Strain Fitness in Escherichia coli BL21 around ECD_02574

Experiment: EV152

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02573 and ECD_02574 overlap by 4 nucleotidesECD_02574 and ECD_02575 are separated by 124 nucleotidesECD_02575 and ECD_02576 are separated by 211 nucleotides ECD_02573: ECD_02573 - hydrogenase 3, membrane subunit, at 2,687,382 to 2,689,208 _02573 ECD_02574: ECD_02574 - hydrogenase 3, Fe-S subunit, at 2,689,205 to 2,689,816 _02574 ECD_02575: ECD_02575 - regulator of the transcriptional regulator FhlA, at 2,689,941 to 2,690,402 _02575 ECD_02576: ECD_02576 - protein involved in nickel insertion into hydrogenases 3, at 2,690,614 to 2,690,964 _02576 Position (kb) 2689 2690Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2688.213 kb on - strand, within ECD_02573at 2688.213 kb on - strand, within ECD_02573at 2688.219 kb on - strand, within ECD_02573at 2688.229 kb on + strand, within ECD_02573at 2688.288 kb on + strand, within ECD_02573at 2688.315 kb on - strand, within ECD_02573at 2688.340 kb on + strand, within ECD_02573at 2688.341 kb on - strand, within ECD_02573at 2688.341 kb on - strand, within ECD_02573at 2688.379 kb on + strand, within ECD_02573at 2688.379 kb on + strand, within ECD_02573at 2688.379 kb on + strand, within ECD_02573at 2688.380 kb on - strand, within ECD_02573at 2688.380 kb on - strand, within ECD_02573at 2688.450 kb on - strand, within ECD_02573at 2688.471 kb on + strand, within ECD_02573at 2688.471 kb on + strand, within ECD_02573at 2688.472 kb on - strand, within ECD_02573at 2688.472 kb on - strand, within ECD_02573at 2688.472 kb on - strand, within ECD_02573at 2688.576 kb on - strand, within ECD_02573at 2688.648 kb on - strand, within ECD_02573at 2688.654 kb on - strand, within ECD_02573at 2688.813 kb on + strand, within ECD_02573at 2688.813 kb on + strand, within ECD_02573at 2688.814 kb on - strand, within ECD_02573at 2688.872 kb on + strand, within ECD_02573at 2688.873 kb on - strand, within ECD_02573at 2688.873 kb on - strand, within ECD_02573at 2688.873 kb on - strand, within ECD_02573at 2688.873 kb on - strand, within ECD_02573at 2688.929 kb on - strand, within ECD_02573at 2688.929 kb on - strand, within ECD_02573at 2688.963 kb on - strand, within ECD_02573at 2689.003 kb on + strand, within ECD_02573at 2689.003 kb on + strand, within ECD_02573at 2689.003 kb on + strand, within ECD_02573at 2689.003 kb on + strand, within ECD_02573at 2689.004 kb on - strand, within ECD_02573at 2689.004 kb on - strand, within ECD_02573at 2689.004 kb on - strand, within ECD_02573at 2689.004 kb on - strand, within ECD_02573at 2689.004 kb on - strand, within ECD_02573at 2689.004 kb on - strand, within ECD_02573at 2689.004 kb on - strand, within ECD_02573at 2689.004 kb on - strand, within ECD_02573at 2689.004 kb on - strand, within ECD_02573at 2689.004 kb on - strand, within ECD_02573at 2689.004 kb on - strand, within ECD_02573at 2689.050 kb on + strandat 2689.050 kb on + strandat 2689.051 kb on - strandat 2689.051 kb on - strandat 2689.051 kb on - strandat 2689.051 kb on - strandat 2689.051 kb on - strandat 2689.075 kb on + strandat 2689.075 kb on + strandat 2689.075 kb on + strandat 2689.076 kb on - strandat 2689.076 kb on - strandat 2689.076 kb on - strandat 2689.076 kb on - strandat 2689.076 kb on - strandat 2689.076 kb on - strandat 2689.076 kb on - strandat 2689.083 kb on - strandat 2689.083 kb on - strandat 2689.119 kb on + strandat 2689.211 kb on - strandat 2689.211 kb on - strandat 2689.283 kb on - strand, within ECD_02574at 2689.283 kb on - strand, within ECD_02574at 2689.283 kb on - strand, within ECD_02574at 2689.334 kb on - strand, within ECD_02574at 2689.378 kb on + strand, within ECD_02574at 2689.378 kb on + strand, within ECD_02574at 2689.378 kb on + strand, within ECD_02574at 2689.378 kb on + strand, within ECD_02574at 2689.378 kb on + strand, within ECD_02574at 2689.378 kb on + strand, within ECD_02574at 2689.378 kb on + strand, within ECD_02574at 2689.378 kb on + strand, within ECD_02574at 2689.379 kb on - strand, within ECD_02574at 2689.379 kb on - strand, within ECD_02574at 2689.379 kb on - strand, within ECD_02574at 2689.379 kb on - strand, within ECD_02574at 2689.379 kb on - strand, within ECD_02574at 2689.379 kb on - strand, within ECD_02574at 2689.412 kb on - strand, within ECD_02574at 2689.568 kb on + strand, within ECD_02574at 2689.569 kb on - strand, within ECD_02574at 2689.803 kb on - strandat 2689.803 kb on - strandat 2689.912 kb on - strandat 2689.912 kb on - strandat 2690.003 kb on + strand, within ECD_02575at 2690.011 kb on + strand, within ECD_02575at 2690.011 kb on + strand, within ECD_02575at 2690.011 kb on + strand, within ECD_02575at 2690.011 kb on + strand, within ECD_02575at 2690.011 kb on + strand, within ECD_02575at 2690.011 kb on + strand, within ECD_02575at 2690.011 kb on + strand, within ECD_02575at 2690.012 kb on - strand, within ECD_02575at 2690.012 kb on - strand, within ECD_02575at 2690.012 kb on - strand, within ECD_02575at 2690.012 kb on - strand, within ECD_02575at 2690.012 kb on - strand, within ECD_02575at 2690.012 kb on - strand, within ECD_02575at 2690.012 kb on - strand, within ECD_02575at 2690.012 kb on - strand, within ECD_02575at 2690.012 kb on - strand, within ECD_02575at 2690.012 kb on - strand, within ECD_02575at 2690.013 kb on + strand, within ECD_02575at 2690.013 kb on + strand, within ECD_02575at 2690.013 kb on + strand, within ECD_02575at 2690.013 kb on + strand, within ECD_02575at 2690.013 kb on + strand, within ECD_02575at 2690.013 kb on + strand, within ECD_02575at 2690.014 kb on - strand, within ECD_02575at 2690.014 kb on - strand, within ECD_02575at 2690.014 kb on - strand, within ECD_02575at 2690.014 kb on - strand, within ECD_02575at 2690.014 kb on - strand, within ECD_02575at 2690.014 kb on - strand, within ECD_02575at 2690.014 kb on - strand, within ECD_02575at 2690.014 kb on - strand, within ECD_02575at 2690.014 kb on - strand, within ECD_02575at 2690.014 kb on - strand, within ECD_02575at 2690.023 kb on + strand, within ECD_02575at 2690.047 kb on + strand, within ECD_02575at 2690.047 kb on + strand, within ECD_02575at 2690.047 kb on + strand, within ECD_02575at 2690.047 kb on + strand, within ECD_02575at 2690.047 kb on + strand, within ECD_02575at 2690.048 kb on - strand, within ECD_02575at 2690.048 kb on - strand, within ECD_02575at 2690.048 kb on - strand, within ECD_02575at 2690.048 kb on - strand, within ECD_02575at 2690.048 kb on - strand, within ECD_02575at 2690.048 kb on - strand, within ECD_02575at 2690.164 kb on + strand, within ECD_02575at 2690.164 kb on + strand, within ECD_02575at 2690.165 kb on - strand, within ECD_02575at 2690.165 kb on - strand, within ECD_02575at 2690.165 kb on - strand, within ECD_02575at 2690.165 kb on - strand, within ECD_02575at 2690.165 kb on - strand, within ECD_02575at 2690.165 kb on - strand, within ECD_02575at 2690.165 kb on - strand, within ECD_02575at 2690.165 kb on - strand, within ECD_02575at 2690.167 kb on + strand, within ECD_02575at 2690.167 kb on + strand, within ECD_02575at 2690.168 kb on - strand, within ECD_02575at 2690.168 kb on - strand, within ECD_02575at 2690.179 kb on - strand, within ECD_02575at 2690.187 kb on - strand, within ECD_02575at 2690.209 kb on + strand, within ECD_02575at 2690.209 kb on + strand, within ECD_02575at 2690.209 kb on + strand, within ECD_02575at 2690.210 kb on - strand, within ECD_02575at 2690.210 kb on - strand, within ECD_02575at 2690.210 kb on - strand, within ECD_02575at 2690.210 kb on - strand, within ECD_02575at 2690.210 kb on - strand, within ECD_02575at 2690.210 kb on - strand, within ECD_02575at 2690.210 kb on - strand, within ECD_02575at 2690.210 kb on - strand, within ECD_02575at 2690.210 kb on - strand, within ECD_02575at 2690.210 kb on - strand, within ECD_02575at 2690.323 kb on + strand, within ECD_02575at 2690.323 kb on + strand, within ECD_02575at 2690.324 kb on - strand, within ECD_02575at 2690.324 kb on - strand, within ECD_02575at 2690.324 kb on - strand, within ECD_02575at 2690.324 kb on - strand, within ECD_02575at 2690.324 kb on - strand, within ECD_02575at 2690.324 kb on - strand, within ECD_02575at 2690.324 kb on - strand, within ECD_02575at 2690.343 kb on + strand, within ECD_02575at 2690.369 kb on - strandat 2690.369 kb on - strandat 2690.369 kb on - strandat 2690.369 kb on - strandat 2690.386 kb on - strandat 2690.396 kb on + strandat 2690.396 kb on + strandat 2690.396 kb on + strandat 2690.397 kb on - strandat 2690.397 kb on - strandat 2690.586 kb on + strandat 2690.596 kb on + strandat 2690.596 kb on + strandat 2690.596 kb on + strandat 2690.596 kb on + strandat 2690.596 kb on + strandat 2690.596 kb on + strandat 2690.596 kb on + strandat 2690.597 kb on - strandat 2690.597 kb on - strandat 2690.597 kb on - strandat 2690.597 kb on - strandat 2690.597 kb on - strandat 2690.600 kb on + strandat 2690.624 kb on + strandat 2690.624 kb on + strandat 2690.691 kb on - strand, within ECD_02576at 2690.691 kb on - strand, within ECD_02576at 2690.793 kb on + strand, within ECD_02576at 2690.793 kb on + strand, within ECD_02576

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Per-strain Table

Position Strand Gene LocusTag Fraction EV152
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2,688,213 - ECD_02573 0.45 -0.1
2,688,213 - ECD_02573 0.45 -1.2
2,688,219 - ECD_02573 0.46 +0.1
2,688,229 + ECD_02573 0.46 +0.2
2,688,288 + ECD_02573 0.50 -1.7
2,688,315 - ECD_02573 0.51 +1.0
2,688,340 + ECD_02573 0.52 -0.9
2,688,341 - ECD_02573 0.52 -2.7
2,688,341 - ECD_02573 0.52 -0.7
2,688,379 + ECD_02573 0.55 -0.1
2,688,379 + ECD_02573 0.55 -0.2
2,688,379 + ECD_02573 0.55 +0.9
2,688,380 - ECD_02573 0.55 -2.0
2,688,380 - ECD_02573 0.55 +0.8
2,688,450 - ECD_02573 0.58 -0.4
2,688,471 + ECD_02573 0.60 -0.1
2,688,471 + ECD_02573 0.60 +0.2
2,688,472 - ECD_02573 0.60 -0.5
2,688,472 - ECD_02573 0.60 -1.1
2,688,472 - ECD_02573 0.60 -0.1
2,688,576 - ECD_02573 0.65 -0.3
2,688,648 - ECD_02573 0.69 -1.1
2,688,654 - ECD_02573 0.70 -0.3
2,688,813 + ECD_02573 0.78 +0.1
2,688,813 + ECD_02573 0.78 +1.5
2,688,814 - ECD_02573 0.78 +0.9
2,688,872 + ECD_02573 0.82 +0.6
2,688,873 - ECD_02573 0.82 -0.7
2,688,873 - ECD_02573 0.82 +0.7
2,688,873 - ECD_02573 0.82 -0.5
2,688,873 - ECD_02573 0.82 -0.5
2,688,929 - ECD_02573 0.85 +1.0
2,688,929 - ECD_02573 0.85 -0.2
2,688,963 - ECD_02573 0.87 -0.1
2,689,003 + ECD_02573 0.89 -1.9
2,689,003 + ECD_02573 0.89 -0.5
2,689,003 + ECD_02573 0.89 +1.7
2,689,003 + ECD_02573 0.89 +0.3
2,689,004 - ECD_02573 0.89 +0.4
2,689,004 - ECD_02573 0.89 -0.1
2,689,004 - ECD_02573 0.89 +0.8
2,689,004 - ECD_02573 0.89 +0.1
2,689,004 - ECD_02573 0.89 +0.6
2,689,004 - ECD_02573 0.89 -3.3
2,689,004 - ECD_02573 0.89 -0.3
2,689,004 - ECD_02573 0.89 -0.1
2,689,004 - ECD_02573 0.89 -2.1
2,689,004 - ECD_02573 0.89 -1.1
2,689,004 - ECD_02573 0.89 +0.6
2,689,050 + +0.2
2,689,050 + -1.3
2,689,051 - +0.9
2,689,051 - +1.9
2,689,051 - +1.0
2,689,051 - +0.0
2,689,051 - -0.6
2,689,075 + -0.9
2,689,075 + +0.7
2,689,075 + +0.1
2,689,076 - +2.0
2,689,076 - +1.2
2,689,076 - +0.9
2,689,076 - +2.0
2,689,076 - +1.6
2,689,076 - +1.1
2,689,076 - -1.2
2,689,083 - +0.2
2,689,083 - -0.5
2,689,119 + +0.9
2,689,211 - +0.4
2,689,211 - +0.7
2,689,283 - ECD_02574 0.13 +0.8
2,689,283 - ECD_02574 0.13 -0.7
2,689,283 - ECD_02574 0.13 -0.7
2,689,334 - ECD_02574 0.21 -1.4
2,689,378 + ECD_02574 0.28 -1.0
2,689,378 + ECD_02574 0.28 -1.3
2,689,378 + ECD_02574 0.28 +0.2
2,689,378 + ECD_02574 0.28 +0.3
2,689,378 + ECD_02574 0.28 -0.3
2,689,378 + ECD_02574 0.28 +1.5
2,689,378 + ECD_02574 0.28 -0.6
2,689,378 + ECD_02574 0.28 +0.5
2,689,379 - ECD_02574 0.28 +0.5
2,689,379 - ECD_02574 0.28 +0.3
2,689,379 - ECD_02574 0.28 -1.7
2,689,379 - ECD_02574 0.28 +1.1
2,689,379 - ECD_02574 0.28 +0.5
2,689,379 - ECD_02574 0.28 -0.5
2,689,412 - ECD_02574 0.34 +0.4
2,689,568 + ECD_02574 0.59 -0.6
2,689,569 - ECD_02574 0.59 -0.1
2,689,803 - +0.3
2,689,803 - -1.2
2,689,912 - +0.5
2,689,912 - -0.0
2,690,003 + ECD_02575 0.13 +0.5
2,690,011 + ECD_02575 0.15 -1.1
2,690,011 + ECD_02575 0.15 -0.9
2,690,011 + ECD_02575 0.15 +0.5
2,690,011 + ECD_02575 0.15 +2.2
2,690,011 + ECD_02575 0.15 +1.5
2,690,011 + ECD_02575 0.15 +0.3
2,690,011 + ECD_02575 0.15 +0.6
2,690,012 - ECD_02575 0.15 +1.5
2,690,012 - ECD_02575 0.15 -0.4
2,690,012 - ECD_02575 0.15 +0.1
2,690,012 - ECD_02575 0.15 +0.5
2,690,012 - ECD_02575 0.15 -0.6
2,690,012 - ECD_02575 0.15 -0.6
2,690,012 - ECD_02575 0.15 -0.5
2,690,012 - ECD_02575 0.15 +0.1
2,690,012 - ECD_02575 0.15 +0.8
2,690,012 - ECD_02575 0.15 +0.9
2,690,013 + ECD_02575 0.16 +0.8
2,690,013 + ECD_02575 0.16 -0.1
2,690,013 + ECD_02575 0.16 +0.5
2,690,013 + ECD_02575 0.16 +0.1
2,690,013 + ECD_02575 0.16 -0.7
2,690,013 + ECD_02575 0.16 +0.4
2,690,014 - ECD_02575 0.16 +0.3
2,690,014 - ECD_02575 0.16 -0.7
2,690,014 - ECD_02575 0.16 +1.5
2,690,014 - ECD_02575 0.16 -0.0
2,690,014 - ECD_02575 0.16 +0.6
2,690,014 - ECD_02575 0.16 -1.1
2,690,014 - ECD_02575 0.16 -1.0
2,690,014 - ECD_02575 0.16 -0.1
2,690,014 - ECD_02575 0.16 +0.6
2,690,014 - ECD_02575 0.16 +0.0
2,690,023 + ECD_02575 0.18 +0.6
2,690,047 + ECD_02575 0.23 +0.9
2,690,047 + ECD_02575 0.23 +0.1
2,690,047 + ECD_02575 0.23 -1.3
2,690,047 + ECD_02575 0.23 -0.1
2,690,047 + ECD_02575 0.23 -0.3
2,690,048 - ECD_02575 0.23 +0.4
2,690,048 - ECD_02575 0.23 -0.1
2,690,048 - ECD_02575 0.23 +0.3
2,690,048 - ECD_02575 0.23 -0.4
2,690,048 - ECD_02575 0.23 +0.2
2,690,048 - ECD_02575 0.23 +0.2
2,690,164 + ECD_02575 0.48 -0.1
2,690,164 + ECD_02575 0.48 +1.4
2,690,165 - ECD_02575 0.48 -0.7
2,690,165 - ECD_02575 0.48 +0.8
2,690,165 - ECD_02575 0.48 +1.1
2,690,165 - ECD_02575 0.48 -0.5
2,690,165 - ECD_02575 0.48 -0.1
2,690,165 - ECD_02575 0.48 +0.2
2,690,165 - ECD_02575 0.48 -0.7
2,690,165 - ECD_02575 0.48 -1.1
2,690,167 + ECD_02575 0.49 -0.9
2,690,167 + ECD_02575 0.49 -0.1
2,690,168 - ECD_02575 0.49 +0.6
2,690,168 - ECD_02575 0.49 +0.2
2,690,179 - ECD_02575 0.52 -1.1
2,690,187 - ECD_02575 0.53 -0.6
2,690,209 + ECD_02575 0.58 +0.6
2,690,209 + ECD_02575 0.58 -0.8
2,690,209 + ECD_02575 0.58 +0.9
2,690,210 - ECD_02575 0.58 +0.7
2,690,210 - ECD_02575 0.58 -0.3
2,690,210 - ECD_02575 0.58 -1.0
2,690,210 - ECD_02575 0.58 +0.9
2,690,210 - ECD_02575 0.58 -0.9
2,690,210 - ECD_02575 0.58 +1.9
2,690,210 - ECD_02575 0.58 -0.3
2,690,210 - ECD_02575 0.58 -0.2
2,690,210 - ECD_02575 0.58 -0.1
2,690,210 - ECD_02575 0.58 -0.6
2,690,323 + ECD_02575 0.83 -0.3
2,690,323 + ECD_02575 0.83 +0.3
2,690,324 - ECD_02575 0.83 -0.9
2,690,324 - ECD_02575 0.83 -0.1
2,690,324 - ECD_02575 0.83 +0.3
2,690,324 - ECD_02575 0.83 +0.9
2,690,324 - ECD_02575 0.83 -0.4
2,690,324 - ECD_02575 0.83 +1.1
2,690,324 - ECD_02575 0.83 -0.9
2,690,343 + ECD_02575 0.87 +0.6
2,690,369 - +0.5
2,690,369 - +0.9
2,690,369 - +0.1
2,690,369 - -0.1
2,690,386 - +0.5
2,690,396 + +0.9
2,690,396 + -0.7
2,690,396 + -1.1
2,690,397 - -0.7
2,690,397 - -0.6
2,690,586 + +1.1
2,690,596 + +0.8
2,690,596 + -0.9
2,690,596 + +0.5
2,690,596 + +0.7
2,690,596 + -1.3
2,690,596 + +1.7
2,690,596 + -0.5
2,690,597 - -0.6
2,690,597 - +0.1
2,690,597 - +0.2
2,690,597 - +0.1
2,690,597 - -0.4
2,690,600 + -0.1
2,690,624 + -0.1
2,690,624 + -0.5
2,690,691 - ECD_02576 0.22 +0.5
2,690,691 - ECD_02576 0.22 -0.5
2,690,793 + ECD_02576 0.51 +0.1
2,690,793 + ECD_02576 0.51 -0.0

Or see this region's nucleotide sequence