECD_03059 0.41 +0.8
3,207,293 - ECD_03059 0.42 +1.5
3,207,505 + ECD_03059 0.69 +0.6
3,207,505 + ECD_03059 0.69 -0.7
3,207,505 + ECD_03059 0.69 +0.2
3,207,507 + ECD_03059 0.69 -0.2
3,207,507 + ECD_03059 0.69 -1.5
3,207,507 + ECD_03059 0.69 +1.0
3,207,507 + ECD_03059 0.69 -1.2
3,207,507 + ECD_03059 0.69 -1.0
3,207,507 + ECD_03059 0.69 +0.2
3,207,508 - ECD_03059 0.69 +2.2
3,207,508 - ECD_03059 0.69 -1.2
3,207,508 - ECD_03059 0.69 +0.6
3,207,575 - ECD_03059 0.78 +0.2
3,207,575 - ECD_03059 0.78 +0.6
3,207,601 + ECD_03059 0.81 +0.6
3,207,601 + ECD_03059 0.81 +0.9
3,207,603 + ECD_03059 0.81 +0.1
3,207,604 - ECD_03059 0.81 +1.3
3,207,604 - ECD_03059 0.81 +0.6
3,207,668 + ECD_03059 0.90 +0.7
3,207,669 - ECD_03059 0.90 +0.1
3,207,707 - +0.8
3,207,715 + +0.3
3,207,741 - -0.2
3,207,768 + +1.6
3,207,847 - ECD_03060 0.11 -0.3
3,207,847 - ECD_03060 0.11 -0.6
3,207,935 + ECD_03060 0.22 -1.2
3,207,936 - ECD_03060 0.22 -0.8
3,207,936 - ECD_03060 0.22 +0.8
3,207,936 - ECD_03060 0.22 +0.1

Or see this region's nucleotide sequence