Strain Fitness in Escherichia coli BL21 around ECD_04314

Experiment: Laval1257

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01346 and ECD_04314 are separated by 521 nucleotidesECD_04314 and ECD_01347 are separated by 265 nucleotidesECD_01347 and ECD_01348 are separated by 140 nucleotides ECD_01346: ECD_01346 - cold shock protein, Rac prophage, at 1,409,550 to 1,409,783 _01346 ECD_04314: ECD_04314 - hypothetical protein, at 1,410,305 to 1,410,478 _04314 ECD_01347: ECD_01347 - stress-induced protein, ATP-binding protein, at 1,410,744 to 1,411,178 _01347 ECD_01348: ECD_01348 - outer membrane pore protein N, non-specific, at 1,411,319 to 1,412,452 _01348 Position (kb) 1410 1411Strain fitness (log2 ratio) -1 0 1at 1410.271 kb on + strandat 1410.812 kb on - strand, within ECD_01347at 1411.039 kb on + strand, within ECD_01347

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Per-strain Table

Position Strand Gene LocusTag Fraction Laval1257
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1,410,271 + +0.4
1,410,812 - ECD_01347 0.16 +0.5
1,411,039 + ECD_01347 0.68 +1.6

Or see this region's nucleotide sequence