Experiment: EV152
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00995 and ECD_00996 are separated by 71 nucleotides ECD_00996 and ECD_00997 are separated by 82 nucleotides
ECD_00995: ECD_00995 - putative 4Fe-4S membrane protein, at 1,056,577 to 1,057,650
_00995
ECD_00996: ECD_00996 - hybrid sensory histidine kinase in two-component regulatory system with TorR, at 1,057,722 to 1,060,466
_00996
ECD_00997: ECD_00997 - periplasmic sensory protein associated with the TorRS two-component regulatory system, at 1,060,549 to 1,061,577
_00997
Position (kb)
1057
1058
1059
1060
1061 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1056.816 kb on + strand, within ECD_00995 at 1057.054 kb on - strand, within ECD_00995 at 1057.384 kb on + strand, within ECD_00995 at 1057.485 kb on - strand, within ECD_00995 at 1057.485 kb on - strand, within ECD_00995 at 1057.522 kb on - strand, within ECD_00995 at 1057.541 kb on - strand, within ECD_00995 at 1057.836 kb on + strand at 1058.409 kb on + strand, within ECD_00996 at 1058.574 kb on - strand, within ECD_00996 at 1058.720 kb on + strand, within ECD_00996 at 1058.725 kb on + strand, within ECD_00996 at 1058.816 kb on + strand, within ECD_00996 at 1058.886 kb on - strand, within ECD_00996 at 1059.183 kb on + strand, within ECD_00996 at 1060.036 kb on - strand, within ECD_00996 at 1060.317 kb on - strand at 1060.518 kb on - strand at 1060.720 kb on + strand, within ECD_00997 at 1060.738 kb on + strand, within ECD_00997 at 1060.941 kb on - strand, within ECD_00997 at 1061.143 kb on - strand, within ECD_00997 at 1061.151 kb on + strand, within ECD_00997
Per-strain Table
Position Strand Gene LocusTag Fraction EV152 remove 1,056,816 + ECD_00995 0.22 -1.1 1,057,054 - ECD_00995 0.44 +0.4 1,057,384 + ECD_00995 0.75 +0.0 1,057,485 - ECD_00995 0.85 +0.9 1,057,485 - ECD_00995 0.85 +0.3 1,057,522 - ECD_00995 0.88 +0.6 1,057,541 - ECD_00995 0.90 +0.6 1,057,836 + +0.7 1,058,409 + ECD_00996 0.25 +1.5 1,058,574 - ECD_00996 0.31 -0.1 1,058,720 + ECD_00996 0.36 +0.2 1,058,725 + ECD_00996 0.37 +0.1 1,058,816 + ECD_00996 0.40 +1.2 1,058,886 - ECD_00996 0.42 +0.4 1,059,183 + ECD_00996 0.53 +1.0 1,060,036 - ECD_00996 0.84 +0.3 1,060,317 - +2.5 1,060,518 - +0.3 1,060,720 + ECD_00997 0.17 +1.6 1,060,738 + ECD_00997 0.18 +2.0 1,060,941 - ECD_00997 0.38 +0.1 1,061,143 - ECD_00997 0.58 -1.9 1,061,151 + ECD_00997 0.59 +0.9
Or see this region's nucleotide sequence