Experiment: EV152
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03056 and ECD_03057 overlap by 1 nucleotides ECD_03057 and ECD_03058 are separated by 18 nucleotides ECD_03058 and ECD_03059 are separated by 4 nucleotides ECD_03059 and ECD_03060 are separated by 7 nucleotides
ECD_03056: ECD_03056 - ABC transporter maintaining OM lipid asymmetry, cytoplasmic STAS component, at 3,205,463 to 3,205,756
_03056
ECD_03057: ECD_03057 - ABC transporter maintaining OM lipid asymmetry, periplasmic binding protein, at 3,205,756 to 3,206,391
_03057
ECD_03058: ECD_03058 - OM lipid asymmetry maintenance protein; membrane-anchored ABC family periplasmic binding protein, at 3,206,410 to 3,206,961
_03058
ECD_03059: ECD_03059 - ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein, at 3,206,966 to 3,207,748
_03059
ECD_03060: ECD_03060 - ABC transporter maintaining OM lipid asymmetry, ATP-binding protein, at 3,207,756 to 3,208,565
_03060
Position (kb)
3206
3207 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3205.512 kb on + strand, within ECD_03056 at 3205.512 kb on + strand, within ECD_03056 at 3205.512 kb on + strand, within ECD_03056 at 3205.513 kb on - strand, within ECD_03056 at 3205.513 kb on - strand, within ECD_03056 at 3205.574 kb on - strand, within ECD_03056 at 3205.640 kb on - strand, within ECD_03056 at 3205.833 kb on + strand, within ECD_03057 at 3205.901 kb on + strand, within ECD_03057 at 3205.901 kb on + strand, within ECD_03057 at 3205.902 kb on - strand, within ECD_03057 at 3206.043 kb on - strand, within ECD_03057 at 3206.043 kb on - strand, within ECD_03057 at 3206.043 kb on - strand, within ECD_03057 at 3206.057 kb on + strand, within ECD_03057 at 3206.057 kb on + strand, within ECD_03057 at 3206.058 kb on - strand, within ECD_03057 at 3206.058 kb on - strand, within ECD_03057 at 3206.058 kb on - strand, within ECD_03057 at 3206.058 kb on - strand, within ECD_03057 at 3206.058 kb on - strand, within ECD_03057 at 3206.078 kb on + strand, within ECD_03057 at 3206.078 kb on + strand, within ECD_03057 at 3206.079 kb on - strand, within ECD_03057 at 3206.115 kb on - strand, within ECD_03057 at 3206.115 kb on - strand, within ECD_03057 at 3206.115 kb on - strand, within ECD_03057 at 3206.147 kb on + strand, within ECD_03057 at 3206.148 kb on - strand, within ECD_03057 at 3206.148 kb on - strand, within ECD_03057 at 3206.189 kb on - strand, within ECD_03057 at 3206.189 kb on - strand, within ECD_03057 at 3206.189 kb on - strand, within ECD_03057 at 3206.192 kb on + strand, within ECD_03057 at 3206.192 kb on + strand, within ECD_03057 at 3206.193 kb on - strand, within ECD_03057 at 3206.193 kb on - strand, within ECD_03057 at 3206.221 kb on - strand, within ECD_03057 at 3206.228 kb on + strand, within ECD_03057 at 3206.229 kb on - strand, within ECD_03057 at 3206.307 kb on + strand, within ECD_03057 at 3206.307 kb on + strand, within ECD_03057 at 3206.308 kb on - strand, within ECD_03057 at 3206.310 kb on - strand, within ECD_03057 at 3206.310 kb on - strand, within ECD_03057 at 3206.378 kb on - strand at 3206.446 kb on - strand at 3206.484 kb on + strand, within ECD_03058 at 3206.485 kb on - strand, within ECD_03058 at 3206.499 kb on + strand, within ECD_03058 at 3206.503 kb on - strand, within ECD_03058 at 3206.507 kb on + strand, within ECD_03058 at 3206.550 kb on + strand, within ECD_03058 at 3206.551 kb on - strand, within ECD_03058 at 3206.551 kb on - strand, within ECD_03058 at 3206.551 kb on - strand, within ECD_03058 at 3206.551 kb on - strand, within ECD_03058 at 3206.566 kb on - strand, within ECD_03058 at 3206.566 kb on - strand, within ECD_03058 at 3206.620 kb on + strand, within ECD_03058 at 3206.621 kb on - strand, within ECD_03058 at 3206.630 kb on + strand, within ECD_03058 at 3206.631 kb on - strand, within ECD_03058 at 3206.631 kb on - strand, within ECD_03058 at 3206.655 kb on + strand, within ECD_03058 at 3206.656 kb on - strand, within ECD_03058 at 3206.691 kb on + strand, within ECD_03058 at 3206.693 kb on + strand, within ECD_03058 at 3206.694 kb on - strand, within ECD_03058 at 3206.694 kb on - strand, within ECD_03058 at 3206.694 kb on - strand, within ECD_03058 at 3206.694 kb on - strand, within ECD_03058 at 3206.749 kb on - strand, within ECD_03058 at 3206.749 kb on - strand, within ECD_03058 at 3206.785 kb on - strand, within ECD_03058 at 3206.785 kb on - strand, within ECD_03058 at 3206.856 kb on + strand, within ECD_03058 at 3206.857 kb on - strand, within ECD_03058 at 3206.861 kb on - strand, within ECD_03058 at 3206.861 kb on - strand, within ECD_03058 at 3206.861 kb on - strand, within ECD_03058 at 3206.861 kb on - strand, within ECD_03058 at 3206.861 kb on - strand, within ECD_03058 at 3206.861 kb on - strand, within ECD_03058 at 3206.918 kb on - strand at 3207.137 kb on - strand, within ECD_03059 at 3207.161 kb on - strand, within ECD_03059 at 3207.285 kb on - strand, within ECD_03059 at 3207.293 kb on - strand, within ECD_03059 at 3207.505 kb on + strand, within ECD_03059 at 3207.505 kb on + strand, within ECD_03059 at 3207.505 kb on + strand, within ECD_03059 at 3207.507 kb on + strand, within ECD_03059 at 3207.507 kb on + strand, within ECD_03059 at 3207.507 kb on + strand, within ECD_03059 at 3207.507 kb on + strand, within ECD_03059 at 3207.507 kb on + strand, within ECD_03059 at 3207.507 kb on + strand, within ECD_03059 at 3207.508 kb on - strand, within ECD_03059 at 3207.508 kb on - strand, within ECD_03059 at 3207.508 kb on - strand, within ECD_03059 at 3207.575 kb on - strand, within ECD_03059 at 3207.575 kb on - strand, within ECD_03059 at 3207.601 kb on + strand, within ECD_03059 at 3207.601 kb on + strand, within ECD_03059 at 3207.603 kb on + strand, within ECD_03059 at 3207.604 kb on - strand, within ECD_03059 at 3207.604 kb on - strand, within ECD_03059 at 3207.668 kb on + strand, within ECD_03059 at 3207.669 kb on - strand, within ECD_03059 at 3207.707 kb on - strand at 3207.715 kb on + strand at 3207.741 kb on - strand at 3207.768 kb on + strand at 3207.847 kb on - strand, within ECD_03060 at 3207.847 kb on - strand, within ECD_03060 at 3207.935 kb on + strand, within ECD_03060 at 3207.936 kb on - strand, within ECD_03060 at 3207.936 kb on - strand, within ECD_03060 at 3207.936 kb on - strand, within ECD_03060
Per-strain Table
Position Strand Gene LocusTag Fraction EV152 remove 3,205,512 + ECD_03056 0.17 -0.4 3,205,512 + ECD_03056 0.17 -0.1 3,205,512 + ECD_03056 0.17 +1.1 3,205,513 - ECD_03056 0.17 +0.4 3,205,513 - ECD_03056 0.17 +0.4 3,205,574 - ECD_03056 0.38 +0.2 3,205,640 - ECD_03056 0.60 -0.3 3,205,833 + ECD_03057 0.12 -1.2 3,205,901 + ECD_03057 0.23 +0.2 3,205,901 + ECD_03057 0.23 -0.4 3,205,902 - ECD_03057 0.23 +0.2 3,206,043 - ECD_03057 0.45 +0.0 3,206,043 - ECD_03057 0.45 +1.3 3,206,043 - ECD_03057 0.45 -0.1 3,206,057 + ECD_03057 0.47 +0.7 3,206,057 + ECD_03057 0.47 +1.1 3,206,058 - ECD_03057 0.47 +0.4 3,206,058 - ECD_03057 0.47 -0.2 3,206,058 - ECD_03057 0.47 +1.2 3,206,058 - ECD_03057 0.47 +0.8 3,206,058 - ECD_03057 0.47 -0.8 3,206,078 + ECD_03057 0.51 -0.7 3,206,078 + ECD_03057 0.51 +2.2 3,206,079 - ECD_03057 0.51 +0.7 3,206,115 - ECD_03057 0.56 -0.4 3,206,115 - ECD_03057 0.56 +0.1 3,206,115 - ECD_03057 0.56 -0.4 3,206,147 + ECD_03057 0.61 +0.9 3,206,148 - ECD_03057 0.62 +1.2 3,206,148 - ECD_03057 0.62 +0.1 3,206,189 - ECD_03057 0.68 -0.3 3,206,189 - ECD_03057 0.68 +0.6 3,206,189 - ECD_03057 0.68 +0.2 3,206,192 + ECD_03057 0.69 +1.0 3,206,192 + ECD_03057 0.69 -0.2 3,206,193 - ECD_03057 0.69 -0.1 3,206,193 - ECD_03057 0.69 +0.4 3,206,221 - ECD_03057 0.73 +0.6 3,206,228 + ECD_03057 0.74 +0.5 3,206,229 - ECD_03057 0.74 +0.5 3,206,307 + ECD_03057 0.87 +1.2 3,206,307 + ECD_03057 0.87 +0.8 3,206,308 - ECD_03057 0.87 +1.9 3,206,310 - ECD_03057 0.87 -1.0 3,206,310 - ECD_03057 0.87 -1.0 3,206,378 - +0.8 3,206,446 - -1.8 3,206,484 + ECD_03058 0.13 -0.1 3,206,485 - ECD_03058 0.14 -0.0 3,206,499 + ECD_03058 0.16 +1.2 3,206,503 - ECD_03058 0.17 -0.2 3,206,507 + ECD_03058 0.18 -1.0 3,206,550 + ECD_03058 0.25 +0.7 3,206,551 - ECD_03058 0.26 +1.1 3,206,551 - ECD_03058 0.26 +0.5 3,206,551 - ECD_03058 0.26 +0.4 3,206,551 - ECD_03058 0.26 +0.5 3,206,566 - ECD_03058 0.28 +2.5 3,206,566 - ECD_03058 0.28 +0.7 3,206,620 + ECD_03058 0.38 +0.5 3,206,621 - ECD_03058 0.38 +0.3 3,206,630 + ECD_03058 0.40 +0.7 3,206,631 - ECD_03058 0.40 +1.2 3,206,631 - ECD_03058 0.40 +1.0 3,206,655 + ECD_03058 0.44 -1.2 3,206,656 - ECD_03058 0.45 +0.2 3,206,691 + ECD_03058 0.51 +1.3 3,206,693 + ECD_03058 0.51 +0.4 3,206,694 - ECD_03058 0.51 +1.6 3,206,694 - ECD_03058 0.51 +0.8 3,206,694 - ECD_03058 0.51 +1.2 3,206,694 - ECD_03058 0.51 +0.5 3,206,749 - ECD_03058 0.61 -0.7 3,206,749 - ECD_03058 0.61 +0.1 3,206,785 - ECD_03058 0.68 +0.7 3,206,785 - ECD_03058 0.68 +1.4 3,206,856 + ECD_03058 0.81 +0.2 3,206,857 - ECD_03058 0.81 +1.4 3,206,861 - ECD_03058 0.82 +0.2 3,206,861 - ECD_03058 0.82 +1.2 3,206,861 - ECD_03058 0.82 +0.7 3,206,861 - ECD_03058 0.82 +1.2 3,206,861 - ECD_03058 0.82 +0.9 3,206,861 - ECD_03058 0.82 +0.3 3,206,918 - +0.4 3,207,137 - ECD_03059 0.22 +0.9 3,207,161 - ECD_03059 0.25 +1.4 3,207,285 - ECD_03059 0.41 +0.8 3,207,293 - ECD_03059 0.42 +1.5 3,207,505 + ECD_03059 0.69 +0.6 3,207,505 + ECD_03059 0.69 -0.7 3,207,505 + ECD_03059 0.69 +0.2 3,207,507 + ECD_03059 0.69 -0.2 3,207,507 + ECD_03059 0.69 -1.5 3,207,507 + ECD_03059 0.69 +1.0 3,207,507 + ECD_03059 0.69 -1.2 3,207,507 + ECD_03059 0.69 -1.0 3,207,507 + ECD_03059 0.69 +0.2 3,207,508 - ECD_03059 0.69 +2.2 3,207,508 - ECD_03059 0.69 -1.2 3,207,508 - ECD_03059 0.69 +0.6 3,207,575 - ECD_03059 0.78 +0.2 3,207,575 - ECD_03059 0.78 +0.6 3,207,601 + ECD_03059 0.81 +0.6 3,207,601 + ECD_03059 0.81 +0.9 3,207,603 + ECD_03059 0.81 +0.1 3,207,604 - ECD_03059 0.81 +1.3 3,207,604 - ECD_03059 0.81 +0.6 3,207,668 + ECD_03059 0.90 +0.7 3,207,669 - ECD_03059 0.90 +0.1 3,207,707 - +0.8 3,207,715 + +0.3 3,207,741 - -0.2 3,207,768 + +1.6 3,207,847 - ECD_03060 0.11 -0.3 3,207,847 - ECD_03060 0.11 -0.6 3,207,935 + ECD_03060 0.22 -1.2 3,207,936 - ECD_03060 0.22 -0.8 3,207,936 - ECD_03060 0.22 +0.8 3,207,936 - ECD_03060 0.22 +0.1
Or see this region's nucleotide sequence