Strain Fitness in Escherichia coli BL21 around ECD_00351

Experiment: EV152

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00350 and ECD_00351 are separated by 155 nucleotidesECD_00351 and ECD_00352 are separated by 4 nucleotidesECD_00352 and ECD_00353 are separated by 92 nucleotides ECD_00350: ECD_00350 - proline-specific permease, at 386,388 to 387,761 _00350 ECD_00351: ECD_00351 - maltodextrin glucosidase, at 387,917 to 389,734 _00351 ECD_00352: ECD_00352 - acyl carrier protein (ACP) phosphodiesterase; ACP hydrolyase, at 389,739 to 390,320 _00352 ECD_00353: ECD_00353 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase, at 390,413 to 391,483 _00353 Position (kb) 387 388 389 390Strain fitness (log2 ratio) -2 -1 0 1at 386.942 kb on + strand, within ECD_00350at 386.992 kb on + strand, within ECD_00350at 387.095 kb on + strand, within ECD_00350at 387.113 kb on + strand, within ECD_00350at 387.126 kb on + strand, within ECD_00350at 387.149 kb on + strand, within ECD_00350at 387.149 kb on + strand, within ECD_00350at 387.150 kb on - strand, within ECD_00350at 387.155 kb on + strand, within ECD_00350at 387.155 kb on + strand, within ECD_00350at 387.160 kb on - strand, within ECD_00350at 387.215 kb on + strand, within ECD_00350at 387.224 kb on + strand, within ECD_00350at 387.281 kb on + strand, within ECD_00350at 387.281 kb on + strand, within ECD_00350at 387.292 kb on + strand, within ECD_00350at 387.292 kb on + strand, within ECD_00350at 387.292 kb on + strand, within ECD_00350at 387.293 kb on - strand, within ECD_00350at 387.302 kb on - strand, within ECD_00350at 387.320 kb on + strand, within ECD_00350at 387.426 kb on + strand, within ECD_00350at 387.426 kb on + strand, within ECD_00350at 387.426 kb on + strand, within ECD_00350at 387.427 kb on - strand, within ECD_00350at 387.435 kb on + strand, within ECD_00350at 387.436 kb on - strand, within ECD_00350at 387.665 kb on + strandat 387.675 kb on + strandat 387.722 kb on + strandat 387.762 kb on + strandat 387.762 kb on + strandat 387.762 kb on + strandat 387.846 kb on + strandat 387.875 kb on + strandat 387.916 kb on + strandat 387.917 kb on - strandat 387.984 kb on + strandat 387.984 kb on + strandat 387.984 kb on + strandat 387.985 kb on - strandat 388.024 kb on + strandat 388.025 kb on - strandat 388.063 kb on - strandat 388.358 kb on + strand, within ECD_00351at 388.358 kb on + strand, within ECD_00351at 388.359 kb on - strand, within ECD_00351at 388.362 kb on - strand, within ECD_00351at 388.442 kb on + strand, within ECD_00351at 388.443 kb on - strand, within ECD_00351at 388.443 kb on - strand, within ECD_00351at 388.542 kb on + strand, within ECD_00351at 388.542 kb on + strand, within ECD_00351at 388.542 kb on + strand, within ECD_00351at 388.546 kb on + strand, within ECD_00351at 388.546 kb on + strand, within ECD_00351at 388.547 kb on - strand, within ECD_00351at 388.551 kb on - strand, within ECD_00351at 388.625 kb on - strand, within ECD_00351at 388.667 kb on - strand, within ECD_00351at 388.761 kb on - strand, within ECD_00351at 388.768 kb on + strand, within ECD_00351at 388.803 kb on - strand, within ECD_00351at 388.826 kb on + strand, within ECD_00351at 388.873 kb on + strand, within ECD_00351at 388.936 kb on + strand, within ECD_00351at 388.937 kb on - strand, within ECD_00351at 388.967 kb on - strand, within ECD_00351at 388.969 kb on + strand, within ECD_00351at 388.970 kb on - strand, within ECD_00351at 389.025 kb on - strand, within ECD_00351at 389.025 kb on - strand, within ECD_00351at 389.097 kb on - strand, within ECD_00351at 389.097 kb on - strand, within ECD_00351at 389.097 kb on - strand, within ECD_00351at 389.097 kb on - strand, within ECD_00351at 389.097 kb on - strand, within ECD_00351at 389.182 kb on + strand, within ECD_00351at 389.198 kb on - strand, within ECD_00351at 389.232 kb on + strand, within ECD_00351at 389.232 kb on + strand, within ECD_00351at 389.233 kb on - strand, within ECD_00351at 389.233 kb on - strand, within ECD_00351at 389.236 kb on + strand, within ECD_00351at 389.237 kb on - strand, within ECD_00351at 389.237 kb on - strand, within ECD_00351at 389.242 kb on + strand, within ECD_00351at 389.263 kb on + strand, within ECD_00351at 389.346 kb on + strand, within ECD_00351at 389.358 kb on - strand, within ECD_00351at 389.440 kb on + strand, within ECD_00351at 389.459 kb on + strand, within ECD_00351at 389.525 kb on + strand, within ECD_00351at 389.526 kb on - strand, within ECD_00351at 389.537 kb on - strand, within ECD_00351at 389.733 kb on - strandat 389.740 kb on + strandat 389.945 kb on - strand, within ECD_00352at 390.099 kb on - strand, within ECD_00352at 390.172 kb on - strand, within ECD_00352at 390.172 kb on - strand, within ECD_00352at 390.172 kb on - strand, within ECD_00352at 390.191 kb on + strand, within ECD_00352at 390.191 kb on + strand, within ECD_00352at 390.192 kb on - strand, within ECD_00352at 390.192 kb on - strand, within ECD_00352at 390.192 kb on - strand, within ECD_00352at 390.259 kb on - strand, within ECD_00352at 390.294 kb on + strandat 390.326 kb on - strandat 390.327 kb on + strandat 390.327 kb on + strandat 390.332 kb on + strandat 390.332 kb on + strandat 390.484 kb on + strandat 390.536 kb on - strand, within ECD_00353

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Per-strain Table

Position Strand Gene LocusTag Fraction EV152
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386,942 + ECD_00350 0.40 +0.3
386,992 + ECD_00350 0.44 +0.7
387,095 + ECD_00350 0.51 -0.3
387,113 + ECD_00350 0.53 +1.0
387,126 + ECD_00350 0.54 -0.5
387,149 + ECD_00350 0.55 -0.7
387,149 + ECD_00350 0.55 -0.4
387,150 - ECD_00350 0.55 -2.3
387,155 + ECD_00350 0.56 +0.6
387,155 + ECD_00350 0.56 -0.1
387,160 - ECD_00350 0.56 +0.0
387,215 + ECD_00350 0.60 +0.7
387,224 + ECD_00350 0.61 +0.7
387,281 + ECD_00350 0.65 +0.7
387,281 + ECD_00350 0.65 +0.6
387,292 + ECD_00350 0.66 +0.1
387,292 + ECD_00350 0.66 -0.2
387,292 + ECD_00350 0.66 +0.1
387,293 - ECD_00350 0.66 +0.6
387,302 - ECD_00350 0.67 +1.1
387,320 + ECD_00350 0.68 -0.7
387,426 + ECD_00350 0.76 +0.2
387,426 + ECD_00350 0.76 +0.5
387,426 + ECD_00350 0.76 -2.2
387,427 - ECD_00350 0.76 +0.0
387,435 + ECD_00350 0.76 -0.2
387,436 - ECD_00350 0.76 +0.1
387,665 + -0.8
387,675 + -0.2
387,722 + -0.5
387,762 + -0.2
387,762 + -0.1
387,762 + -1.1
387,846 + +0.4
387,875 + -0.5
387,916 + +0.7
387,917 - +1.0
387,984 + -0.3
387,984 + +0.9
387,984 + -1.0
387,985 - +0.9
388,024 + -2.1
388,025 - -0.3
388,063 - +1.0
388,358 + ECD_00351 0.24 -0.2
388,358 + ECD_00351 0.24 +0.3
388,359 - ECD_00351 0.24 +0.3
388,362 - ECD_00351 0.24 -0.1
388,442 + ECD_00351 0.29 -0.2
388,443 - ECD_00351 0.29 -0.3
388,443 - ECD_00351 0.29 +1.3
388,542 + ECD_00351 0.34 +0.2
388,542 + ECD_00351 0.34 -1.6
388,542 + ECD_00351 0.34 +1.3
388,546 + ECD_00351 0.35 +0.3
388,546 + ECD_00351 0.35 -0.2
388,547 - ECD_00351 0.35 -0.5
388,551 - ECD_00351 0.35 +0.6
388,625 - ECD_00351 0.39 -0.3
388,667 - ECD_00351 0.41 -0.3
388,761 - ECD_00351 0.46 -0.3
388,768 + ECD_00351 0.47 +1.1
388,803 - ECD_00351 0.49 +1.5
388,826 + ECD_00351 0.50 +1.0
388,873 + ECD_00351 0.53 -1.5
388,936 + ECD_00351 0.56 -0.1
388,937 - ECD_00351 0.56 +0.4
388,967 - ECD_00351 0.58 -0.6
388,969 + ECD_00351 0.58 -1.7
388,970 - ECD_00351 0.58 -1.7
389,025 - ECD_00351 0.61 +0.7
389,025 - ECD_00351 0.61 +0.1
389,097 - ECD_00351 0.65 +0.7
389,097 - ECD_00351 0.65 -0.5
389,097 - ECD_00351 0.65 -0.7
389,097 - ECD_00351 0.65 -0.6
389,097 - ECD_00351 0.65 +1.4
389,182 + ECD_00351 0.70 -0.1
389,198 - ECD_00351 0.70 +1.3
389,232 + ECD_00351 0.72 +0.4
389,232 + ECD_00351 0.72 -0.4
389,233 - ECD_00351 0.72 +1.2
389,233 - ECD_00351 0.72 -0.5
389,236 + ECD_00351 0.73 +0.2
389,237 - ECD_00351 0.73 -1.2
389,237 - ECD_00351 0.73 -0.2
389,242 + ECD_00351 0.73 +0.3
389,263 + ECD_00351 0.74 +0.4
389,346 + ECD_00351 0.79 +0.6
389,358 - ECD_00351 0.79 -1.5
389,440 + ECD_00351 0.84 +0.2
389,459 + ECD_00351 0.85 -0.3
389,525 + ECD_00351 0.88 -0.5
389,526 - ECD_00351 0.89 -0.2
389,537 - ECD_00351 0.89 +0.4
389,733 - -0.6
389,740 + -2.6
389,945 - ECD_00352 0.35 -0.3
390,099 - ECD_00352 0.62 +0.5
390,172 - ECD_00352 0.74 -0.1
390,172 - ECD_00352 0.74 +0.1
390,172 - ECD_00352 0.74 +0.1
390,191 + ECD_00352 0.78 +0.1
390,191 + ECD_00352 0.78 +0.1
390,192 - ECD_00352 0.78 +1.4
390,192 - ECD_00352 0.78 -0.9
390,192 - ECD_00352 0.78 +0.5
390,259 - ECD_00352 0.89 +0.3
390,294 + +0.8
390,326 - -1.1
390,327 + +0.9
390,327 + +0.8
390,332 + +0.6
390,332 + -0.3
390,484 + -1.9
390,536 - ECD_00353 0.11 -2.3

Or see this region's nucleotide sequence